##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551385_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 967514 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.97109602548387 33.0 31.0 34.0 30.0 34.0 2 32.01060759844302 33.0 31.0 34.0 30.0 34.0 3 32.05029487945394 33.0 31.0 34.0 30.0 34.0 4 35.72921735499435 37.0 35.0 37.0 33.0 37.0 5 34.82183720338931 37.0 35.0 37.0 33.0 37.0 6 35.28234113408178 37.0 35.0 37.0 33.0 37.0 7 35.80732165115957 37.0 35.0 37.0 35.0 37.0 8 35.72910262797231 37.0 35.0 37.0 35.0 37.0 9 37.59131444092799 39.0 37.0 39.0 35.0 39.0 10 37.329054670009945 39.0 37.0 39.0 34.0 39.0 11 37.293853112203024 39.0 37.0 39.0 34.0 39.0 12 37.22326912065355 39.0 37.0 39.0 34.0 39.0 13 37.11862257290334 39.0 37.0 39.0 33.0 39.0 14 38.23213617580728 40.0 37.0 41.0 33.0 41.0 15 38.27034337487623 40.0 37.0 41.0 34.0 41.0 16 38.342089106720934 40.0 37.0 41.0 34.0 41.0 17 38.26190732123773 40.0 37.0 41.0 34.0 41.0 18 38.264740355178326 40.0 37.0 41.0 34.0 41.0 19 38.22169498322505 40.0 37.0 41.0 34.0 41.0 20 38.17270241050775 40.0 37.0 41.0 34.0 41.0 21 38.16155321783457 40.0 37.0 41.0 34.0 41.0 22 38.195418360871265 40.0 37.0 41.0 34.0 41.0 23 38.19786070279086 40.0 37.0 41.0 34.0 41.0 24 38.139780923066745 40.0 37.0 41.0 34.0 41.0 25 38.01378274629618 40.0 37.0 41.0 34.0 41.0 26 38.01103756638147 40.0 37.0 41.0 34.0 41.0 27 38.004964269250884 40.0 37.0 41.0 34.0 41.0 28 37.91445085032361 40.0 36.0 41.0 33.0 41.0 29 37.901326492433185 40.0 36.0 41.0 34.0 41.0 30 37.79295493398545 40.0 36.0 41.0 33.0 41.0 31 37.77241362915679 40.0 36.0 41.0 33.0 41.0 32 37.70642905425658 40.0 36.0 41.0 33.0 41.0 33 37.58069340598689 40.0 36.0 41.0 33.0 41.0 34 37.489547438073245 40.0 36.0 41.0 33.0 41.0 35 37.487206386677606 40.0 36.0 41.0 33.0 41.0 36 37.42739123154807 40.0 36.0 41.0 33.0 41.0 37 37.37719350831099 40.0 36.0 41.0 33.0 41.0 38 37.2866976601889 40.0 36.0 41.0 33.0 41.0 39 37.23720897061955 40.0 35.0 41.0 33.0 41.0 40 37.129463759697536 39.0 35.0 41.0 32.0 41.0 41 37.021557310798606 39.0 35.0 41.0 32.0 41.0 42 37.091175941640124 39.0 35.0 41.0 32.0 41.0 43 36.96483565095699 39.0 35.0 41.0 32.0 41.0 44 36.87805241061111 39.0 35.0 41.0 31.0 41.0 45 36.854459987142306 39.0 35.0 41.0 31.0 41.0 46 36.71362791649526 39.0 35.0 41.0 31.0 41.0 47 36.60024557784177 39.0 35.0 41.0 31.0 41.0 48 36.572482672085364 39.0 35.0 41.0 31.0 41.0 49 36.60065384066794 39.0 35.0 41.0 31.0 41.0 50 36.46900509966781 39.0 35.0 41.0 31.0 41.0 51 35.279552543942515 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 15.0 10 24.0 11 33.0 12 13.0 13 12.0 14 20.0 15 23.0 16 50.0 17 91.0 18 179.0 19 354.0 20 716.0 21 1159.0 22 2031.0 23 2938.0 24 3764.0 25 4842.0 26 6238.0 27 7333.0 28 8504.0 29 10418.0 30 13197.0 31 17467.0 32 23361.0 33 33021.0 34 56968.0 35 75107.0 36 71489.0 37 105717.0 38 188781.0 39 333449.0 40 197.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.79003507959575 20.332935750800505 22.349960827440224 11.527068342163524 2 30.46178143158652 29.606910080887715 22.212805189382273 17.71850329814349 3 30.079771455503483 28.352561306606418 25.556529414561442 16.011137823328657 4 27.8020783161794 23.587358942609615 29.678536951403288 18.932025789807692 5 27.249011383814604 29.36236581589517 23.583638066219198 19.80498473407103 6 24.353652763680937 36.464175195397694 24.723466533817597 14.458705507103772 7 72.24618971921853 7.106047044280496 14.830999861500713 5.816763375000258 8 70.41231444712945 10.493078136337045 11.804790421637309 7.2898169948961975 9 63.73117081509931 9.019197655021012 14.032975233433314 13.216656296446356 10 37.31274172776828 24.288640784526116 22.291667097323657 16.106950390381947 11 30.148711026403753 24.95188700111833 25.29834193613736 19.60106003634056 12 26.201791395266632 21.0768009558518 30.80151811756729 21.919889531314276 13 23.038116244312743 24.406675252244412 33.701321117833956 18.853887385608893 14 19.177086843187798 29.53848729837501 28.759377125292247 22.52504873314495 15 17.53297626701009 25.069508038126582 37.26540391146795 20.13211178339538 16 18.938330608135903 25.608104895639755 30.345193971353385 25.10837052487096 17 18.20779854348361 25.985670491589786 31.273139200052917 24.533391764873684 18 19.236724223112017 26.28964542115153 30.964513175003148 23.509117180733302 19 20.794117707857456 27.608696101555118 27.866263433914135 23.73092275667329 20 23.308913359393248 26.65532488418772 30.38209266222504 19.653669094193983 21 21.87430879553164 29.499831526985652 28.82955698832265 19.796302689160054 22 18.648515680393256 26.07765882457515 28.389046566768027 26.884778928263568 23 20.331695458670364 27.46771622942924 28.864181810289054 23.336406501611346 24 22.384585649406624 24.836436475337827 28.16217646462997 24.616801410625584 25 19.42421505011814 29.685771988829103 26.70814065739617 24.181872303656586 26 18.887892061510218 26.552173922031102 30.166281831580733 24.393652184877944 27 21.900251572587063 26.477446321190186 28.827076404062367 22.795225702160383 28 18.411103095149013 26.613051594085462 31.69752582391573 23.278319486849803 29 20.785332305268966 22.98250981381148 32.89265064898286 23.339507231936697 30 20.128907695392524 25.576684161676212 31.572773107159176 22.721635035772092 31 23.780431084201364 24.803155303179075 26.190111977707815 25.226301634911742 32 22.116682549296442 25.755182870738818 29.121335711938016 23.006798868026713 33 20.430402040693984 23.357078037113673 28.038147251615996 28.174372670576343 34 19.75837042151328 22.877084982749604 30.61030641417075 26.754238181566365 35 18.316220747193324 21.536225832391057 31.318926651190576 28.828626769225046 36 21.038661972850008 23.623740845093714 31.97142366932158 23.3661735127347 37 19.56478149153397 22.962561782051733 35.064298811179995 22.4083579152343 38 20.738407919678682 23.911695334641152 28.048276304012138 27.301620441668028 39 21.634208910672093 21.4522993982516 30.987251864055715 25.92623982702059 40 19.328195767709822 21.522169188249475 31.241098320024307 27.908536724016397 41 17.79602155627722 23.164005895521925 30.485346982059173 28.554625566141677 42 19.630930405141424 22.232959936497043 32.2334353818136 25.902674276547938 43 22.48122507788001 21.192044766277284 32.02299915039989 24.303731005442817 44 20.959386634198577 22.147586494872424 30.350361855228968 26.542665015700027 45 20.310300419425456 21.075664021399174 28.6746238297327 29.93941172944267 46 23.040390113218002 23.118115086706755 29.24526156727448 24.596233232800767 47 17.838604919412017 21.3590707731361 35.709044003497624 25.09328030395426 48 19.197655021012615 22.081851011975022 31.080480489171215 27.640013477841148 49 19.77676808811035 19.87599145852153 35.20145444923794 25.145786004130173 50 19.896559636346346 19.573256821089927 32.169663694788916 28.36051984777481 51 18.694509846885936 19.786897140506493 28.944387368038083 32.57420564456948 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 628.0 1 1018.0 2 1408.0 3 2687.0 4 3966.0 5 2819.0 6 1672.0 7 1666.0 8 1660.0 9 1678.0 10 1696.0 11 1782.5 12 1869.0 13 1886.5 14 1904.0 15 1947.5 16 1991.0 17 2094.0 18 2197.0 19 2360.5 20 2524.0 21 3279.5 22 4035.0 23 3829.5 24 3624.0 25 5086.0 26 7735.5 27 8923.0 28 11071.5 29 13220.0 30 14492.0 31 15764.0 32 17720.5 33 19677.0 34 22144.0 35 24611.0 36 25591.0 37 26571.0 38 28393.5 39 30216.0 40 35957.5 41 41699.0 42 46736.5 43 51774.0 44 58705.0 45 65636.0 46 99420.0 47 133204.0 48 122135.5 49 111067.0 50 108320.5 51 105574.0 52 86008.0 53 66442.0 54 55859.0 55 45276.0 56 40783.5 57 36291.0 58 34464.5 59 32638.0 60 31057.5 61 29477.0 62 26719.5 63 23962.0 64 20543.0 65 17124.0 66 14164.5 67 11205.0 68 9308.0 69 7411.0 70 6362.0 71 5313.0 72 4642.5 73 3972.0 74 3101.5 75 1766.5 76 1302.0 77 945.5 78 589.0 79 406.0 80 223.0 81 180.0 82 137.0 83 156.0 84 175.0 85 118.0 86 61.0 87 34.0 88 7.0 89 10.5 90 14.0 91 9.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 967514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.022359825233472 #Duplication Level Percentage of deduplicated Percentage of total 1 69.18482064633268 18.695371179494437 2 12.850013396936404 6.944753715421724 3 5.083757024787382 4.121253347635891 4 2.584076455274903 2.793113751614091 5 1.6064055956541785 2.170443501551786 6 1.0140792399584484 1.6441688468073885 7 0.7206207781016971 1.363101177438265 8 0.5552025871210804 1.20023072680691 9 0.4370886319500876 1.0630049659266876 >10 5.099959194976142 33.52017839430829 >50 0.7645979751722722 13.124416121038465 >100 0.08589689784050598 4.55005280851623 >500 0.006548194005778472 1.2794356298275482 >1k 0.005392630357699918 2.9980137037034553 >5k 3.8518788269285126E-4 0.7822127203184206 >10k+ 0.0011555636480785538 3.7502494095905115 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGC 12486 1.2905239614103776 No Hit GAATCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTC 12155 1.2563125701540234 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCG 11389 1.1771405891801048 No Hit GCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 7515 0.776732946499999 No Hit CCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 4964 0.513067511167797 No Hit CTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGCT 3226 0.3334318676525611 No Hit GAATGACTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCT 2575 0.26614601959248135 No Hit GAACTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCT 2311 0.23885959272940752 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2057 0.21260674264145016 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTGTCCCTT 1986 0.20526834753812348 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTA 1895 0.19586279888456395 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTC 1800 0.18604381952095783 No Hit TCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 1672 0.1728140367994675 No Hit TGTGCGGGGCAATGAGTTTGGCCACCTAAATAGTGTTGCATAAAATTATAT 1467 0.15162571290958063 No Hit ACTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTGC 1429 0.1476981211641382 No Hit CGCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCCGTCTTCTG 1218 0.12588965120918147 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1144 0.11824118307331988 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTGTCCCTTCGTATGCC 1059 0.10945578048483018 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.067153550232865E-4 0.0 0.0 0.35038252676447057 0.0 2 2.067153550232865E-4 0.0 0.0 2.045758510987955 0.0 3 2.067153550232865E-4 0.0 0.0 2.736911300508313 0.0 4 2.067153550232865E-4 0.0 0.0 3.745372159989416 0.0 5 2.067153550232865E-4 0.0 0.0 7.002069220703783 0.0 6 2.067153550232865E-4 0.0 0.0 8.254970987499922 0.0 7 2.067153550232865E-4 0.0 0.0 9.643788100223873 0.0 8 2.067153550232865E-4 0.0 0.0 11.536783963849619 0.0 9 2.067153550232865E-4 0.0 0.0 12.225662884464722 0.0 10 2.067153550232865E-4 0.0 0.0 14.895598409945489 0.0 11 2.067153550232865E-4 0.0 0.0 16.969780282249147 0.0 12 2.067153550232865E-4 0.0 0.0 19.960021250338496 0.0 13 2.067153550232865E-4 0.0 0.0 20.747916826009753 0.0 14 2.067153550232865E-4 0.0 0.0 21.092614680511083 0.0 15 2.067153550232865E-4 0.0 0.0 21.838443681435102 0.0 16 2.067153550232865E-4 0.0 0.0 22.93269141325087 0.0 17 2.067153550232865E-4 0.0 0.0 24.07065944265406 0.0 18 2.067153550232865E-4 0.0 0.0 25.328212304938223 0.0 19 2.067153550232865E-4 0.0 0.0 26.28416746424341 0.0 20 3.1007303253492973E-4 0.0 0.0 27.049427708539618 0.0 21 3.1007303253492973E-4 0.0 0.0 27.889932342064302 0.0 22 3.1007303253492973E-4 0.0 0.0 28.857566918928306 0.0 23 3.1007303253492973E-4 0.0 0.0 29.711921481239546 0.0 24 3.1007303253492973E-4 0.0 0.0 30.422608871809608 0.0 25 4.13430710046573E-4 0.0 0.0 31.019396101761835 0.0 26 4.13430710046573E-4 0.0 0.0 31.562850770118054 0.0 27 4.13430710046573E-4 0.0 0.0 32.163462234138215 0.0 28 4.13430710046573E-4 0.0 0.0 32.72521121141399 0.0 29 4.13430710046573E-4 0.0 0.0 33.29791610250601 0.0 30 4.13430710046573E-4 0.0 0.0 33.94793253637673 0.0 31 5.167883875582162E-4 0.0 0.0 34.53190341431752 0.0 32 5.167883875582162E-4 0.0 0.0 35.10388480166695 0.0 33 5.167883875582162E-4 0.0 0.0 35.644238739697826 0.0 34 5.167883875582162E-4 0.0 0.0 36.21539326562716 0.0 35 5.167883875582162E-4 0.0 0.0 36.76535946766662 0.0 36 5.167883875582162E-4 0.0 0.0 37.323697641584516 0.0 37 7.235037425815027E-4 0.0 0.0 37.84079610217527 0.0 38 7.235037425815027E-4 0.0 0.0 38.39830741467307 0.0 39 7.235037425815027E-4 0.0 0.0 38.927498723532686 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTATGCG 35 1.2116652E-7 45.000004 1 TACGGGT 45 3.8380676E-10 45.000004 4 TAACGAT 20 7.032731E-4 45.000004 22 GCGTTAC 20 7.032731E-4 45.000004 27 CGCCTAT 20 7.032731E-4 45.000004 3 ACGATAG 40 6.8139343E-9 45.000004 1 AACGATA 20 7.032731E-4 45.000004 23 ACGTAGT 20 7.032731E-4 45.000004 29 CGCAATA 20 7.032731E-4 45.000004 12 TAGGACG 40 6.8139343E-9 45.000004 1 GACTCGT 20 7.032731E-4 45.000004 15 AGCGATC 25 3.890346E-5 45.0 24 CGGGTAC 65 0.0 44.999996 6 TGCTACG 30 2.165145E-6 44.999996 1 ATAACGA 30 2.165145E-6 44.999996 44 TAGTGCG 60 0.0 44.999996 1 TCACGAC 60 3.6379788E-12 41.249996 25 AGTACGG 60 3.6379788E-12 41.249996 2 CCTAAAT 225 0.0 41.0 25 CATACGA 225 0.0 41.0 18 >>END_MODULE