##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551426_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 206728 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.201820749970977 31.0 31.0 33.0 28.0 34.0 2 31.227356719941177 31.0 31.0 34.0 28.0 34.0 3 31.04648136682017 31.0 31.0 34.0 28.0 34.0 4 35.01092256491622 35.0 35.0 37.0 32.0 37.0 5 35.23451104833404 35.0 35.0 37.0 33.0 37.0 6 35.22447854185209 36.0 35.0 37.0 33.0 37.0 7 31.14966526063233 35.0 35.0 37.0 0.0 37.0 8 33.1388055802794 36.0 35.0 37.0 17.0 37.0 9 36.41212124143802 39.0 35.0 39.0 32.0 39.0 10 36.212883595836075 37.0 35.0 39.0 32.0 39.0 11 36.463164157733836 38.0 35.0 39.0 32.0 39.0 12 36.48349522077319 38.0 35.0 39.0 32.0 39.0 13 36.308202081962776 38.0 35.0 39.0 32.0 39.0 14 37.409615533454584 39.0 36.0 41.0 32.0 41.0 15 37.62621415579893 39.0 36.0 41.0 33.0 41.0 16 37.59518787972602 39.0 36.0 41.0 33.0 41.0 17 37.47506385201811 39.0 36.0 41.0 32.0 41.0 18 37.42025269919895 39.0 36.0 40.0 32.0 41.0 19 37.25079815022639 39.0 36.0 40.0 32.0 41.0 20 37.20173367903719 39.0 35.0 40.0 32.0 41.0 21 37.21496362369877 39.0 35.0 40.0 32.0 41.0 22 37.26620003095855 39.0 35.0 40.0 32.0 41.0 23 37.32838318950505 39.0 35.0 40.0 32.0 41.0 24 37.27721934135676 39.0 35.0 41.0 32.0 41.0 25 36.968272319182695 39.0 35.0 40.0 32.0 41.0 26 36.93322143105917 39.0 35.0 40.0 32.0 41.0 27 36.963846213381835 39.0 35.0 40.0 32.0 41.0 28 36.93016427382841 39.0 35.0 40.0 31.0 41.0 29 36.90903989783677 39.0 35.0 40.0 31.0 41.0 30 36.72398997716807 39.0 35.0 40.0 31.0 41.0 31 36.689722727448626 39.0 35.0 40.0 31.0 41.0 32 36.52019561936458 39.0 35.0 40.0 31.0 41.0 33 36.366138113850084 39.0 35.0 40.0 30.0 41.0 34 36.30835687473395 39.0 35.0 40.0 30.0 41.0 35 36.23842440308037 39.0 35.0 40.0 30.0 41.0 36 36.15219031771216 39.0 35.0 40.0 30.0 41.0 37 36.06898436593011 39.0 35.0 40.0 30.0 41.0 38 35.92549146704849 38.0 35.0 40.0 29.0 41.0 39 35.90227738864595 38.0 35.0 40.0 29.0 41.0 40 35.800646259819665 38.0 35.0 40.0 29.0 41.0 41 35.65629232614837 38.0 35.0 40.0 28.0 41.0 42 35.67978696644867 38.0 35.0 40.0 28.0 41.0 43 35.63525985836461 38.0 35.0 40.0 28.0 41.0 44 35.44964397662629 38.0 34.0 40.0 27.0 41.0 45 35.34378990751132 38.0 34.0 40.0 27.0 41.0 46 35.23222785495917 38.0 34.0 40.0 27.0 41.0 47 35.1989135482373 38.0 34.0 40.0 27.0 41.0 48 35.11594946016021 38.0 34.0 40.0 26.0 41.0 49 34.99512402770791 37.0 34.0 40.0 26.0 41.0 50 34.849222166324836 37.0 34.0 40.0 26.0 41.0 51 33.25580472891916 35.0 32.0 39.0 22.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 15.0 9 15.0 10 19.0 11 9.0 12 6.0 13 11.0 14 12.0 15 13.0 16 25.0 17 59.0 18 101.0 19 183.0 20 318.0 21 440.0 22 689.0 23 1022.0 24 1380.0 25 1949.0 26 2482.0 27 2930.0 28 3169.0 29 3754.0 30 4420.0 31 5728.0 32 7481.0 33 10603.0 34 16904.0 35 18512.0 36 19678.0 37 30392.0 38 40628.0 39 33776.0 40 4.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.697863859757746 19.178340621492975 22.32982469718664 13.793970821562631 2 32.24285050888124 26.30509655199102 23.91548314693704 17.536569792190704 3 32.95828334816764 24.006907627413803 27.9081691884989 15.126639835919661 4 29.01058395572927 25.180914051313803 27.362040942687976 18.446461050268955 5 26.671278201307995 29.689737239270926 24.86262141557989 18.77636314384118 6 25.92246817073643 36.55769900545644 24.0925273789714 13.427305444835728 7 69.12271196935103 17.69571611005766 9.867071707751247 3.31450021284006 8 79.34290468635115 7.570817692813746 9.29965945590341 3.7866181649316975 9 73.20537130915986 8.473453039743044 11.092836964513756 7.228338686583337 10 41.29339034867072 27.66001702720483 17.466429317750862 13.58016330637359 11 33.49957431987926 25.69076274137998 23.414825277659535 17.394837661081226 12 31.222185673929026 22.057002437986146 28.058124685577184 18.662687202507644 13 25.448415309005068 25.97664564064858 28.902229015904958 19.67271003444139 14 19.951820749970977 29.539298014782712 28.32707712549824 22.181804109748075 15 19.6146627452498 27.080027862698813 34.026353469292985 19.278955922758406 16 22.065709531364885 25.22057969892806 32.3874850044503 20.326225765256762 17 21.405905344220425 25.059014744011453 29.95240122286289 23.58267868890523 18 23.495124027707906 25.13302503773074 29.32403931736388 22.04781161719748 19 26.102898494640296 27.250783638404087 26.076777214504084 20.569540652451533 20 26.953775008707094 25.936012538214463 28.368677682752214 18.741534770326226 21 26.40619558066638 27.399771680662514 26.911206996633258 19.282825742037847 22 22.46720328160675 25.152374134127935 27.76256723810998 24.617855346155334 23 22.205023025424715 27.840447351108704 27.928969467125885 22.0255601563407 24 22.8991718586742 25.170272048295345 29.584768391316125 22.34578770171433 25 21.410258890909795 28.109883518439688 28.07166905305522 22.408188537595294 26 20.757226887504356 29.785515266437056 27.099376959096013 22.357880886962576 27 22.034267249719438 29.444003715026508 27.673561394682867 20.848167640571187 28 20.424906156882475 29.024128323207304 30.29294531945358 20.258020200456638 29 21.01215123253744 28.052319956658025 29.263573391122634 21.6719554196819 30 21.966061684919314 28.68551913625634 28.608606478077476 20.739812700746878 31 25.431001122247594 26.93249100267018 24.89938469873457 22.737123176347666 32 25.360860647807748 30.023992879532525 25.291687628187766 19.323458844471965 33 24.575771061491427 28.411729422235982 24.385182461979028 22.627317054293563 34 22.398513989396697 28.560233737084477 26.539704345807053 22.501547927711776 35 22.974633334623274 27.98653302890755 25.709144382957316 23.329689253511862 36 23.277446693239426 30.73071862544019 24.80215548933865 21.18967919198173 37 23.414825277659535 30.165725010642003 27.683719670291396 18.735730041407066 38 22.89723694903448 29.771487171549087 25.212356332959253 22.11891954645718 39 23.78923029294532 27.011338570488757 26.797531055299718 22.401900081266206 40 24.78474130258117 27.076158043419372 26.79994969234937 21.33915096165009 41 20.64113230912116 27.727255137185093 27.052939127742736 24.57867342595101 42 22.448821640029408 27.907685461088967 27.125498239232225 22.517994659649396 43 23.548817770210132 27.00166402229016 27.096958322046362 22.35255988545335 44 22.43527727255137 27.612611741031696 26.78301923300182 23.169091753415117 45 21.881409388181574 27.396385588793002 25.587728803064895 25.13447621996053 46 22.593456135598466 29.66603459618436 25.447447854185214 22.293061414031964 47 21.90898185054758 27.26529546070198 28.949150574668163 21.876572114082272 48 22.74970008900584 26.353469292984016 28.280155566735033 22.616675051275106 49 21.4378313532758 26.584207267520604 29.059440424132195 22.918520955071397 50 20.980225223482062 27.42395805115901 27.976374753299023 23.619441972059903 51 20.46989280600596 26.54502534731628 26.78930768933091 26.19577415734685 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 109.0 1 268.5 2 428.0 3 1246.5 4 2065.0 5 1462.5 6 860.0 7 820.5 8 781.0 9 745.0 10 709.0 11 726.0 12 743.0 13 710.0 14 677.0 15 657.5 16 638.0 17 663.5 18 689.0 19 630.5 20 572.0 21 665.0 22 758.0 23 820.0 24 882.0 25 995.5 26 1435.5 27 1762.0 28 2290.5 29 2819.0 30 3280.0 31 3741.0 32 4260.5 33 4780.0 34 5161.5 35 5543.0 36 6053.5 37 6564.0 38 6893.5 39 7223.0 40 8429.0 41 9635.0 42 11010.5 43 12386.0 44 13535.5 45 14685.0 46 17640.0 47 20595.0 48 19000.5 49 17406.0 50 16537.0 51 15668.0 52 14058.5 53 12449.0 54 11784.0 55 11119.0 56 10301.5 57 9484.0 58 9170.5 59 8857.0 60 8922.5 61 8988.0 62 8180.5 63 7373.0 64 6294.0 65 5215.0 66 4304.0 67 3393.0 68 2733.0 69 2073.0 70 1821.5 71 1570.0 72 1304.5 73 1039.0 74 868.0 75 487.5 76 278.0 77 225.5 78 173.0 79 137.0 80 101.0 81 68.5 82 36.0 83 28.0 84 20.0 85 15.5 86 11.0 87 14.5 88 18.0 89 11.5 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 206728.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.666673116365466 #Duplication Level Percentage of deduplicated Percentage of total 1 72.75711011351768 25.950040633102432 2 8.68539188694343 6.19558066638288 3 3.745948218572417 4.008165318679618 4 2.203897847639456 3.1442281645447157 5 1.544762860591594 2.754827599551101 6 1.159589329065683 2.481521612940676 7 0.9805650115958933 2.448144421655509 8 0.9371651770577625 2.674045122092798 9 0.7947594699795206 2.551178359970589 >10 7.101297926301656 42.42337757826709 >50 0.05289354834334694 1.2852637281838937 >100 0.02848114141564835 1.5793699934213072 >500 0.006781224146582941 1.980380016253241 >1k 0.0013562448293165882 0.5238767849541426 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGC 1083 0.5238767849541426 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 993 0.48034131806044655 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCG 965 0.4667969505824078 No Hit GAATCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTC 871 0.42132657404899193 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 684 0.3308695483920901 No Hit GCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC 581 0.2810456251693046 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTT 337 0.16301613714639526 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCT 247 0.11948067025269919 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 242 0.11706203320304943 No Hit CCTGTCTCTTATACACATCTGACGCAAGGACGATCGTATGCCGTCTTCTGC 224 0.1083549398243102 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.11512712356332959 0.0 2 0.0 0.0 0.0 0.6762509190820789 0.0 3 0.0 0.0 0.0 0.8349135095391045 0.0 4 0.0 0.0 0.0 1.116926589528269 0.0 5 0.0 0.0 0.0 2.0921210479470607 0.0 6 0.0 0.0 0.0 2.601486010603305 0.0 7 0.0 0.0 0.0 3.049901319608374 0.0 8 0.0 0.0 0.0 3.624569482605162 0.0 9 0.0 0.0 0.0 3.796292713130297 0.0 10 0.0 0.0 0.0 4.766166170039859 0.0 11 0.0 0.0 0.0 5.510138926512131 0.0 12 0.0 0.0 0.0 6.680759258542626 0.0 13 0.0 0.0 0.0 7.013563716574436 0.0 14 0.0 0.0 0.0 7.1702913973917415 0.0 15 0.0 0.0 0.0 7.452788204790837 0.0 16 0.0 0.0 0.0 7.894915057466816 0.0 17 0.0 0.0 0.0 8.394121744514532 0.0 18 0.0 0.0 0.0 8.96008281413258 0.0 19 0.0 0.0 0.0 9.259026353469293 0.0 20 0.0 0.0 0.0 9.593281993730892 0.0 21 0.0 0.0 0.0 9.977845284625207 0.0 22 0.0 0.0 0.0 10.383692581556442 0.0 23 0.0 0.0 0.0 10.775511783599706 0.0 24 0.0 0.0 0.0 11.098641693432917 0.0 25 0.0 0.0 0.0 11.414031964707249 0.0 26 0.0 0.0 0.0 11.702817228435432 0.0 27 0.0 0.0 0.0 11.993053674393407 0.0 28 0.0 0.0 0.0 12.27748539143222 0.0 29 0.0 0.0 0.0 12.582717387098022 0.0 30 0.0 0.0 0.0 12.918907936999343 0.0 31 0.0 0.0 0.0 13.249293757981503 0.0 32 0.0 0.0 0.0 13.573391122634574 0.0 33 0.0 0.0 0.0 13.864595023412406 0.0 34 0.0 0.0 0.0 14.182887659146317 0.0 35 0.0 0.0 0.0 14.499729112650439 0.0 36 0.0 0.0 0.0 14.810765837235401 0.0 37 0.0 0.0 0.0 15.136314384118261 0.0 38 0.0 0.0 0.0 15.453639565032313 0.0 39 0.0 0.0 0.0 15.81256530320034 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACTAGG 30 2.1568376E-6 45.000004 2 GCGTACG 35 1.2054625E-7 45.000004 1 CGAGTAA 20 7.0198515E-4 45.0 24 CGGCACT 45 3.8198777E-10 45.0 17 GCACGAT 20 7.0198515E-4 45.0 41 ATTGTCG 25 3.8796737E-5 45.0 11 GTTCGGG 50 2.1827873E-11 45.0 3 CGTGTAC 25 3.8796737E-5 45.0 18 TATAGCG 25 3.8796737E-5 45.0 1 CGCACGA 20 7.0198515E-4 45.0 40 GTGAAAC 25 3.8796737E-5 45.0 37 TGGCTAC 20 7.0198515E-4 45.0 41 GCCCGTG 25 3.8796737E-5 45.0 23 CCGCACG 20 7.0198515E-4 45.0 39 TACGGGA 80 0.0 42.1875 4 GGGACCG 70 0.0 41.785717 7 GACCGAT 55 6.002665E-11 40.909092 9 CGTTTTT 505 0.0 40.544556 1 TTTCGGC 50 1.0732037E-9 40.5 14 CATATCA 45 1.915214E-8 40.0 29 >>END_MODULE