SRR3551403_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551403_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	219919
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	396	0.18006629713667305	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTACC	20	7.020836E-4	45.0	7
CAACGAC	25	3.880488E-5	45.0	12
CGCGCAA	25	3.880488E-5	45.0	18
GCGCAAT	25	3.880488E-5	45.0	19
GTATGCG	20	7.020836E-4	45.0	1
CGCAATC	25	3.880488E-5	45.0	20
ACGACGC	25	3.880488E-5	45.0	14
CGAAGTC	20	7.020836E-4	45.0	26
GCGATTG	60	0.0	44.999996	9
ACGGGGC	60	3.6379788E-12	41.249996	5
TTAGCGG	55	6.002665E-11	40.909092	2
ACGGGAT	40	3.441237E-7	39.375	5
AACACGT	35	6.225273E-6	38.571426	41
CGTGGAA	30	1.1369223E-4	37.499996	25
CGACGCG	30	1.1369223E-4	37.499996	15
CACGACC	30	1.1369223E-4	37.499996	27
CGTTCAT	30	1.1369223E-4	37.499996	17
CATACGA	30	1.1369223E-4	37.499996	18
GCGATGC	30	1.1369223E-4	37.499996	9
GCTAGCG	30	1.1369223E-4	37.499996	1