SRR3551411_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551411_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	201625
Sequences flagged as poor quality	0
Sequence length	51
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1129	0.5599504029758215	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGATGGT	25	3.87933E-5	45.000004	10
ACAACGA	20	7.019437E-4	45.0	13
CATGGGT	40	6.7666406E-9	45.0	4
TTTCGCA	20	7.019437E-4	45.0	14
ACGTAGG	20	7.019437E-4	45.0	2
CGACTGG	20	7.019437E-4	45.0	2
CACAACG	20	7.019437E-4	45.0	12
CGTTTTT	400	0.0	42.750004	1
TACGGGA	70	0.0	41.785713	4
TATGGGC	55	6.002665E-11	40.909092	4
CGTTTTA	95	0.0	40.263157	1
TACGGGT	35	6.2226954E-6	38.571426	4
GGCGATA	70	0.0	38.571426	8
ACGGGAT	65	9.094947E-12	38.07692	5
ACGGGAG	65	9.094947E-12	38.07692	5
TTAGCGG	30	1.136586E-4	37.499996	2
TAACGGG	30	1.136586E-4	37.499996	3
CGCCCAA	85	0.0	37.058823	37
ATTTCCG	85	0.0	37.058823	32
TTGCGGG	110	0.0	36.81818	3