##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551425_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 387815 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.20934981885693 31.0 31.0 33.0 30.0 34.0 2 31.23569485450537 31.0 31.0 34.0 28.0 34.0 3 31.02598919587948 31.0 31.0 34.0 28.0 34.0 4 34.97690909325323 35.0 35.0 37.0 32.0 37.0 5 35.20430101981615 35.0 35.0 37.0 33.0 37.0 6 35.16933073759395 36.0 35.0 37.0 32.0 37.0 7 31.000500238515787 35.0 35.0 37.0 0.0 37.0 8 32.978139061150294 35.0 35.0 37.0 17.0 37.0 9 36.1506465711744 39.0 35.0 39.0 32.0 39.0 10 36.129499890411665 37.0 35.0 39.0 32.0 39.0 11 36.35117517372974 37.0 35.0 39.0 32.0 39.0 12 36.40532470378918 38.0 35.0 39.0 32.0 39.0 13 36.247269961192835 38.0 35.0 39.0 32.0 39.0 14 37.40693371839666 39.0 36.0 40.0 32.0 41.0 15 37.51007568041463 39.0 36.0 41.0 32.0 41.0 16 37.571349741500455 39.0 36.0 41.0 33.0 41.0 17 37.351824968090455 39.0 36.0 41.0 32.0 41.0 18 37.27372587445045 39.0 36.0 40.0 32.0 41.0 19 37.06442762657453 39.0 35.0 40.0 32.0 41.0 20 36.97463997008883 39.0 35.0 40.0 31.0 41.0 21 37.116091435349325 39.0 35.0 40.0 32.0 41.0 22 37.16511738844552 39.0 35.0 40.0 32.0 41.0 23 37.242589894666274 39.0 35.0 40.0 32.0 41.0 24 37.139576860100824 39.0 35.0 40.0 32.0 41.0 25 36.91203537769297 39.0 35.0 40.0 31.0 41.0 26 36.773458994623724 39.0 35.0 40.0 31.0 41.0 27 36.838879362582674 39.0 35.0 40.0 31.0 41.0 28 36.80047703157433 39.0 35.0 40.0 31.0 41.0 29 36.73105217694003 39.0 35.0 40.0 31.0 41.0 30 36.54838518365715 39.0 35.0 40.0 31.0 41.0 31 36.55371246599538 39.0 35.0 40.0 31.0 41.0 32 36.3782009463275 38.0 35.0 40.0 30.0 41.0 33 36.07989634232817 38.0 35.0 40.0 30.0 41.0 34 36.025501850108945 38.0 35.0 40.0 30.0 41.0 35 36.01310418627438 38.0 35.0 40.0 29.0 41.0 36 35.93118368294161 38.0 35.0 40.0 29.0 41.0 37 35.950561479055736 38.0 35.0 40.0 29.0 41.0 38 35.66950736820391 38.0 35.0 40.0 28.0 41.0 39 35.69771153771772 38.0 35.0 40.0 28.0 41.0 40 35.48391630029782 38.0 35.0 40.0 27.0 41.0 41 35.40243930740173 38.0 34.0 40.0 27.0 41.0 42 35.510055052022224 38.0 35.0 40.0 27.0 41.0 43 35.464082101001765 38.0 35.0 40.0 27.0 41.0 44 35.319869009708235 38.0 34.0 40.0 27.0 41.0 45 35.2447584544177 38.0 34.0 40.0 26.0 41.0 46 35.123339736730145 38.0 34.0 40.0 26.0 41.0 47 35.01615460980106 38.0 34.0 40.0 26.0 41.0 48 34.98037724172608 37.0 34.0 40.0 26.0 41.0 49 34.873032244755876 37.0 34.0 40.0 26.0 41.0 50 34.723824503951626 37.0 34.0 40.0 25.0 41.0 51 33.0298647551023 35.0 31.0 39.0 20.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 2.0 8 19.0 9 44.0 10 45.0 11 24.0 12 17.0 13 25.0 14 21.0 15 29.0 16 57.0 17 114.0 18 225.0 19 409.0 20 703.0 21 1043.0 22 1524.0 23 2052.0 24 2823.0 25 3955.0 26 4997.0 27 5739.0 28 6199.0 29 7185.0 30 8672.0 31 10979.0 32 14826.0 33 20858.0 34 32046.0 35 34895.0 36 38093.0 37 56166.0 38 74245.0 39 59781.0 40 2.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.33136933847324 18.054484741435996 20.933692611167697 14.68045330892307 2 31.13469050965022 28.94240810695822 23.235563348503796 16.68733803488777 3 31.124376313448423 27.941157510668745 25.902298776478478 15.032167399404356 4 27.885202996273996 22.926653172259968 31.225455436226035 17.962688395239997 5 28.635818624859795 27.2034346273352 24.159457473279787 20.001289274525224 6 24.454959194461274 37.25513453579671 25.06323891546227 13.226667354279748 7 64.65273390663074 17.548315562832794 14.033237497260293 3.7657130332761755 8 73.76790479996906 10.01302167270477 11.357219292703997 4.861854234622178 9 68.53009811379137 7.689748978249939 12.21458685197839 11.5655660559803 10 41.440635354486034 23.74766318992303 20.224075912484047 14.587625543106894 11 33.14750589843095 24.87139486610884 24.59600582752085 17.385093407939355 12 30.533630725990484 20.83777058649098 29.13193146216624 19.496667225352294 13 24.297151992573777 24.07900674290577 32.38631821873831 19.237523045782137 14 20.06652656550159 29.064115622139425 28.436496783260058 22.432861029098927 15 18.601910704846382 25.431197864961387 36.83715173471887 19.129739695473358 16 21.858618155563864 23.981537588798783 31.465776207727913 22.69406804790944 17 20.951484599615796 24.656343875301367 31.00137952374199 23.390792001340845 18 22.284852313603135 25.96624679292962 30.11203795624202 21.636862937225224 19 24.396426131016078 27.26841406340652 26.512641336719827 21.822518468857574 20 26.73439655505847 24.49337957531297 30.044479971120253 18.727743898508308 21 25.013730773693645 28.265796836120316 27.551280894240808 19.16919149594523 22 22.66209403968387 23.576447532973198 28.654899887833118 25.106558539509816 23 22.94960225880897 28.122171654010288 28.955300852210463 19.972925234970283 24 24.36883565617627 23.738896123151505 28.19385531761278 23.69841290305945 25 22.045305106816397 29.31397702512796 26.86358186248598 21.777136005569666 26 20.95277387414102 27.206013176385646 28.09458117917048 23.74663177030285 27 23.893866921083507 28.064154300375176 26.234158039271303 21.807820739270014 28 19.18981988834883 28.067506414140762 31.272642883849255 21.470030813661154 29 23.705632840400707 26.598764875004832 28.744633394788753 20.950968889805708 30 23.787372845299952 26.170725732630252 29.86191869834844 20.179982723721363 31 25.169217281435735 27.249590655338242 25.016567177649137 22.564624885576887 32 27.265835514356073 28.242332039761227 25.17695292858708 19.31487951729562 33 23.636012016038574 25.76924564547529 27.145159418795046 23.44958291969109 34 24.45470133955623 27.966943001173238 27.137423771643697 20.44093188762683 35 23.952399984528704 25.108363523845135 25.98429663628276 24.954939855343397 36 22.890295630648634 30.72470121062878 26.37520467233088 20.00979848639171 37 26.442246947642563 27.028609001714738 26.876990317548316 19.652153733094387 38 21.799053672498488 28.7982672150381 26.424197104289416 22.978482008174 39 27.48707502288462 24.22443690935111 26.75012570426621 21.53836236349806 40 23.23839975245929 23.575673968258062 30.54858631048309 22.637339968799555 41 21.488854221729433 26.39454379020925 29.381019300439643 22.735582687621676 42 21.811946417750733 25.437902092492553 29.27684591880149 23.473305570955226 43 24.03594497376326 24.509624434330803 27.81790286605727 23.636527725848666 44 23.144024857212848 25.785748359398163 28.34805255082965 22.72217423255934 45 23.06357412683883 23.93125588231502 27.07760143367327 25.92756855717288 46 24.39410543687067 27.719144437425058 26.17227286206052 21.714477263643747 47 21.28850096050952 26.162732230573855 31.77984348207264 20.768923326843986 48 23.541894975697176 25.15632453618349 27.577839949460436 23.723940538658898 49 21.229710042159276 24.263888709822982 31.346905096502198 23.159496151515544 50 21.311707901963565 24.622049172930392 29.682451684437165 24.383791240668877 51 20.95947810167219 24.74478810773178 26.83547567783608 27.46025811275995 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 163.0 1 568.5 2 974.0 3 2915.5 4 4857.0 5 3369.5 6 1882.0 7 1758.0 8 1634.0 9 1555.5 10 1477.0 11 1428.0 12 1379.0 13 1298.0 14 1217.0 15 1178.0 16 1139.0 17 1106.5 18 1074.0 19 1191.5 20 1309.0 21 1245.5 22 1182.0 23 1465.5 24 1749.0 25 1914.0 26 2358.0 27 2637.0 28 3493.0 29 4349.0 30 5181.5 31 6014.0 32 7033.5 33 8053.0 34 9149.5 35 10246.0 36 10962.0 37 11678.0 38 12542.5 39 13407.0 40 14956.0 41 16505.0 42 18428.0 43 20351.0 44 22545.0 45 24739.0 46 36445.0 47 48151.0 48 39007.5 49 29864.0 50 28985.0 51 28106.0 52 25482.0 53 22858.0 54 21577.0 55 20296.0 56 20110.0 57 19924.0 58 18972.0 59 18020.0 60 17931.5 61 17843.0 62 16366.5 63 14890.0 64 12281.0 65 9672.0 66 7872.0 67 6072.0 68 5084.5 69 4097.0 70 3470.0 71 2843.0 72 2517.0 73 2191.0 74 1727.0 75 1057.0 76 851.0 77 609.5 78 368.0 79 295.5 80 223.0 81 154.5 82 86.0 83 68.5 84 51.0 85 37.0 86 23.0 87 17.5 88 12.0 89 9.0 90 6.0 91 6.5 92 7.0 93 5.0 94 3.0 95 1.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 387815.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.874528707860694 #Duplication Level Percentage of deduplicated Percentage of total 1 70.43412419389608 18.92883892661886 2 9.432012261379098 5.069617685826533 3 3.941870800653377 3.1780775998451105 4 2.3821559640892325 2.560772753740706 5 1.7134465714709612 2.3024034537190916 6 1.284454172685071 2.071146032265384 7 0.9812744053868276 1.8459901024500065 8 0.7549010567272963 1.6230088096489685 9 0.6681419728387441 1.6160400566983357 >10 8.101469993659292 47.38534534011286 >50 0.2423260962638645 3.9977557733027544 >100 0.05085856341340366 2.4645278602461707 >500 0.0069805871351730515 1.2062679315972178 >1k 0.0039889069343846005 2.6537358495169183 >5k 0.0019944534671923002 3.096471824411076 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG 6170 1.5909647641272255 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 5384 1.3882908087619097 No Hit GAATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 4710 1.214496602761626 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2514 0.648247231282957 No Hit GCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC 1522 0.3924551654783853 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCT 1156 0.29808027023194045 No Hit GAACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCT 823 0.21221458685197842 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTC 753 0.19416474349883323 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTA 706 0.18204556296172145 No Hit GAGGAGCTGAGAACCCCAGTCTAATAATGTCCATCGACACCTCCTTATCCC 603 0.15548650774209352 No Hit GAATGAAACCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCG 573 0.1477508605907456 No Hit GAATGAAACGGCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGC 528 0.13614738986372368 No Hit GAATCTATCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTC 515 0.13279527609813957 No Hit CCTGTCTCTTATACACATCTGACGCAGAGTGCTTCGTATGCCGTCTTCTGC 392 0.10107912277761305 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 391 0.1008212678725681 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08277142451942292 0.0 2 0.0 0.0 0.0 0.7248301380813017 0.0 3 0.0 0.0 0.0 0.8612353828500703 0.0 4 0.0 0.0 0.0 1.259363356239444 0.0 5 0.0 0.0 0.0 3.032889393138481 0.0 6 0.0 0.0 0.0 3.4083261348839007 0.0 7 0.0 0.0 0.0 3.9753490710777046 0.0 8 0.0 0.0 0.0 4.642419710428942 0.0 9 0.0 0.0 0.0 4.819566030194809 0.0 10 0.0 0.0 0.0 7.025514742854196 0.0 11 0.0 0.0 0.0 7.616002475407089 0.0 12 0.0 0.0 0.0 9.715457112282918 0.0 13 0.0 0.0 0.0 10.00734886479378 0.0 14 0.0 0.0 0.0 10.162319662725784 0.0 15 0.0 0.0 0.0 10.567409718551371 0.0 16 0.0 0.0 0.0 10.950066397638048 0.0 17 0.0 0.0 0.0 11.363407810425073 0.0 18 0.0 0.0 0.0 11.814653894253704 0.0 19 0.0 0.0 0.0 12.139293219705271 0.0 20 0.0 0.0 0.0 12.416229387723527 0.0 21 0.0 0.0 0.0 12.735711615074198 0.0 22 0.0 0.0 0.0 13.071180846537652 0.0 23 0.0 0.0 0.0 13.394015187653908 0.0 24 0.0 0.0 0.0 13.654190786844243 0.0 25 0.0 0.0 0.0 13.880587393473693 0.0 26 0.0 0.0 0.0 14.11059396877377 0.0 27 0.0 0.0 0.0 14.365612469863208 0.0 28 0.0 0.0 0.0 14.619083841522375 0.0 29 0.0 0.0 0.0 14.863272436599924 0.0 30 0.0 0.0 0.0 15.171151193223572 0.0 31 0.0 0.0 0.0 15.438031019945077 0.0 32 0.0 0.0 0.0 15.686345293503345 0.0 33 0.0 0.0 0.0 15.944973763263413 0.0 34 0.0 0.0 0.0 16.21572141356059 0.0 35 0.0 0.0 0.0 16.50451890721091 0.0 36 0.0 0.0 0.0 16.787385738045202 0.0 37 0.0 0.0 0.0 17.089333831852816 0.0 38 0.0 0.0 0.0 17.363433595915577 0.0 39 0.0 0.0 0.0 17.663318850482835 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCTAGG 20 7.027498E-4 45.000004 28 CCAATCC 20 7.027498E-4 45.000004 32 TCTAGAC 20 7.027498E-4 45.000004 28 GCGATAA 20 7.027498E-4 45.000004 9 TCATCGT 20 7.027498E-4 45.000004 17 TTACCGG 40 6.7957444E-9 45.000004 2 CACTTCG 20 7.027498E-4 45.000004 31 ACCGTTA 25 3.8860097E-5 45.0 43 CGATCAA 25 3.8860097E-5 45.0 10 GACGGGA 85 0.0 42.35294 4 ACACGGG 70 0.0 41.785713 3 AACGGCT 70 0.0 41.785713 7 GCTACGA 70 0.0 41.785713 10 TACGGCT 655 0.0 41.564884 7 CGAATAT 65 0.0 41.538464 14 CGGGATA 55 6.002665E-11 40.909092 6 TTAGCGG 50 1.0768417E-9 40.5 2 CGTTTTT 1240 0.0 40.463707 1 ACGGCTG 750 0.0 40.199997 8 CACGGGT 45 1.9226718E-8 40.0 4 >>END_MODULE