##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551465_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 388573 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.2468056195361 33.0 31.0 34.0 30.0 34.0 2 32.31289873460071 34.0 31.0 34.0 30.0 34.0 3 32.32928175658113 34.0 31.0 34.0 30.0 34.0 4 35.89973312607927 37.0 35.0 37.0 35.0 37.0 5 35.96224132917109 37.0 35.0 37.0 35.0 37.0 6 35.93917487833689 37.0 35.0 37.0 35.0 37.0 7 36.123580382579334 37.0 35.0 37.0 35.0 37.0 8 35.943989932393656 37.0 35.0 37.0 35.0 37.0 9 37.853250225826294 39.0 38.0 39.0 35.0 39.0 10 37.47620395652812 39.0 37.0 39.0 35.0 39.0 11 37.48256569550638 39.0 37.0 39.0 35.0 39.0 12 37.40802629107014 39.0 37.0 39.0 35.0 39.0 13 37.39233554570184 39.0 37.0 39.0 35.0 39.0 14 38.6262864378122 40.0 38.0 41.0 35.0 41.0 15 38.7203331162999 40.0 38.0 41.0 35.0 41.0 16 38.69767585498735 40.0 38.0 41.0 35.0 41.0 17 38.665836277867996 40.0 38.0 41.0 35.0 41.0 18 38.58755497679972 40.0 38.0 41.0 35.0 41.0 19 38.50820566534473 40.0 38.0 41.0 34.0 41.0 20 38.44745517573274 40.0 37.0 41.0 34.0 41.0 21 38.33561776036935 40.0 37.0 41.0 34.0 41.0 22 38.36581028532605 40.0 37.0 41.0 34.0 41.0 23 38.3301310178525 40.0 37.0 41.0 34.0 41.0 24 38.27764152424383 40.0 37.0 41.0 34.0 41.0 25 38.108553605114096 40.0 37.0 41.0 34.0 41.0 26 38.13932774536573 40.0 37.0 41.0 34.0 41.0 27 38.126835884119586 40.0 37.0 41.0 34.0 41.0 28 38.04817884927671 40.0 37.0 41.0 34.0 41.0 29 38.00193013925311 40.0 37.0 41.0 34.0 41.0 30 37.84651790011144 40.0 36.0 41.0 33.0 41.0 31 37.815164718083864 40.0 36.0 41.0 33.0 41.0 32 37.70037547642271 40.0 36.0 41.0 33.0 41.0 33 37.64019888154864 40.0 36.0 41.0 33.0 41.0 34 37.51448762523387 40.0 36.0 41.0 33.0 41.0 35 37.42256409992459 40.0 36.0 41.0 33.0 41.0 36 37.33689679931442 40.0 36.0 41.0 33.0 41.0 37 37.27883049002375 40.0 35.0 41.0 33.0 41.0 38 37.17432503030319 40.0 35.0 41.0 32.0 41.0 39 37.115128946169705 40.0 35.0 41.0 32.0 41.0 40 37.01614111119404 39.0 35.0 41.0 32.0 41.0 41 36.92172899300775 39.0 35.0 41.0 31.0 41.0 42 36.83176648917964 39.0 35.0 41.0 31.0 41.0 43 36.69370491516395 39.0 35.0 41.0 31.0 41.0 44 36.71179418024413 39.0 35.0 41.0 31.0 41.0 45 36.65599771471513 39.0 35.0 41.0 31.0 41.0 46 36.567162412210834 39.0 35.0 41.0 31.0 41.0 47 36.48941897661443 39.0 35.0 41.0 31.0 41.0 48 36.423933212034804 39.0 35.0 41.0 31.0 41.0 49 36.35944597282879 39.0 35.0 41.0 31.0 41.0 50 36.22521894212928 38.0 35.0 40.0 31.0 41.0 51 35.304002079403354 37.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 7.0 10 9.0 11 7.0 12 11.0 13 9.0 14 19.0 15 24.0 16 30.0 17 50.0 18 106.0 19 155.0 20 282.0 21 449.0 22 628.0 23 991.0 24 1383.0 25 1981.0 26 2709.0 27 3434.0 28 3783.0 29 4375.0 30 4961.0 31 6191.0 32 7945.0 33 10852.0 34 20137.0 35 28905.0 36 28198.0 37 43188.0 38 77796.0 39 139809.0 40 147.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.85334801954845 19.798596402735136 23.79166848957596 11.556387088140452 2 33.8829512086532 24.036152794970313 25.056553080116224 17.024342916260267 3 33.84228960838762 23.54924299938493 26.10577677810862 16.50269061411884 4 29.55223342846775 25.405007553278274 25.474235214489944 19.56852380376403 5 25.152287987070643 30.3621198590741 24.2862988421738 20.19929331168146 6 25.14971446806649 36.19345657058005 24.211666791053418 14.445162170300046 7 78.45527095294835 7.311882194594066 9.767276676454618 4.465570176002965 8 78.56413080682394 7.330668883324369 8.983382787790196 5.121817522061492 9 72.36735439672854 8.871434711109623 11.547379771625923 7.21383112053591 10 38.40899908125371 25.20350101525325 20.286535605922182 16.100964297570854 11 31.245094229398333 25.04239872559339 23.183288596994643 20.529218448013626 12 26.713127263088275 23.101708044563054 29.661093282343344 20.524071410005327 13 25.294603588000196 24.359129429991274 30.579839566825278 19.766427415183248 14 22.216674859035496 27.335404158292008 28.992235693164474 21.45568528950802 15 21.648184511018524 25.063244229527015 31.905459205863508 21.38311205359096 16 23.398177433841262 24.321041348729842 30.130245796800086 22.150535420628813 17 24.01324847583337 24.14218177794134 27.93889436476544 23.905675381459854 18 24.44662907613241 24.19802714033142 29.36024891075808 21.995094872778086 19 25.049347226904594 25.869785085427964 27.3336026949891 21.74726499267834 20 25.388794383552128 25.385706160747144 28.167422852334052 21.058076603366676 21 25.139935095850714 26.4308122283329 27.61668978544572 20.812562890370664 22 23.27928085584948 24.921443332398287 27.23580897283136 24.56346683892087 23 23.240163366986383 25.91688048320393 28.190069819570585 22.652886330239106 24 23.00056874769992 26.226217467502888 27.92087973173638 22.852334053060815 25 23.232700161874345 26.508789854158678 26.662686290606914 23.595823693360064 26 22.522408916728644 26.857759031121564 27.23297810192679 23.386853950222996 27 24.1210789221073 25.84636606249019 27.088346333893504 22.94420868150901 28 21.855352790852685 26.07257838295507 28.62550923507295 23.4465595911193 29 23.97696185787484 25.88779971845702 26.884780980665152 23.25045744300299 30 24.637069482439593 26.269967290573458 26.512650132664906 22.580313094322044 31 25.46008085996711 26.553054381030076 24.397989566953957 23.588875192048857 32 24.804605569609826 27.61257215503908 24.415746848082602 23.167075427268493 33 24.833428982456322 26.118901725029787 25.538573189593716 23.50909610292017 34 23.361633463982315 26.48717229452381 25.94518919224959 24.206005049244286 35 24.744899928713522 25.329860798357068 26.056879917029747 23.868359355899663 36 25.809564740730828 26.573385181162873 25.69246962604195 21.924580452064347 37 23.02784804914392 27.949960496483286 26.001034554639666 23.021156899733125 38 22.756341794205976 28.41164980582799 24.928391833709497 23.903616566256535 39 23.950969315932912 26.13408548715428 26.64956134368574 23.265383853227064 40 24.29736497389165 25.788204532996374 27.26797796038325 22.646452532728727 41 22.265057016313534 26.259930566457268 26.600921834507286 24.87409058272191 42 22.468622369541887 25.88368208805038 27.26617649708034 24.38151904532739 43 23.46817715075417 24.588172621360723 27.634447066574364 24.309203161310744 44 23.34670705375824 25.20375836715366 27.032500971503424 24.417033607584678 45 23.880197543318758 25.39677229246499 26.117614965527714 24.605415198688537 46 24.500158271418755 25.71280042617475 26.422576967519618 23.364464334886883 47 22.738069809276507 24.955671135153498 28.7541851852805 23.552073870289494 48 22.011050690603824 25.276588954971135 27.886909280881582 24.82545107354345 49 22.757885905608468 24.659459097775706 29.439513296085934 23.14314170052989 50 22.580827798122876 24.208835920148854 28.80900114006892 24.401335141659352 51 22.65468779354201 24.204460937841795 26.8788618869556 26.261989381660587 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 193.0 1 441.5 2 690.0 3 1817.0 4 2944.0 5 1977.5 6 1011.0 7 994.5 8 978.0 9 1000.0 10 1022.0 11 1007.0 12 992.0 13 1000.5 14 1009.0 15 986.5 16 964.0 17 899.5 18 835.0 19 961.0 20 1087.0 21 1159.0 22 1231.0 23 1301.5 24 1372.0 25 1964.5 26 3039.0 27 3521.0 28 4000.5 29 4480.0 30 5313.0 31 6146.0 32 6829.0 33 7512.0 34 7946.0 35 8380.0 36 9215.5 37 10051.0 38 10640.0 39 11229.0 40 13459.0 41 15689.0 42 17009.0 43 18329.0 44 19596.0 45 20863.0 46 23246.5 47 25630.0 48 29376.0 49 33122.0 50 34582.0 51 36042.0 52 35140.5 53 34239.0 54 30698.5 55 27158.0 56 24822.0 57 22486.0 58 21134.0 59 19782.0 60 18280.0 61 16778.0 62 15750.5 63 14723.0 64 12663.0 65 10603.0 66 9145.0 67 7687.0 68 6837.5 69 5988.0 70 5128.5 71 4269.0 72 3490.5 73 2712.0 74 2305.0 75 1615.5 76 1333.0 77 916.0 78 499.0 79 382.0 80 265.0 81 237.0 82 209.0 83 128.0 84 47.0 85 25.0 86 3.0 87 8.0 88 13.0 89 7.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 388573.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.06148953241712 #Duplication Level Percentage of deduplicated Percentage of total 1 72.04629337645764 23.819577743152067 2 8.43126757177874 5.5750052913874155 3 3.3327325765279565 3.3055530957967365 4 2.0676969382173125 2.734445627163304 5 1.4971565705202647 2.474911314232262 6 1.2900575502849243 2.559073451697642 7 1.1003653962694653 2.546580332141786 8 1.024427512653925 2.7095279589062278 9 0.924372491625957 2.750501831035132 >10 8.171550305008605 45.87407224332136 >50 0.07110447718920669 1.6272323877313273 >100 0.039068394060003675 2.8158172767536858 >500 0.0023441036436002206 0.42908921987962134 >1k 0.0015627357624001471 0.7786122268014322 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1837 0.4727554410625545 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1177 0.30290318678858286 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 567 0.14591852753536658 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 552 0.14205824902913997 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG 542 0.13948473002498885 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC 487 0.1253303755021579 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCC 471 0.12121274509551616 No Hit TATGAAAACTATGCCCTCGTGTACTCCTGCACCACCTTCTTCTGGCTCTTC 430 0.11066131717849671 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 407 0.10474222346894921 No Hit CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAAAAGA 402 0.10345546396687366 No Hit GAACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT 397 0.10216870446479812 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 395 0.1016540006639679 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.5735190041510864E-4 0.0 0.0 0.14900675034034788 0.0 2 2.5735190041510864E-4 0.0 0.0 0.7041147995357372 0.0 3 2.5735190041510864E-4 0.0 0.0 0.9537461429383925 0.0 4 2.5735190041510864E-4 0.0 0.0 1.4017958015610967 0.0 5 2.5735190041510864E-4 0.0 0.0 2.4458724615451923 0.0 6 2.5735190041510864E-4 0.0 0.0 3.023112774176281 0.0 7 2.5735190041510864E-4 0.0 0.0 3.5952060487990676 0.0 8 2.5735190041510864E-4 0.0 0.0 4.5263052245009305 0.0 9 2.5735190041510864E-4 0.0 0.0 4.912333075123593 0.0 10 2.5735190041510864E-4 0.0 0.0 5.865564514261155 0.0 11 2.5735190041510864E-4 0.0 0.0 6.966773296137405 0.0 12 2.5735190041510864E-4 0.0 0.0 7.929784107490741 0.0 13 2.5735190041510864E-4 0.0 0.0 8.309378160603027 0.0 14 2.5735190041510864E-4 0.0 0.0 8.453495224835487 0.0 15 2.5735190041510864E-4 0.0 0.0 8.749192558412448 0.0 16 2.5735190041510864E-4 0.0 0.0 9.34521955977384 0.0 17 2.5735190041510864E-4 0.0 0.0 9.995290460222403 0.0 18 2.5735190041510864E-4 0.0 0.0 10.739037452422068 0.0 19 2.5735190041510864E-4 0.0 0.0 11.138962305667146 0.0 20 2.5735190041510864E-4 0.0 0.0 11.54815182732717 0.0 21 2.5735190041510864E-4 0.0 0.0 12.02373813929429 0.0 22 2.5735190041510864E-4 0.0 0.0 12.517853788091298 0.0 23 2.5735190041510864E-4 0.0 0.0 13.034616404124836 0.0 24 2.5735190041510864E-4 0.0 0.0 13.464394077818067 0.0 25 5.147038008302173E-4 0.0 0.0 13.83935579672288 0.0 26 5.147038008302173E-4 0.0 0.0 14.185236750880787 0.0 27 5.147038008302173E-4 0.0 0.0 14.534205927843674 0.0 28 5.147038008302173E-4 0.0 0.0 14.9042779606406 0.0 29 5.147038008302173E-4 0.0 0.0 15.266372084524658 0.0 30 5.147038008302173E-4 0.0 0.0 15.669899864375548 0.0 31 5.147038008302173E-4 0.0 0.0 16.07857468223474 0.0 32 5.147038008302173E-4 0.0 0.0 16.467176051861554 0.0 33 5.147038008302173E-4 0.0 0.0 16.869159720309955 0.0 34 5.147038008302173E-4 0.0 0.0 17.265224295048807 0.0 35 5.147038008302173E-4 0.0 0.0 17.660259462185998 0.0 36 5.147038008302173E-4 0.0 0.0 18.035993236792056 0.0 37 5.147038008302173E-4 0.0 0.0 18.40040352777985 0.0 38 7.720557012453258E-4 0.0 0.0 18.77665200618674 0.0 39 7.720557012453258E-4 0.0 0.0 19.16551072771397 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGAGAG 30 2.161778E-6 45.000004 1 CGGAATC 20 7.027516E-4 45.0 19 GACCGTT 35 1.209155E-7 45.0 1 CGACAAT 25 3.8860235E-5 45.0 20 CGCTAGG 20 7.027516E-4 45.0 2 CGAATAT 40 6.7957444E-9 45.0 14 TTAACGG 25 3.8860235E-5 45.0 2 TCATCGA 25 3.8860235E-5 45.0 16 TTCATCG 25 3.8860235E-5 45.0 15 CCGTTAG 25 3.8860235E-5 45.0 1 GCACTAG 20 7.027516E-4 45.0 1 CCTCGTG 65 0.0 44.999996 15 CGAGGGT 60 3.6379788E-12 41.250004 4 CATACGA 55 6.002665E-11 40.909092 18 ACATACG 55 6.002665E-11 40.909092 17 CGAGATA 95 0.0 40.263157 19 CGTATGG 45 1.9226718E-8 40.0 2 ACGTAGG 45 1.9226718E-8 40.0 2 ACGGGCT 120 0.0 39.375004 5 GCGATAC 40 3.45035E-7 39.375 9 >>END_MODULE