##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551383_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 461345 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.021649741516654 33.0 31.0 34.0 30.0 34.0 2 32.040160834082954 33.0 31.0 34.0 30.0 34.0 3 32.083822302181666 33.0 31.0 34.0 30.0 34.0 4 35.75189717023052 37.0 35.0 37.0 33.0 37.0 5 34.79903542901733 37.0 35.0 37.0 33.0 37.0 6 35.308909818032056 37.0 35.0 37.0 33.0 37.0 7 35.886295505532736 37.0 35.0 37.0 35.0 37.0 8 35.86370070121059 37.0 35.0 37.0 35.0 37.0 9 37.69918174034616 39.0 38.0 39.0 35.0 39.0 10 37.43237707138909 39.0 37.0 39.0 35.0 39.0 11 37.366578157344286 39.0 37.0 39.0 35.0 39.0 12 37.248167857026736 39.0 37.0 39.0 34.0 39.0 13 37.145184189706185 39.0 37.0 39.0 33.0 39.0 14 38.23872373169753 40.0 37.0 41.0 33.0 41.0 15 38.39565401163988 40.0 38.0 41.0 34.0 41.0 16 38.39882300664362 40.0 37.0 41.0 34.0 41.0 17 38.39982009125492 40.0 37.0 41.0 34.0 41.0 18 38.38742806359666 40.0 37.0 41.0 34.0 41.0 19 38.282346183441895 40.0 37.0 41.0 34.0 41.0 20 38.29562041422363 40.0 37.0 41.0 34.0 41.0 21 38.19647335508134 40.0 37.0 41.0 34.0 41.0 22 38.23459450086161 40.0 37.0 41.0 34.0 41.0 23 38.237613933173655 40.0 37.0 41.0 34.0 41.0 24 38.18776403775916 40.0 37.0 41.0 34.0 41.0 25 38.01755085673411 40.0 36.0 41.0 34.0 41.0 26 38.02935330392656 40.0 36.0 41.0 34.0 41.0 27 38.0336689462333 40.0 36.0 41.0 34.0 41.0 28 37.93983027885856 40.0 36.0 41.0 34.0 41.0 29 37.924072006849535 40.0 36.0 41.0 34.0 41.0 30 37.80187278500905 40.0 36.0 41.0 33.0 41.0 31 37.71642046624544 40.0 36.0 41.0 33.0 41.0 32 37.63146018706174 40.0 36.0 41.0 33.0 41.0 33 37.48787566788412 40.0 36.0 41.0 33.0 41.0 34 37.385316845310996 40.0 35.0 41.0 33.0 41.0 35 37.32973804853201 40.0 35.0 41.0 33.0 41.0 36 37.25415253226978 39.0 35.0 41.0 33.0 41.0 37 37.16334630265853 39.0 35.0 41.0 32.0 41.0 38 37.10497566896791 39.0 35.0 41.0 32.0 41.0 39 37.07105528400655 39.0 35.0 41.0 32.0 41.0 40 36.90318958696854 39.0 35.0 41.0 31.0 41.0 41 36.83968396752972 39.0 35.0 41.0 31.0 41.0 42 36.85931786407136 39.0 35.0 41.0 32.0 41.0 43 36.75334727806739 39.0 35.0 41.0 31.0 41.0 44 36.57913925587142 39.0 35.0 41.0 31.0 41.0 45 36.54035049691662 39.0 35.0 41.0 31.0 41.0 46 36.41431033174739 39.0 35.0 41.0 31.0 41.0 47 36.320874833367654 39.0 35.0 40.0 31.0 41.0 48 36.30506670712807 39.0 35.0 40.0 31.0 41.0 49 36.27323152954947 38.0 35.0 40.0 31.0 41.0 50 36.140714649557275 38.0 35.0 40.0 31.0 41.0 51 34.99869728727958 37.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 8.0 10 5.0 11 7.0 12 5.0 13 9.0 14 9.0 15 17.0 16 18.0 17 47.0 18 104.0 19 172.0 20 325.0 21 459.0 22 733.0 23 1083.0 24 1653.0 25 2381.0 26 3119.0 27 3775.0 28 4438.0 29 5201.0 30 6475.0 31 8373.0 32 10700.0 33 15327.0 34 28195.0 35 39731.0 36 34625.0 37 52492.0 38 92497.0 39 149260.0 40 99.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.32556980134173 22.890028070099383 24.77885313593948 12.005548992619406 2 32.571719645818206 25.2806468044522 24.05228191483597 18.095351634893625 3 32.43342834538144 24.611299569736314 26.667894959303773 16.287377125578473 4 30.518592376637876 25.978389274837703 24.926681767440854 18.57633658108357 5 24.804864038842947 31.80851640312564 24.08457878594111 19.3020407720903 6 24.7487238400763 35.44809199189327 24.955727275683056 14.847456892347374 7 77.42166924969382 7.61295776479641 9.738915562106449 5.22645742340331 8 76.81106330403495 7.15516587369539 9.824101269115303 6.209669553154364 9 69.21371208098061 9.976698566148977 13.5382414462062 7.271347906664211 10 38.681897495366805 27.741061461595983 19.310277558009734 14.266763485027473 11 31.27182477321744 25.65303623102017 24.461303362992986 18.6138356327694 12 28.91805481797787 23.66710379434046 28.24155458496353 19.17328680271814 13 23.91984306755248 26.55778213701243 29.52324182553187 19.99913296990322 14 18.96780066978075 30.779568435769328 28.681572359080516 21.57105853536941 15 18.18053734190248 26.55388050157691 35.400622094094444 19.864960062426167 16 19.88576878474894 25.546825044164343 33.47082985618138 21.09657631490533 17 19.901808841539413 25.648050807963674 28.40932490869089 26.040815441806025 18 22.255362039254788 26.24239993930789 29.674755334944564 21.827482686492754 19 23.668837854534026 28.095460013655725 27.423511688649494 20.81219044316076 20 26.313929922292427 26.818541438619686 27.659127117450065 19.208401521637818 21 23.73993432247017 27.66519632812754 28.03671872459873 20.558150624803563 22 19.95209658715278 28.169591086930605 26.587261160303026 25.291051165613588 23 22.058329449761025 27.63094863930464 27.07366504459786 23.237056866336474 24 22.73396265267858 25.66192328951219 28.659679849136765 22.94443420867247 25 21.206689137196673 27.483336765327465 26.73465627675601 24.575317820719853 26 19.168084622137446 31.484030389404893 27.147579360348544 22.200305628109117 27 21.962739381590783 30.03522309768178 27.565704624521782 20.43633289620566 28 18.30929131127464 30.573215272735155 28.588800138724817 22.52869327726539 29 19.34907715484074 29.32295787317517 28.029565726300277 23.298399245683814 30 20.48380279400449 30.11000444352925 26.900042267717218 22.50615049474905 31 21.93651172116312 31.1419870162243 22.857731198994244 24.063770063618335 32 21.95363556557457 31.39255871419437 23.453597633007835 23.200208087223228 33 22.33036014262645 31.105571752159445 23.691380637050365 22.87268746816374 34 19.769803509304317 29.876339832446437 25.538588258244914 24.815268400004335 35 19.818790709772514 28.422330360142627 24.25668426015238 27.50219466993248 36 22.07870465703541 31.641613109495065 24.10582102331227 22.17386121015726 37 21.015292243331995 30.9029034670366 25.842915822215478 22.238888467415926 38 19.886202299797333 29.96976232537472 23.786970705220607 26.357064669607343 39 22.614095741798437 26.491454334608587 25.954762704700386 24.939687218892587 40 21.731242345749926 25.514311415535012 28.363805828609827 24.390640410105235 41 19.16786786461325 27.526254755118185 25.645232960149126 27.660644420119436 42 21.894894276517572 28.118002796172064 25.639163749471656 24.34793917783871 43 23.099199080948097 26.452871495301782 26.871863789571798 23.576065634178324 44 20.900193997984154 28.11280061559137 26.06010686145943 24.926898524965047 45 20.25469009092978 26.89418981456394 24.75305899056021 28.09806110394607 46 20.57462419664243 28.137944488398052 26.942093227411156 24.345338087548363 47 20.165169233437016 26.508794936544234 28.883373614106578 24.44266221591217 48 20.382577030205162 25.383823385969283 27.448005288883593 26.785594294941962 49 21.335443106568835 25.150375532410667 29.105116561358635 24.40906479966186 50 19.30854349781617 24.857319359698273 28.49581116084492 27.338325981640637 51 18.743890147286738 25.19524433991915 26.03864786656407 30.022217646230043 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 428.0 1 626.5 2 825.0 3 1591.5 4 2358.0 5 1650.0 6 942.0 7 953.0 8 964.0 9 1035.5 10 1107.0 11 1051.0 12 995.0 13 1013.0 14 1031.0 15 1039.0 16 1047.0 17 1040.5 18 1034.0 19 1173.0 20 1312.0 21 1784.0 22 2256.0 23 2167.0 24 2078.0 25 2748.5 26 4340.0 27 5261.0 28 6051.5 29 6842.0 30 7661.5 31 8481.0 32 9456.5 33 10432.0 34 11331.5 35 12231.0 36 12344.5 37 12458.0 38 13690.0 39 14922.0 40 17873.5 41 20825.0 42 24295.5 43 27766.0 44 30551.5 45 33337.0 46 38078.0 47 42819.0 48 47287.0 49 51755.0 50 49486.5 51 47218.0 52 39253.5 53 31289.0 54 26797.5 55 22306.0 56 20558.0 57 18810.0 58 18278.0 59 17746.0 60 17647.0 61 17548.0 62 15466.0 63 13384.0 64 11496.0 65 9608.0 66 7767.0 67 5926.0 68 4948.0 69 3970.0 70 3326.5 71 2683.0 72 2195.0 73 1707.0 74 1363.5 75 883.0 76 746.0 77 488.0 78 230.0 79 166.0 80 102.0 81 59.5 82 17.0 83 54.0 84 91.0 85 51.0 86 11.0 87 8.0 88 5.0 89 4.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 461345.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.692258948192375 #Duplication Level Percentage of deduplicated Percentage of total 1 72.08689739892289 22.845966191384395 2 11.698315036032088 7.4149205875892275 3 4.536444380245302 4.313105100084186 4 2.1938003246135587 2.7810595187312557 5 1.3168191191943273 2.086648625671861 6 0.8358789557432229 1.5894535388855313 7 0.6419785828039459 1.4242026039791351 8 0.486080615592532 1.2323994191244225 9 0.3963435271786201 1.1304919526206274 >10 5.32036303210414 40.60138553558178 >50 0.40988417467267324 8.053679846955292 >100 0.06968030969435446 3.9373161024954686 >500 0.004781982037847855 1.0247067586666148 >1k 0.002732561164484488 1.5646642182302186 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 2340 0.5072126066176073 No Hit CCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 2022 0.4382837139234196 No Hit CTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGCT 1641 0.3556990972049117 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1224 0.26531120961536375 No Hit TCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 903 0.19573204434858946 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 796 0.17253898925966465 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 712 0.15433135722723773 No Hit ACTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTGC 654 0.14175942082389537 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCC 572 0.12398530383985955 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 552 0.11965015335594836 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 544 0.11791609316238388 No Hit GGTCTTGGGGGATGGACGTGCCAATCAATGGAACAGAATTGAAACTTCAGA 490 0.10621118685582374 No Hit GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAACT 464 0.1005754912267392 No Hit CGCTGTCTCTTATACACATCTGACGCAAACACCGTCGTATGCCGTCTTCTG 462 0.10014197617834808 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.3351504839111727E-4 0.0 0.0 0.38019269743900985 0.0 2 4.3351504839111727E-4 0.0 0.0 1.7481494326371805 0.0 3 4.3351504839111727E-4 0.0 0.0 2.3674256792638912 0.0 4 4.3351504839111727E-4 0.0 0.0 3.106352079246551 0.0 5 4.3351504839111727E-4 0.0 0.0 4.888965958230825 0.0 6 4.3351504839111727E-4 0.0 0.0 5.98489200056357 0.0 7 4.3351504839111727E-4 0.0 0.0 6.982843641959922 0.0 8 4.3351504839111727E-4 0.0 0.0 8.655344698652852 0.0 9 4.3351504839111727E-4 0.0 0.0 9.318839480215457 0.0 10 4.3351504839111727E-4 0.0 0.0 10.67985997463937 0.0 11 4.3351504839111727E-4 0.0 0.0 12.656038322730279 0.0 12 4.3351504839111727E-4 0.0 0.0 14.147330089195721 0.0 13 4.3351504839111727E-4 0.0 0.0 14.783513422709685 0.0 14 4.3351504839111727E-4 0.0 0.0 15.057711690817067 0.0 15 4.3351504839111727E-4 0.0 0.0 15.548884240644202 0.0 16 4.3351504839111727E-4 0.0 0.0 16.533180158016236 0.0 17 4.3351504839111727E-4 0.0 0.0 17.631273775590934 0.0 18 4.3351504839111727E-4 0.0 0.0 18.917946439215772 0.0 19 4.3351504839111727E-4 0.0 0.0 19.597698035093043 0.0 20 4.3351504839111727E-4 0.0 0.0 20.289588052325268 0.0 21 4.3351504839111727E-4 0.0 0.0 21.11565097703454 0.0 22 4.3351504839111727E-4 0.0 0.0 22.014761187397717 0.0 23 4.3351504839111727E-4 0.0 0.0 22.830419750945605 0.0 24 4.3351504839111727E-4 0.0 0.0 23.501501045855054 0.0 25 4.3351504839111727E-4 0.0 0.0 24.07612524249748 0.0 26 6.502725725866759E-4 0.0 0.0 24.60523035905884 0.0 27 6.502725725866759E-4 0.0 0.0 25.159045833378492 0.0 28 6.502725725866759E-4 0.0 0.0 25.723482426383725 0.0 29 6.502725725866759E-4 0.0 0.0 26.298973653122935 0.0 30 6.502725725866759E-4 0.0 0.0 26.98544473225027 0.0 31 8.670300967822345E-4 0.0 0.0 27.60038582839307 0.0 32 8.670300967822345E-4 0.0 0.0 28.212509076721325 0.0 33 8.670300967822345E-4 0.0 0.0 28.778246214871732 0.0 34 8.670300967822345E-4 0.0 0.0 29.330544386522018 0.0 35 8.670300967822345E-4 0.0 0.0 29.895848009624036 0.0 36 8.670300967822345E-4 0.0 0.0 30.519459406734658 0.0 37 0.0010837876209777932 0.0 0.0 31.09516739099806 0.0 38 0.0010837876209777932 0.0 0.0 31.64226338206765 0.0 39 0.0010837876209777932 0.0 0.0 32.19542858381472 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGTTGA 30 2.1626656E-6 45.000004 15 TACGAAG 30 2.1626656E-6 45.000004 1 ACAACGA 35 1.2098099E-7 45.0 13 GTACCGT 20 7.0288905E-4 45.0 44 CGACGGT 25 3.887163E-5 45.0 28 CTATCGA 20 7.0288905E-4 45.0 1 TTAGCAC 20 7.0288905E-4 45.0 28 TAGGTCG 20 7.0288905E-4 45.0 1 CGTGAGA 55 1.8189894E-12 45.0 2 CGTTGAA 20 7.0288905E-4 45.0 16 CAACCGG 20 7.0288905E-4 45.0 2 CGACCGC 20 7.0288905E-4 45.0 25 CACGACG 25 3.887163E-5 45.0 26 TACGGGT 25 3.887163E-5 45.0 4 GCCGCAC 20 7.0288905E-4 45.0 27 CTAACGG 20 7.0288905E-4 45.0 2 ATATCAC 55 1.8189894E-12 45.0 30 TCGTGCG 20 7.0288905E-4 45.0 45 TTCCAAT 20 7.0288905E-4 45.0 15 CTACGGA 20 7.0288905E-4 45.0 11 >>END_MODULE