##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551356_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 800635 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.63971472643589 31.0 31.0 34.0 30.0 34.0 2 31.7785207991157 33.0 31.0 34.0 30.0 34.0 3 31.732715906749018 33.0 31.0 34.0 30.0 34.0 4 35.39950789061183 37.0 35.0 37.0 33.0 37.0 5 33.41839789666952 37.0 35.0 37.0 30.0 37.0 6 34.30092738888507 37.0 35.0 37.0 30.0 37.0 7 35.436628426186715 37.0 35.0 37.0 32.0 37.0 8 35.38331574312889 37.0 35.0 37.0 33.0 37.0 9 37.2980446770376 39.0 37.0 39.0 34.0 39.0 10 36.70046275768609 39.0 35.0 39.0 32.0 39.0 11 36.737424669168846 39.0 37.0 39.0 32.0 39.0 12 36.76714108176635 39.0 35.0 39.0 33.0 39.0 13 36.88671367102363 39.0 37.0 39.0 33.0 39.0 14 37.92808208484515 40.0 37.0 41.0 33.0 41.0 15 38.04840283025349 40.0 37.0 41.0 33.0 41.0 16 38.100992337332244 40.0 37.0 41.0 33.0 41.0 17 37.950682895451735 40.0 37.0 41.0 33.0 41.0 18 37.938407638936596 40.0 37.0 41.0 33.0 41.0 19 37.86341591361857 40.0 37.0 41.0 33.0 41.0 20 37.9978404641316 40.0 37.0 41.0 34.0 41.0 21 37.88359739456806 40.0 37.0 41.0 33.0 41.0 22 38.00897287777826 40.0 37.0 41.0 34.0 41.0 23 38.05484271859212 40.0 37.0 41.0 34.0 41.0 24 37.94839720971479 40.0 36.0 41.0 33.0 41.0 25 37.65892198067784 40.0 36.0 41.0 33.0 41.0 26 37.75242900947373 40.0 36.0 41.0 33.0 41.0 27 37.380993836142565 40.0 36.0 41.0 33.0 41.0 28 37.40831714826356 40.0 36.0 41.0 32.0 41.0 29 37.63962354880813 40.0 36.0 41.0 33.0 41.0 30 37.399450436216256 40.0 36.0 41.0 32.0 41.0 31 37.4253811037489 39.0 36.0 41.0 33.0 41.0 32 37.487017180113284 40.0 36.0 41.0 33.0 41.0 33 37.52093775565645 40.0 36.0 41.0 33.0 41.0 34 37.42643027097242 40.0 36.0 41.0 33.0 41.0 35 37.392709536805164 40.0 36.0 41.0 33.0 41.0 36 37.22075477589663 40.0 36.0 41.0 32.0 41.0 37 37.199813897718684 40.0 36.0 41.0 32.0 41.0 38 37.05301417000256 40.0 35.0 41.0 32.0 41.0 39 36.942959026272895 40.0 35.0 41.0 31.0 41.0 40 36.90340667095493 39.0 35.0 41.0 31.0 41.0 41 36.74611277298644 39.0 35.0 41.0 31.0 41.0 42 36.87803555927483 39.0 35.0 41.0 31.0 41.0 43 36.80714557819731 39.0 35.0 41.0 31.0 41.0 44 36.88252574518975 39.0 35.0 41.0 31.0 41.0 45 36.870640179357636 39.0 35.0 41.0 32.0 41.0 46 36.72609741018067 39.0 35.0 41.0 31.0 41.0 47 36.662370493420845 39.0 35.0 41.0 31.0 41.0 48 36.62922805023513 39.0 35.0 41.0 31.0 41.0 49 36.5728777782635 39.0 35.0 41.0 31.0 41.0 50 36.47129341085513 39.0 35.0 41.0 31.0 41.0 51 35.49982326528318 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 18.0 9 44.0 10 33.0 11 37.0 12 36.0 13 38.0 14 41.0 15 62.0 16 101.0 17 185.0 18 263.0 19 453.0 20 908.0 21 1628.0 22 2589.0 23 3317.0 24 4263.0 25 5335.0 26 6318.0 27 7091.0 28 7838.0 29 9055.0 30 11186.0 31 14870.0 32 19856.0 33 28383.0 34 49988.0 35 59675.0 36 65335.0 37 98720.0 38 167170.0 39 235734.0 40 62.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.265120810356784 22.197255928107065 24.651682726835574 11.885940534700582 2 31.063343471119797 26.591393081741366 25.73707119973521 16.608192247403622 3 31.72918995547284 25.64277105047868 26.576779681128105 16.05125931292037 4 28.867586353332044 25.67412116632423 27.97804242882212 17.480250051521605 5 25.70634558818937 34.425799521629706 22.904694398820936 16.963160491359982 6 25.959144928712835 36.31342621793951 23.35471219719348 14.372716656154177 7 80.6221311833732 6.06518575880395 9.496212381422247 3.8164706764006073 8 82.06611002516753 7.048904931710455 7.114852585760054 3.770132457361969 9 75.70515903001991 8.359864357666103 8.979622424700393 6.955354187613581 10 40.21920100919895 32.50382508883574 15.295609110268723 11.981364791696592 11 29.164975300854945 25.100576417468634 27.96380373078869 17.77064455088773 12 28.089204194170875 21.855277373584716 29.56141063031219 20.494107801932216 13 25.518244893116087 24.365909559287317 30.508908553835397 19.606936993761202 14 19.718473461689783 28.827368276430583 29.530685018766356 21.92347324311328 15 19.706607879995254 26.905144041916728 33.140319871102314 20.247928206985705 16 22.36574718816939 26.59663891785895 30.08262191885191 20.95499197511975 17 22.44980546691064 27.708506373066378 27.510163807477817 22.331524352545166 18 22.21511675107883 27.01405759178652 29.35370050022794 21.417125156906707 19 24.308205361993917 27.644682033635803 27.080879551855713 20.966233052514564 20 26.616123452009965 27.068639267581357 28.132794594290782 18.182442686117895 21 25.270316686130386 28.21610346787238 27.826787487431854 18.686792358565388 22 23.65572326965471 25.177265545473283 29.00884922592692 22.158161958945087 23 23.369950102106454 27.24799690245867 28.54296901834169 20.839083977093182 24 22.228730944812554 26.622743197586917 29.33633928069595 21.812186576904583 25 21.836042641153583 29.64559380991338 27.13646043453009 21.38190311440294 26 21.489317853953423 29.550294453777315 27.67865506754014 21.281732624729123 27 22.65564208409575 29.089535181449723 27.467447713377506 20.787375021077022 28 21.173943182598812 28.843480487363156 29.565282556970406 20.417293773067627 29 22.742573082615674 25.635651701461963 29.620988340504724 22.00078687541764 30 22.03438520674215 27.738732381172444 28.219225989370937 22.00765642271447 31 23.880794619270954 27.31744178058666 26.419154795880768 22.382608804261615 32 24.47956934183492 27.97979104086132 26.57503106908891 20.965608548214853 33 23.676581713265097 27.42947785195501 26.186339592948098 22.707600841831795 34 22.247466073803917 27.15806828330013 28.241957945880458 22.352507697015493 35 23.66296751953137 26.046575530672527 27.32943226314113 22.96102468665497 36 23.12227169684063 29.143867055524673 25.901190929699553 21.832670317935136 37 22.434192859417838 28.253448824995157 27.906973839514887 21.40538447607212 38 21.87451210601585 28.378599486657464 26.402043378068658 23.34484502925803 39 22.23147876373129 27.578984181306087 28.960137890549376 21.229399164413245 40 22.154040230566988 26.89789979204007 28.801014194982734 22.147045782410213 41 20.186601884753976 27.90522522747569 28.10019546984581 23.807977417924523 42 21.492440375451984 27.958308092951217 28.13379380117032 22.415457730426475 43 22.96627052277255 27.18841919226614 27.352788723950365 22.492521561010946 44 21.925346756012416 26.5331892810082 28.407951188743937 23.133512774235452 45 21.722008156026153 26.034585048118057 27.653549994691712 24.589856801164075 46 22.123439519881096 28.595177577797624 27.346668581813187 21.934714320508096 47 21.11811249820455 27.180425537229823 29.37218582749942 22.329276137066202 48 21.963441518294854 25.914930024293213 28.659126818088144 23.462501639323786 49 21.513173918202426 25.97925396716356 30.10985030631936 22.39772180831465 50 20.9245161652938 26.171601291474893 28.99648404079262 23.90739850243869 51 20.62013276961412 25.753433212387666 28.14353606824583 25.482897949752388 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 237.0 1 629.0 2 1021.0 3 2831.5 4 4642.0 5 3213.5 6 1785.0 7 1764.0 8 1743.0 9 1717.5 10 1692.0 11 1683.0 12 1674.0 13 1741.5 14 1809.0 15 1854.0 16 1899.0 17 1816.5 18 1734.0 19 1896.0 20 2058.0 21 2645.5 22 3233.0 23 3435.0 24 3637.0 25 4632.5 26 7424.5 27 9221.0 28 11183.0 29 13145.0 30 15260.0 31 17375.0 32 19674.0 33 21973.0 34 25185.0 35 28397.0 36 29848.0 37 31299.0 38 33102.5 39 34906.0 40 37829.5 41 40753.0 42 44710.5 43 48668.0 44 51834.0 45 55000.0 46 63421.0 47 71842.0 48 69011.0 49 66180.0 50 63334.0 51 60488.0 52 55212.0 53 49936.0 54 46174.5 55 42413.0 56 39339.5 57 36266.0 58 34405.0 59 32544.0 60 31924.5 61 31305.0 62 27904.0 63 24503.0 64 21705.0 65 18907.0 66 15789.0 67 12671.0 68 10276.0 69 7881.0 70 6606.0 71 5331.0 72 4125.0 73 2919.0 74 2432.5 75 1383.0 76 820.0 77 771.5 78 723.0 79 512.5 80 302.0 81 199.5 82 97.0 83 56.5 84 16.0 85 13.0 86 10.0 87 6.5 88 3.0 89 3.0 90 3.0 91 1.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 800635.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.076043370866344 #Duplication Level Percentage of deduplicated Percentage of total 1 75.06969052439867 20.325901964761325 2 8.81797934683933 4.775119824768508 3 3.1392918962707794 2.5499881061171057 4 1.5967211535040895 1.7293156481382588 5 1.0092937879960926 1.366384118886409 6 0.7328750590922949 1.1906014131245526 7 0.5682128396132168 1.0769468842475407 8 0.49519607683072425 1.0726360362681242 9 0.42051787604144963 1.02473642249306 >10 7.444174672159434 49.85163225126494 >50 0.6697437693346722 10.888093914426644 >100 0.028390806065044787 1.491298750920955 >500 0.00558507660295963 1.0483449644170548 >1k 0.002327115251233179 1.6089997001655192 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCG 3286 0.41042422577079446 No Hit GAATCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTC 2958 0.3694567437096804 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGC 2497 0.3118774472762245 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2413 0.3013857750410612 No Hit GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1614 0.201589987947067 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 888 0.11091196362886957 No Hit CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 842 0.10516652407151825 No Hit CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT 811 0.1012945974133032 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.996034397696828E-4 0.0 0.0 0.10416731719197887 0.0 2 4.996034397696828E-4 0.0 0.0 0.5329519693743091 0.0 3 4.996034397696828E-4 0.0 0.0 0.6888282425824502 0.0 4 4.996034397696828E-4 0.0 0.0 0.958364298338194 0.0 5 4.996034397696828E-4 0.0 0.0 1.8146845941034304 0.0 6 4.996034397696828E-4 0.0 0.0 2.2527119099214996 0.0 7 4.996034397696828E-4 0.0 0.0 2.7077257426917383 0.0 8 4.996034397696828E-4 0.0 0.0 3.4496368507497173 0.0 9 4.996034397696828E-4 0.0 0.0 3.736908828617285 0.0 10 4.996034397696828E-4 0.0 0.0 4.734866699557227 0.0 11 4.996034397696828E-4 0.0 0.0 5.467535143979466 0.0 12 4.996034397696828E-4 0.0 0.0 6.371067964802938 0.0 13 4.996034397696828E-4 0.0 0.0 6.647848270435342 0.0 14 4.996034397696828E-4 0.0 0.0 6.755263009985824 0.0 15 4.996034397696828E-4 0.0 0.0 6.969093282207248 0.0 16 4.996034397696828E-4 0.0 0.0 7.330431470020671 0.0 17 4.996034397696828E-4 0.0 0.0 7.770582100457761 0.0 18 4.996034397696828E-4 0.0 0.0 8.30091115177328 0.0 19 4.996034397696828E-4 0.0 0.0 8.67598843418037 0.0 20 4.996034397696828E-4 0.0 0.0 8.976499903201834 0.0 21 4.996034397696828E-4 0.0 0.0 9.315106134505736 0.0 22 4.996034397696828E-4 0.0 0.0 9.695304352170465 0.0 23 4.996034397696828E-4 0.0 0.0 10.076002173274963 0.0 24 4.996034397696828E-4 0.0 0.0 10.372142112198443 0.0 25 4.996034397696828E-4 0.0 0.0 10.631436297438908 0.0 26 4.996034397696828E-4 0.0 0.0 10.883736034522597 0.0 27 6.245042997121036E-4 0.0 0.0 11.151398577379204 0.0 28 6.245042997121036E-4 0.0 0.0 11.422933046894029 0.0 29 6.245042997121036E-4 0.0 0.0 11.69759003790741 0.0 30 7.494051596545243E-4 0.0 0.0 12.005470657665478 0.0 31 8.743060195969449E-4 0.0 0.0 12.292118131233334 0.0 32 8.743060195969449E-4 0.0 0.0 12.57314506610378 0.0 33 8.743060195969449E-4 0.0 0.0 12.862665259450312 0.0 34 8.743060195969449E-4 0.0 0.0 13.142068483141506 0.0 35 8.743060195969449E-4 0.0 0.0 13.430464568748556 0.0 36 8.743060195969449E-4 0.0 0.0 13.71761164575618 0.0 37 8.743060195969449E-4 0.0 0.0 14.009255153721734 0.0 38 8.743060195969449E-4 0.0 0.0 14.29752633846884 0.0 39 8.743060195969449E-4 0.0 0.0 14.59516508771163 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATCGG 30 2.1646738E-6 45.000004 2 CGATCGA 30 2.1646738E-6 45.000004 41 CTCGTAG 25 3.889741E-5 45.0 1 CCGATCG 35 1.2113014E-7 45.0 40 CGTTGCG 20 7.0320023E-4 45.0 41 TCGTGCA 20 7.0320023E-4 45.0 36 TATAGCG 20 7.0320023E-4 45.0 1 TTACGAG 25 3.889741E-5 45.0 1 CCGCCTA 20 7.0320023E-4 45.0 27 CGATATT 20 7.0320023E-4 45.0 10 CGATAGA 35 1.2113014E-7 45.0 10 CGAATAT 125 0.0 41.399998 14 TGTTACG 60 3.6379788E-12 41.250004 1 CCACGCT 60 3.6379788E-12 41.250004 12 AACACGT 50 1.0804797E-9 40.5 41 GTACGAG 45 1.9270374E-8 40.0 1 CTACGAA 130 0.0 39.80769 11 GCTACGA 130 0.0 39.80769 10 TCGTTGA 40 3.4564619E-7 39.375 24 CTATCGT 40 3.4564619E-7 39.375 32 >>END_MODULE