SRR3551382_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551382_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	478907
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	5691	1.18833092855189	No Hit
GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	1462	0.3052784778673104	No Hit
CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	1410	0.29442041983099015	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC	1095	0.22864564518789662	No Hit
CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT	834	0.17414654619790482	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	644	0.1344728726036579	No Hit
GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA	626	0.130714314052624	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	589	0.1229883881421654	No Hit
TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC	540	0.11275675653101751	No Hit
CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA	516	0.10774534512963894	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGCAC	20	7.029159E-4	45.000004	10
GATAAGC	25	3.887385E-5	45.000004	27
ACGTTTA	20	7.029159E-4	45.000004	36
GCGAACG	20	7.029159E-4	45.000004	1
CGGCATA	20	7.029159E-4	45.000004	45
TGGCGTG	40	6.8012014E-9	45.000004	2
TTACTCA	20	7.029159E-4	45.000004	12
AAGCGCC	25	3.887385E-5	45.000004	43
TAACGAG	20	7.029159E-4	45.000004	1
GCGTTAG	20	7.029159E-4	45.000004	1
CGTTAGG	30	2.1628402E-6	45.000004	2
TACGCTC	20	7.029159E-4	45.000004	19
GTTCGCG	20	7.029159E-4	45.000004	2
CTACGTT	20	7.029159E-4	45.000004	20
ACGTGTA	20	7.029159E-4	45.000004	34
GCGATAT	30	2.1628402E-6	45.000004	9
GCGATAC	30	2.1628402E-6	45.000004	9
CGATGTC	25	3.887385E-5	45.000004	32
ATAACGG	20	7.029159E-4	45.000004	2
ACCCGTA	20	7.029159E-4	45.000004	20