##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551382_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 478907 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72262046702178 33.0 31.0 34.0 30.0 34.0 2 31.87187909134759 33.0 31.0 34.0 30.0 34.0 3 31.78311237881259 33.0 31.0 34.0 30.0 34.0 4 35.43721432344902 37.0 35.0 37.0 33.0 37.0 5 33.464480577648686 37.0 35.0 37.0 30.0 37.0 6 34.39384891012242 37.0 35.0 37.0 30.0 37.0 7 35.44943590300413 37.0 35.0 37.0 32.0 37.0 8 35.369199030291895 37.0 35.0 37.0 33.0 37.0 9 37.32647257191898 39.0 37.0 39.0 34.0 39.0 10 36.827367317662926 39.0 37.0 39.0 32.0 39.0 11 36.940758852971456 39.0 37.0 39.0 33.0 39.0 12 36.94470951562621 39.0 37.0 39.0 33.0 39.0 13 37.065096146015826 39.0 37.0 39.0 33.0 39.0 14 38.10211377156734 40.0 37.0 41.0 33.0 41.0 15 38.1991639295312 40.0 37.0 41.0 33.0 41.0 16 38.2252065641137 40.0 37.0 41.0 34.0 41.0 17 38.09297629811216 40.0 37.0 41.0 34.0 41.0 18 38.033398968902105 39.0 37.0 41.0 34.0 41.0 19 37.871160789046726 39.0 37.0 41.0 34.0 41.0 20 38.026021753701656 40.0 36.0 41.0 34.0 41.0 21 37.892267183398864 40.0 36.0 41.0 34.0 41.0 22 38.02213373368942 40.0 36.0 41.0 34.0 41.0 23 38.112575092867715 40.0 36.0 41.0 34.0 41.0 24 37.941589912028846 40.0 36.0 41.0 34.0 41.0 25 37.63759560833314 39.0 35.0 41.0 33.0 41.0 26 37.72493198053067 39.0 35.0 41.0 33.0 41.0 27 37.382842597832145 40.0 35.0 41.0 33.0 41.0 28 37.455718960048614 40.0 35.0 41.0 33.0 41.0 29 37.64419396667829 40.0 35.0 41.0 33.0 41.0 30 37.33648913045748 39.0 35.0 41.0 33.0 41.0 31 37.23231023977515 39.0 35.0 41.0 33.0 41.0 32 37.25251666816313 40.0 35.0 41.0 33.0 41.0 33 37.199736065666194 40.0 35.0 41.0 33.0 41.0 34 37.04811998989366 40.0 35.0 41.0 32.0 41.0 35 36.987486088113144 40.0 35.0 41.0 32.0 41.0 36 36.76633041488222 40.0 35.0 41.0 31.0 41.0 37 36.76767931978443 40.0 35.0 41.0 31.0 41.0 38 36.574725364214764 39.0 35.0 41.0 31.0 41.0 39 36.54332678369704 39.0 35.0 41.0 31.0 41.0 40 36.457211943028604 39.0 35.0 41.0 30.0 41.0 41 36.289502972393386 39.0 35.0 41.0 30.0 41.0 42 36.428709540683265 39.0 35.0 41.0 30.0 41.0 43 36.35404368697889 39.0 35.0 41.0 30.0 41.0 44 36.39167938660324 39.0 35.0 41.0 30.0 41.0 45 36.366532541808745 39.0 35.0 41.0 30.0 41.0 46 36.26358562309593 39.0 35.0 41.0 30.0 41.0 47 36.219226279841386 39.0 35.0 41.0 30.0 41.0 48 36.17635156721451 39.0 35.0 41.0 30.0 41.0 49 36.142271881597054 39.0 35.0 41.0 30.0 41.0 50 36.083559020853734 39.0 35.0 41.0 30.0 41.0 51 35.16839177543866 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 4.0 8 14.0 9 31.0 10 39.0 11 39.0 12 34.0 13 25.0 14 37.0 15 46.0 16 72.0 17 126.0 18 194.0 19 329.0 20 465.0 21 732.0 22 1103.0 23 1726.0 24 2757.0 25 3982.0 26 5565.0 27 6307.0 28 6267.0 29 6354.0 30 7044.0 31 8783.0 32 11407.0 33 16277.0 34 29831.0 35 36878.0 36 38808.0 37 55321.0 38 96479.0 39 141792.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.759911632112285 20.796730889295834 22.98337673076401 16.459980747827867 2 36.69877450110356 22.5287999548973 23.85515350579549 16.91727203820366 3 32.213143679252966 21.879613369610386 29.653147688382088 16.254095262754564 4 28.829188130472094 24.60415070149319 28.676757700346833 17.88990346768788 5 23.74218794045608 32.42717270785351 26.244552700211106 17.586086651479306 6 25.558198147030637 32.82912966400575 27.73941495948065 13.873257229482968 7 74.80742607646161 6.359063450732607 13.779293265707121 5.054217207098664 8 74.96716481488055 6.345073260570423 13.365225398668217 5.322536525880808 9 69.27733359504037 8.830524506845796 15.684673642272925 6.2074682558409044 10 37.11096308886694 25.42497812727732 23.12870766140399 14.335351122451751 11 28.60137772051776 25.922151900055752 27.608700645428026 17.867769733998458 12 26.77910324969148 22.69417653114279 31.780909445884063 18.74581077328166 13 23.263180534007645 24.50580175274114 32.75166159609277 19.479356117158446 14 19.87149905931632 27.41450845362461 31.7800742106505 20.933918276408573 15 18.71344540798109 26.913158504678364 35.03644757750461 19.33694850983594 16 21.065467825694757 25.06227722710255 34.3555220533423 19.516732893860393 17 20.845800959267667 26.35814469197569 31.2641076451169 21.531946703639747 18 21.432971328462518 25.833408156489675 32.57500934419418 20.158611170853632 19 22.395997552760765 26.570920867725885 30.976160298346024 20.056921281167327 20 24.5043400910824 25.97665099904574 31.623885221974202 17.89512368789765 21 23.42605140455245 25.65842637505821 31.777986122566592 19.13753609782275 22 21.345271628938395 24.9931615115252 31.203553090683577 22.458013768852826 23 21.36343799526839 25.76178673521164 31.69801234895293 21.17676292056704 24 20.734297055586993 25.200926275874018 32.95942636044159 21.1053503080974 25 21.251516473970938 26.15935870638767 30.48003056960955 22.109094250031845 26 19.28850486628928 27.56109223711493 31.919558494655536 21.230844401940253 27 20.21728644601144 28.602421764559715 31.922481817973008 19.257809971455835 28 18.594424387198348 27.020277423382826 33.40230984303842 20.982988346380406 29 19.584178138970614 26.47695690395004 32.44930644154293 21.48955851553642 30 20.422127887042787 26.139104251973766 32.62220013489049 20.81656772609296 31 20.6142319907623 27.133242988722234 30.79679353193835 21.455731488577115 32 21.22771226981439 27.709555299880773 29.77363037082356 21.289102059481277 33 20.561612171047823 27.641483628345377 29.354968710000062 22.441935490606735 34 20.042304664579973 26.028853201143438 31.258678616098738 22.67016351817785 35 20.22125381337086 25.901271019216676 30.428245985128637 23.449229182283826 36 20.22605641596385 28.926910652798977 29.690942082700815 21.156090848536355 37 20.44467923834899 28.621423366123278 30.77946240084192 20.154434994685815 38 19.851662222519195 28.483609552585364 28.934845387517825 22.729882837377613 39 21.070061619479354 25.442726875990534 30.560004343223213 22.927207161306892 40 20.988417375398562 24.47448043148252 33.03522395788744 21.501878235231477 41 17.929368332473736 26.733165311845514 30.93961875687764 24.397847598803107 42 19.614246607378885 27.541464209126197 30.641439778495617 22.2028494049993 43 21.282420177612774 26.32473528263316 30.71264358215687 21.680200957597194 44 21.48642638341056 25.33017892826791 29.8181066470108 23.365288041310734 45 21.157552510195092 25.080861211049328 29.884090230462277 23.877496048293303 46 21.093865823635905 25.75614889738509 30.66712326192768 22.48286201705133 47 19.827649209554256 26.12532287061998 32.0878583942185 21.95916952560727 48 19.618422783546702 25.91359073891173 31.922064200356225 22.54592227718534 49 20.284314073504877 25.342916265579746 32.30084337877709 22.071926282138286 50 19.986761521548026 23.72903298552746 32.02584217812644 24.25836331479807 51 18.968818580643006 24.70417012071237 30.003737677670195 26.323273620974426 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 421.0 1 1031.5 2 1642.0 3 5526.0 4 9410.0 5 6174.5 6 2939.0 7 2891.0 8 2843.0 9 2802.0 10 2761.0 11 2740.5 12 2720.0 13 2753.5 14 2787.0 15 2658.0 16 2529.0 17 2265.0 18 2001.0 19 2097.0 20 2193.0 21 2591.5 22 2990.0 23 3249.5 24 3509.0 25 3764.0 26 4691.5 27 5364.0 28 7169.0 29 8974.0 30 9255.5 31 9537.0 32 9929.0 33 10321.0 34 11767.5 35 13214.0 36 14530.0 37 15846.0 38 16730.0 39 17614.0 40 20183.0 41 22752.0 42 25557.0 43 28362.0 44 32673.5 45 36985.0 46 41383.0 47 45781.0 48 44708.5 49 43636.0 50 39057.5 51 34479.0 52 30939.5 53 27400.0 54 24488.0 55 21576.0 56 20498.5 57 19421.0 58 19021.5 59 18622.0 60 16930.5 61 15239.0 62 14136.0 63 13033.0 64 10894.0 65 8755.0 66 7289.0 67 5823.0 68 5361.5 69 4900.0 70 4066.0 71 3232.0 72 2529.0 73 1826.0 74 1545.0 75 1125.0 76 986.0 77 760.5 78 535.0 79 429.0 80 323.0 81 264.5 82 206.0 83 137.0 84 68.0 85 61.5 86 55.0 87 28.5 88 2.0 89 6.0 90 10.0 91 6.0 92 2.0 93 1.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 478907.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.6630100018299 #Duplication Level Percentage of deduplicated Percentage of total 1 73.29762008798788 21.742280377803127 2 10.978694216953235 6.5132223272903165 3 4.214041155113486 3.750034347967625 4 2.0911307939382633 2.4811693462290076 5 1.2455361596608685 1.8473175780830575 6 0.7984653594844024 1.4210931566700318 7 0.56954247487373 1.1826040890052483 8 0.41799511399631445 0.9919194597750964 9 0.337320689721647 0.9005352293733637 >10 5.263857444228072 39.69488939680691 >50 0.7130639782596339 13.083971523852217 >100 0.06560188599988631 3.555164948315628 >500 0.0042783838695578036 0.7929743807255644 >1k 0.0021391919347789018 0.8390849208691156 >5k 7.130639782596339E-4 1.2037389172337123 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5691 1.18833092855189 No Hit GCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 1462 0.3052784778673104 No Hit CCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 1410 0.29442041983099015 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCC 1095 0.22864564518789662 No Hit CTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGCT 834 0.17414654619790482 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 644 0.1344728726036579 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 626 0.130714314052624 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 589 0.1229883881421654 No Hit TCTGTCTCTTATACACATCTGACGCTATGCTCATCGTATGCCGTCTTCTGC 540 0.11275675653101751 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 516 0.10774534512963894 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1795755752160649 0.0 2 0.0 0.0 0.0 1.001447045042148 0.0 3 0.0 0.0 0.0 1.3121545519276185 0.0 4 0.0 0.0 0.0 1.7189141106728447 0.0 5 0.0 0.0 0.0 2.809940134514634 0.0 6 0.0 0.0 0.0 3.39209909230811 0.0 7 0.0 0.0 0.0 4.008293885869281 0.0 8 2.0880880839077316E-4 0.0 0.0 4.925590981129948 0.0 9 2.0880880839077316E-4 0.0 0.0 5.27451049995093 0.0 10 2.0880880839077316E-4 0.0 0.0 6.146078466174017 0.0 11 2.0880880839077316E-4 0.0 0.0 7.7232113959495265 0.0 12 2.0880880839077316E-4 0.0 0.0 8.805258641030512 0.0 13 2.0880880839077316E-4 0.0 0.0 9.269649430891592 0.0 14 2.0880880839077316E-4 0.0 0.0 9.464676857928575 0.0 15 2.0880880839077316E-4 0.0 0.0 9.842620801115874 0.0 16 2.0880880839077316E-4 0.0 0.0 10.539415794715884 0.0 17 2.0880880839077316E-4 0.0 0.0 11.329339516858179 0.0 18 2.0880880839077316E-4 0.0 0.0 12.171047823481386 0.0 19 2.0880880839077316E-4 0.0 0.0 12.699960535135213 0.0 20 2.0880880839077316E-4 0.0 0.0 13.223861835387664 0.0 21 2.0880880839077316E-4 0.0 0.0 13.85759656885366 0.0 22 2.0880880839077316E-4 0.0 0.0 14.53288425518942 0.0 23 2.0880880839077316E-4 0.0 0.0 15.187708678302885 0.0 24 2.0880880839077316E-4 0.0 0.0 15.716203772339933 0.0 25 2.0880880839077316E-4 0.0 0.0 16.192287855470894 0.0 26 2.0880880839077316E-4 0.0 0.0 16.618257824588074 0.0 27 2.0880880839077316E-4 0.0 0.0 17.046524690597547 0.0 28 2.0880880839077316E-4 0.0 0.0 17.50005742242231 0.0 29 2.0880880839077316E-4 0.0 0.0 17.963404168241432 0.0 30 2.0880880839077316E-4 0.0 0.0 18.440114677797567 0.0 31 2.0880880839077316E-4 0.0 0.0 18.894691453664283 0.0 32 2.0880880839077316E-4 0.0 0.0 19.357829390675015 0.0 33 2.0880880839077316E-4 0.0 0.0 19.81512068105081 0.0 34 2.0880880839077316E-4 0.0 0.0 20.247146105611318 0.0 35 2.0880880839077316E-4 0.0 0.0 20.71487783640665 0.0 36 2.0880880839077316E-4 0.0 0.0 21.163816774446815 0.0 37 2.0880880839077316E-4 0.0 0.0 21.606909065852033 0.0 38 2.0880880839077316E-4 0.0 0.0 22.03183499092726 0.0 39 2.0880880839077316E-4 0.0 0.0 22.481191546584203 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGCAC 20 7.029159E-4 45.000004 10 GATAAGC 25 3.887385E-5 45.000004 27 ACGTTTA 20 7.029159E-4 45.000004 36 GCGAACG 20 7.029159E-4 45.000004 1 CGGCATA 20 7.029159E-4 45.000004 45 TGGCGTG 40 6.8012014E-9 45.000004 2 TTACTCA 20 7.029159E-4 45.000004 12 AAGCGCC 25 3.887385E-5 45.000004 43 TAACGAG 20 7.029159E-4 45.000004 1 GCGTTAG 20 7.029159E-4 45.000004 1 CGTTAGG 30 2.1628402E-6 45.000004 2 TACGCTC 20 7.029159E-4 45.000004 19 GTTCGCG 20 7.029159E-4 45.000004 2 CTACGTT 20 7.029159E-4 45.000004 20 ACGTGTA 20 7.029159E-4 45.000004 34 GCGATAT 30 2.1628402E-6 45.000004 9 GCGATAC 30 2.1628402E-6 45.000004 9 CGATGTC 25 3.887385E-5 45.000004 32 ATAACGG 20 7.029159E-4 45.000004 2 ACCCGTA 20 7.029159E-4 45.000004 20 >>END_MODULE