SRR3551426_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551426_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	206728
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGC	1083	0.5238767849541426	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	993	0.48034131806044655	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCG	965	0.4667969505824078	No Hit
GAATCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTC	871	0.42132657404899193	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	684	0.3308695483920901	No Hit
GCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC	581	0.2810456251693046	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTT	337	0.16301613714639526	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCT	247	0.11948067025269919	No Hit
GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA	242	0.11706203320304943	No Hit
CCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC	224	0.1083549398243102	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CACTAGG	30	2.1568376E-6	45.000004	2
GCGTACG	35	1.2054625E-7	45.000004	1
CGAGTAA	20	7.0198515E-4	45.0	24
CGGCACT	45	3.8198777E-10	45.0	17
GCACGAT	20	7.0198515E-4	45.0	41
ATTGTCG	25	3.8796737E-5	45.0	11
GTTCGGG	50	2.1827873E-11	45.0	3
CGTGTAC	25	3.8796737E-5	45.0	18
TATAGCG	25	3.8796737E-5	45.0	1
CGCACGA	20	7.0198515E-4	45.0	40
GTGAAAC	25	3.8796737E-5	45.0	37
TGGCTAC	20	7.0198515E-4	45.0	41
GCCCGTG	25	3.8796737E-5	45.0	23
CCGCACG	20	7.0198515E-4	45.0	39
TACGGGA	80	0.0	42.1875	4
GGGACCG	70	0.0	41.785717	7
GACCGAT	55	6.002665E-11	40.909092	9
CGTTTTT	505	0.0	40.544556	1
TTTCGGC	50	1.0732037E-9	40.5	14
CATATCA	45	1.915214E-8	40.0	29