##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551351_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 544720 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.549708106917315 31.0 31.0 34.0 30.0 34.0 2 31.70176604494052 31.0 31.0 34.0 30.0 34.0 3 31.674631003084155 31.0 31.0 34.0 30.0 34.0 4 35.40613159054193 37.0 35.0 37.0 33.0 37.0 5 33.34667902775738 37.0 35.0 37.0 30.0 37.0 6 34.24909311205757 37.0 35.0 37.0 30.0 37.0 7 35.31835438390366 37.0 35.0 37.0 32.0 37.0 8 35.05865582317521 37.0 35.0 37.0 32.0 37.0 9 36.83889704802467 39.0 37.0 39.0 32.0 39.0 10 36.53144000587458 38.0 35.0 39.0 32.0 39.0 11 36.65500991334998 39.0 35.0 39.0 32.0 39.0 12 36.59306249082097 39.0 35.0 39.0 32.0 39.0 13 36.58863085621971 39.0 35.0 39.0 32.0 39.0 14 37.57104567484212 39.0 36.0 41.0 33.0 41.0 15 37.68055331179321 39.0 36.0 41.0 33.0 41.0 16 37.82712402702306 39.0 36.0 41.0 33.0 41.0 17 37.61221728594507 39.0 36.0 41.0 33.0 41.0 18 37.64507453370539 39.0 36.0 41.0 33.0 41.0 19 37.541057791158764 39.0 36.0 41.0 33.0 41.0 20 37.53082133940373 39.0 35.0 41.0 33.0 41.0 21 37.504953003377885 39.0 35.0 41.0 33.0 41.0 22 37.59265494198854 39.0 35.0 41.0 33.0 41.0 23 37.592998237626674 39.0 35.0 41.0 33.0 41.0 24 37.50476391540608 39.0 35.0 41.0 33.0 41.0 25 37.2858239095315 39.0 35.0 41.0 32.0 41.0 26 37.321484432368926 39.0 35.0 41.0 32.0 41.0 27 36.870964899397855 39.0 35.0 41.0 32.0 41.0 28 36.91312784549861 39.0 35.0 41.0 31.0 41.0 29 37.19753267733881 39.0 35.0 41.0 32.0 41.0 30 36.93751468644441 39.0 35.0 41.0 31.0 41.0 31 36.937072257306504 39.0 35.0 41.0 31.0 41.0 32 36.84667719195183 39.0 35.0 41.0 31.0 41.0 33 36.82794463210457 39.0 35.0 41.0 31.0 41.0 34 36.71802761051549 39.0 35.0 41.0 31.0 41.0 35 36.640938463797916 39.0 35.0 41.0 31.0 41.0 36 36.44589330298135 39.0 35.0 41.0 30.0 41.0 37 36.41720333382288 39.0 35.0 41.0 30.0 41.0 38 36.274443750917904 39.0 35.0 41.0 30.0 41.0 39 36.21184645322367 39.0 35.0 41.0 30.0 41.0 40 36.14128910265825 39.0 35.0 41.0 30.0 41.0 41 35.94716000881186 39.0 35.0 40.0 29.0 41.0 42 36.10165406080188 39.0 35.0 41.0 30.0 41.0 43 35.98366683800852 39.0 35.0 41.0 30.0 41.0 44 36.1278601850492 39.0 35.0 41.0 30.0 41.0 45 36.13061756498752 39.0 35.0 41.0 30.0 41.0 46 36.016072477603174 39.0 35.0 41.0 30.0 41.0 47 35.901086796886474 38.0 35.0 41.0 30.0 41.0 48 35.930542296959906 38.0 35.0 40.0 30.0 41.0 49 35.895524306065504 38.0 35.0 40.0 29.0 41.0 50 35.77934902335144 38.0 35.0 40.0 29.0 41.0 51 34.96276252019386 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 6 1.0 7 1.0 8 9.0 9 28.0 10 16.0 11 28.0 12 28.0 13 35.0 14 49.0 15 55.0 16 70.0 17 116.0 18 256.0 19 486.0 20 1123.0 21 1866.0 22 2646.0 23 3415.0 24 4143.0 25 5083.0 26 5831.0 27 6263.0 28 6524.0 29 7331.0 30 8797.0 31 11657.0 32 15630.0 33 22233.0 34 38669.0 35 46444.0 36 45512.0 37 63931.0 38 105492.0 39 140916.0 40 36.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.2191584667352 19.148553385225437 21.376670583051844 13.255617564987515 2 30.955903950653546 29.967506241738874 22.547180202672934 16.529409604934646 3 30.67539286238802 28.395689528565132 25.569834043178147 15.359083565868703 4 27.33459391981201 23.504919958877956 31.414855338522546 17.745630782787487 5 27.653289763548244 32.182405639594656 23.153363195770304 17.010941401086797 6 24.90600675576443 37.37204435306212 24.29890585989132 13.423043031282125 7 72.09410339256866 6.743097371126449 16.513988838302247 4.648810398002643 8 71.58852254369216 12.362681744749596 10.656484065207813 5.392311646350419 9 65.41415773241297 8.92733881627258 12.916911440740197 12.74159201057424 10 42.94022617124394 24.05823175209282 19.471288001174916 13.530254075488324 11 33.71420179174622 23.319136437068586 24.878102511381993 18.0885592598032 12 28.807460713761195 21.13397708914672 28.17888089293582 21.879681304156264 13 25.573138493170806 25.21313702452636 30.73156851226318 18.482155970039653 14 19.53352180936995 30.95002937288882 28.213026876193275 21.303421941547953 15 18.396423850785727 25.417829343515937 34.83716404758408 21.348582758114258 16 20.83106917315318 25.806652959318548 29.202158907328535 24.160118960199735 17 20.11822587751505 28.51538405052137 28.15354677632545 23.212843295638123 18 20.520450873843444 25.954618886767513 29.97705243060655 23.547877808782495 19 22.260978117197826 26.85177705977383 26.991114701130858 23.89613012189749 20 25.873109120281978 25.945256278454988 30.713026876193272 17.46860772506976 21 22.815574974298723 30.126303421941547 29.011602291085325 18.046519312674402 22 21.593846379791454 24.157365251872523 31.01354824496989 23.235240123366133 23 23.330518431487736 26.219525627845496 28.652151564106333 21.797804376560435 24 21.75301072110442 26.869033631957702 29.02280070494933 22.355154941988545 25 19.006645616096343 31.48241298281686 27.362681744749594 22.148259656337203 26 19.37747833749449 26.986158026141872 30.26215303275077 23.374210603612866 27 22.972169187839626 27.33330885592598 28.33547510647672 21.359046849757675 28 17.441254222352768 27.939859010133645 31.73244969892789 22.886437068585696 29 19.977970333382288 23.902371860772504 30.806469378763403 25.3131884270818 30 18.44507269789984 28.9868189161404 31.37171390806286 21.196394477896902 31 22.21104420619768 25.50007343222206 27.103649581436333 25.185232780143927 32 23.59469085034513 26.352805110882656 26.623219268615067 23.429284770157143 33 23.262593626083124 24.70865765898076 28.27140549273021 23.757343222205904 34 19.66111029519753 25.98362461448083 28.034219415479512 26.321045674842118 35 21.539506535467766 24.007930679982376 28.387428403583492 26.06513438096637 36 22.10089587310912 27.511565574974302 28.040093993244238 22.347444558672343 37 19.720039653399912 26.36198413864004 30.456197679541784 23.46177852841827 38 19.318365398736965 26.77632545160817 28.965156410632986 24.940152739021883 39 22.419408136290205 26.353723013658392 27.66522249963284 23.561646350418563 40 20.1797253634895 24.920142458510792 29.69048318402115 25.209648993978558 41 20.36936407695697 26.290754883242766 26.93659127625202 26.403289763548244 42 20.74790718167132 23.895579380232046 29.278161257159642 26.078352180937 43 23.604971361433396 23.23322073725951 28.17722866793949 24.9845792333676 44 21.002533411661037 23.924768688500514 30.14576296078719 24.926934939051257 45 20.003304449992658 24.33488764870025 28.315648406520783 27.34615949478631 46 22.83852254369217 27.5154207666324 27.182405639594652 22.463651050080777 47 19.148002643559995 25.24379497723601 33.218350712292555 22.38985166691144 48 21.028601850491995 24.378579820825376 29.19004259068879 25.40277573799383 49 20.40204141577324 23.238177412248497 32.495410486121315 23.864370685856954 50 21.24908209722426 23.602951975326775 30.00605815831987 25.141907769129094 51 20.384050521368778 22.972903510060213 27.704692318989572 28.938353649581437 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 258.0 1 694.0 2 1130.0 3 3341.0 4 5552.0 5 3771.0 6 1990.0 7 1868.5 8 1747.0 9 1765.5 10 1784.0 11 1748.0 12 1712.0 13 1759.0 14 1806.0 15 1682.5 16 1559.0 17 1480.0 18 1401.0 19 1521.0 20 1641.0 21 2276.5 22 2912.0 23 2767.5 24 2623.0 25 3276.5 26 4758.0 27 5586.0 28 6877.5 29 8169.0 30 9053.0 31 9937.0 32 11154.5 33 12372.0 34 14130.0 35 15888.0 36 15339.5 37 14791.0 38 15854.0 39 16917.0 40 19672.0 41 22427.0 42 26361.5 43 30296.0 44 33576.5 45 36857.0 46 50149.0 47 63441.0 48 55999.5 49 48558.0 50 47135.5 51 45713.0 52 40321.5 53 34930.0 54 31515.0 55 28100.0 56 27187.5 57 26275.0 58 24104.5 59 21934.0 60 20991.5 61 20049.0 62 17850.0 63 15651.0 64 13830.5 65 12010.0 66 10010.0 67 8010.0 68 7261.5 69 6513.0 70 5625.5 71 4738.0 72 3594.5 73 2451.0 74 1897.0 75 1055.0 76 767.0 77 640.5 78 514.0 79 350.0 80 186.0 81 155.0 82 124.0 83 114.5 84 105.0 85 56.5 86 8.0 87 10.5 88 13.0 89 7.5 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 544720.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.03078388917858 #Duplication Level Percentage of deduplicated Percentage of total 1 74.8326054513449 20.976165912708158 2 10.345805865067389 5.800020967262005 3 3.6082452846357684 3.034258313783187 4 1.8595371081795102 2.0849713125315175 5 1.0611572598480843 1.4872534911617286 6 0.70650519309808 1.18823366305888 7 0.569793785636493 1.1180236526601435 8 0.4287687714761998 0.9614979817342363 9 0.3375076644838178 0.8514543963678561 >10 5.401333685403245 38.70727472961711 >50 0.7630689988417038 13.083475813704021 >100 0.07039626969296833 3.3558495559836428 >500 0.010625852029127294 2.247285507285435 >1k 0.0026564630072818235 1.7159938540554291 >5k 0.0019923472554613676 3.388240848086664 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCG 7005 1.2859817888089293 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGC 5674 1.0416360699074754 No Hit GAATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTC 5522 1.0137318255250403 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3216 0.5903950653546777 No Hit GCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 3164 0.5808488764870025 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCT 1428 0.26215303275077106 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTTCTACGT 1410 0.2588485827581143 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTC 999 0.18339697459245116 No Hit CCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 995 0.18266265237186077 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTA 988 0.18137758848582758 No Hit GAACTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCT 982 0.180276105154942 No Hit CTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGCT 938 0.17219856072844764 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCC 908 0.1666911440740197 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 766 0.14062270524306067 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 720 0.13217799970627112 No Hit GCTAAAGGTGTAATTTGAAATGGCCTTCGGGTAAATGCAAGATACTTAACT 685 0.12575268027610514 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 652 0.11969452195623441 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 631 0.11583933029813483 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 612 0.11235129975033045 No Hit TCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTTCTGC 581 0.10666030254075488 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTTCTACGTCGTATGCCGTCTT 551 0.10115288588632691 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1806432662652372 0.0 2 0.0 0.0 0.0 1.1741812307240418 0.0 3 0.0 0.0 0.0 1.4484505801145542 0.0 4 0.0 0.0 0.0 1.9821192539286239 0.0 5 0.0 0.0 0.0 3.9513878689969157 0.0 6 0.0 0.0 0.0 4.642568659127625 0.0 7 0.0 0.0 0.0 5.4679468350712295 0.0 8 0.0 0.0 0.0 6.4433103245704215 0.0 9 0.0 0.0 0.0 6.76457629607872 0.0 10 0.0 0.0 0.0 8.861433396974592 0.0 11 0.0 0.0 0.0 10.059480099867821 0.0 12 0.0 0.0 0.0 12.03517403436628 0.0 13 0.0 0.0 0.0 12.480540461154355 0.0 14 0.0 0.0 0.0 12.686334263474812 0.0 15 0.0 0.0 0.0 13.173006315171097 0.0 16 0.0 0.0 0.0 13.779556469378763 0.0 17 0.0 0.0 0.0 14.48156851226318 0.0 18 0.0 0.0 0.0 15.19349390512557 0.0 19 0.0 0.0 0.0 15.92653106182993 0.0 20 0.0 0.0 0.0 16.410449405199003 0.0 21 0.0 0.0 0.0 16.92117050961962 0.0 22 0.0 0.0 0.0 17.468791305624908 0.0 23 0.0 0.0 0.0 17.959134968424145 0.0 24 0.0 0.0 0.0 18.381920986929064 0.0 25 0.0 0.0 0.0 18.77074460273168 0.0 26 0.0 0.0 0.0 19.138640035247466 0.0 27 0.0 0.0 0.0 19.546923189895725 0.0 28 0.0 0.0 0.0 19.937399030694667 0.0 29 0.0 0.0 0.0 20.313004846526656 0.0 30 0.0 0.0 0.0 20.742950506682334 0.0 31 0.0 0.0 0.0 21.113416066970185 0.0 32 0.0 0.0 0.0 21.481311499485976 0.0 33 0.0 0.0 0.0 21.84994125422235 0.0 34 0.0 0.0 0.0 22.220773975620503 0.0 35 0.0 0.0 0.0 22.616573652518724 0.0 36 0.0 0.0 0.0 23.001725657218387 0.0 37 0.0 0.0 0.0 23.35107945366427 0.0 38 0.0 0.0 0.0 23.700616830665297 0.0 39 0.0 0.0 0.0 24.08338228814804 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ATTACGG 30 2.1633914E-6 45.000004 2 TCTATTG 30 2.1633914E-6 45.000004 18 AGACTTA 35 1.2103555E-7 45.0 20 CGGGTAT 40 6.8030204E-9 45.0 6 AATTTCG 20 7.0300145E-4 45.0 39 ATTAGCG 20 7.0300145E-4 45.0 1 TTAATCG 35 1.2103555E-7 45.0 20 CGTTGAT 35 1.2103555E-7 45.0 25 ACCGAAT 20 7.0300145E-4 45.0 39 TACGGGT 25 3.888095E-5 45.0 4 CGACACG 20 7.0300145E-4 45.0 40 ACGGGTA 40 6.8030204E-9 45.0 5 TCGATAG 40 6.8030204E-9 45.0 1 CTGAACG 25 3.888095E-5 45.0 34 CCCCGTA 20 7.0300145E-4 45.0 40 TACGCCT 25 3.888095E-5 45.0 29 TACGATA 20 7.0300145E-4 45.0 1 TGTTCGT 20 7.0300145E-4 45.0 33 ACAGCGA 25 3.888095E-5 45.0 45 CGAATGT 20 7.0300145E-4 45.0 45 >>END_MODULE