SRR3551391_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551391_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	182065
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	323	0.17740916705572185	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	244	0.1340180704693379	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTTTA	30	2.1554115E-6	45.000004	1
CCTACTC	20	7.017635E-4	45.0	32
CGACAAT	20	7.017635E-4	45.0	20
ATATACT	55	1.8189894E-12	45.0	17
ACCACTA	25	3.877838E-5	45.0	22
TCATCGA	20	7.017635E-4	45.0	16
CCGGTAT	20	7.017635E-4	45.0	27
TTCATCG	25	3.877838E-5	45.0	15
TATACTG	55	1.8189894E-12	45.0	18
TCGACAA	20	7.017635E-4	45.0	19
GAATATA	60	3.6379788E-12	41.250004	15
CGAATAT	60	3.6379788E-12	41.250004	14
TAGGGCG	50	1.0713848E-9	40.5	5
CGTTAGG	35	6.2193667E-6	38.571426	2
CGTTTTT	165	0.0	38.181816	1
TACGAAT	65	9.094947E-12	38.07692	12
AGCTACG	65	9.094947E-12	38.07692	9
GGGTCTC	30	1.1361517E-4	37.500004	7
CGTTGAT	30	1.1361517E-4	37.500004	25
ATCGTTG	30	1.1361517E-4	37.500004	23