##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551345_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 556101 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.547058897574363 31.0 31.0 34.0 30.0 34.0 2 31.688031490682448 31.0 31.0 34.0 30.0 34.0 3 31.639311923553453 31.0 31.0 34.0 30.0 34.0 4 35.36548756430936 37.0 35.0 37.0 33.0 37.0 5 33.404960609673424 37.0 35.0 37.0 30.0 37.0 6 34.264041963600135 37.0 35.0 37.0 30.0 37.0 7 35.301607082166726 37.0 35.0 37.0 32.0 37.0 8 35.171788937621045 37.0 35.0 37.0 32.0 37.0 9 36.95767135826046 39.0 37.0 39.0 33.0 39.0 10 36.54973826696949 38.0 35.0 39.0 32.0 39.0 11 36.659801007370966 39.0 35.0 39.0 32.0 39.0 12 36.55356490997139 39.0 35.0 39.0 32.0 39.0 13 36.56067512915819 39.0 35.0 39.0 32.0 39.0 14 37.51402532993107 39.0 36.0 41.0 33.0 41.0 15 37.63464730327764 39.0 36.0 41.0 33.0 41.0 16 37.721816720343966 39.0 36.0 41.0 33.0 41.0 17 37.54069134923332 39.0 36.0 41.0 33.0 41.0 18 37.502137201695376 39.0 36.0 41.0 33.0 41.0 19 37.38884303390931 39.0 36.0 41.0 32.0 41.0 20 37.44780894118155 39.0 35.0 41.0 33.0 41.0 21 37.33844751223249 39.0 35.0 41.0 33.0 41.0 22 37.48123812041338 39.0 35.0 41.0 33.0 41.0 23 37.50648713093485 39.0 35.0 41.0 33.0 41.0 24 37.415480281459665 39.0 35.0 41.0 33.0 41.0 25 37.14498805073179 39.0 35.0 41.0 32.0 41.0 26 37.19207302270631 39.0 35.0 41.0 33.0 41.0 27 36.78040140190361 39.0 35.0 41.0 32.0 41.0 28 36.80692895714987 39.0 35.0 41.0 31.0 41.0 29 36.989550459359 39.0 35.0 41.0 32.0 41.0 30 36.70541861999889 39.0 35.0 41.0 31.0 41.0 31 36.68503383378199 39.0 35.0 41.0 31.0 41.0 32 36.65978482326052 39.0 35.0 41.0 31.0 41.0 33 36.591050906220275 39.0 35.0 41.0 31.0 41.0 34 36.43428801602587 39.0 35.0 41.0 30.0 41.0 35 36.35678590759592 39.0 35.0 41.0 30.0 41.0 36 36.175513081256824 39.0 35.0 41.0 30.0 41.0 37 36.20451141069698 39.0 35.0 41.0 30.0 41.0 38 35.986754204721805 39.0 35.0 41.0 29.0 41.0 39 35.91617529909135 39.0 35.0 41.0 29.0 41.0 40 35.81181476026837 38.0 35.0 40.0 29.0 41.0 41 35.64509144921516 38.0 35.0 40.0 28.0 41.0 42 35.77487722553997 38.0 35.0 40.0 29.0 41.0 43 35.711946211209835 38.0 35.0 40.0 29.0 41.0 44 35.80794855610761 38.0 35.0 40.0 29.0 41.0 45 35.78475492761207 38.0 35.0 40.0 29.0 41.0 46 35.66892704742484 38.0 35.0 40.0 28.0 41.0 47 35.57529117912034 38.0 35.0 40.0 28.0 41.0 48 35.54440470346214 38.0 35.0 40.0 28.0 41.0 49 35.52808572543477 38.0 35.0 40.0 28.0 41.0 50 35.43680914078558 38.0 35.0 40.0 28.0 41.0 51 34.56026872816269 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 18.0 9 36.0 10 46.0 11 34.0 12 29.0 13 30.0 14 37.0 15 46.0 16 85.0 17 139.0 18 246.0 19 448.0 20 863.0 21 1513.0 22 2393.0 23 3394.0 24 4458.0 25 5588.0 26 6692.0 27 7539.0 28 7761.0 29 8435.0 30 10155.0 31 12571.0 32 16698.0 33 23903.0 34 43294.0 35 49598.0 36 46368.0 37 65879.0 38 105126.0 39 132645.0 40 32.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.557918435679845 19.784715366453216 22.972265829408688 15.685100368458249 2 32.67266198046757 27.543198088117087 22.61243910728447 17.171700824130866 3 30.586889791602605 26.568015522360145 27.106406929676442 15.738687756360806 4 27.536005150143588 23.303860269986927 31.481151805157698 17.678982774711788 5 26.430450583617006 30.837024209630986 24.67573336498226 18.05679184176975 6 24.84656564185283 34.92638927101372 26.10281225892419 14.124232828209266 7 73.47550175237951 6.06040988957042 15.72160452867375 4.742483829376319 8 73.08150857488118 9.100864770967863 12.533514595370265 5.284112058780689 9 67.11586564311159 7.804517524694256 14.627558662904761 10.45205816928939 10 41.27199915123332 24.721768168012645 20.72249465474797 13.283738026006068 11 33.774260431108736 22.538891316505456 26.241276314914018 17.44557193747179 12 29.835227773372104 19.544651061587732 30.17761162091059 20.44250954412957 13 26.79890883130942 22.193989940676246 31.798720016687614 19.20838121132672 14 19.054811985592547 28.411745348416922 30.88503707060408 21.64840559538645 15 18.79586621854663 23.949606276557674 36.68254507724316 20.57198242765253 16 21.65182224092386 23.920115230866333 32.15351168223039 22.27455084597942 17 21.58870421020642 25.326154781235783 30.08967795418458 22.995463054373218 18 22.768525861309367 23.85304108426347 30.52035511534775 22.858077939079415 19 23.275268341542272 25.822287677957785 28.535463881561085 22.366980098938864 20 26.673571887121224 25.38118075673304 29.868135464600854 18.07711189154488 21 23.733997960802082 27.968480545800134 29.43637936274166 18.861142130656123 22 21.703971041231718 23.14849280975938 31.737759867362225 23.40977628164668 23 22.66386861379498 25.345395890314887 30.963260271065867 21.02747522482427 24 23.341263547449113 23.589240084085443 30.13751099170834 22.9319853767571 25 20.975686071415083 27.085007939205287 28.760962487030234 23.178343502349392 26 20.097428344851025 25.89961176117288 31.09201386079147 22.910946033184622 27 21.9176012990446 26.636887903456387 28.889356429857166 22.55615436764185 28 19.228341614203178 26.89996960983706 31.095430506328885 22.776258269630876 29 20.922098683512527 25.436386555679636 30.51837705740504 23.1231377034028 30 21.181404097457115 27.008762796686213 29.262669910681694 22.547163195174978 31 24.28857347855875 25.50400017263051 25.800169393689277 24.40725695512146 32 25.115581522061643 27.285511085216534 26.242175432160703 21.35673196056112 33 23.296667332013428 26.099035966488103 26.393227129604153 24.211069571894313 34 20.981260598344544 26.848540103326552 27.749635407956468 24.42056389037243 35 20.273835148651052 28.317517860964102 26.70252346246455 24.706123527920287 36 21.25351330064143 30.083743780356446 27.312844249515827 21.349898669486297 37 21.970109746251133 27.257998097467905 27.567294430328303 23.20459772595266 38 21.745510258028666 28.552906756146818 25.121875342788453 24.579707643036066 39 22.277607844618156 25.808081625460122 26.90230731467845 25.012003215243272 40 22.149034078341884 25.888103060415286 27.870117119012555 24.092745742230278 41 18.179431434217886 27.456343362087104 28.28011458350192 26.084110620193098 42 21.022799815141493 26.390349954414756 28.9125536548217 23.67429657562205 43 22.552917545553775 24.217183569171787 28.160172342793842 25.06972654248059 44 21.81366334532756 24.603264514899273 27.843862895409288 25.73920924436388 45 21.470200557093047 24.684544713999795 26.683102529936107 27.16215219897105 46 21.88037784503175 27.53906214878232 26.568195345809485 24.01236466037644 47 19.97263087101084 26.015418062546193 30.63580176982239 23.37614929662058 48 20.64984598121564 24.379743967372832 30.051015912577032 24.91939413883449 49 21.51839324151548 23.259443878000578 31.207100868367437 24.015062012116502 50 19.53224324358345 24.299362885518995 30.715463557878874 25.45293031301868 51 19.2409292556568 24.12061837687758 28.634366778696673 28.004085588768945 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 281.0 1 884.0 2 1487.0 3 4824.5 4 8162.0 5 5292.0 6 2422.0 7 2383.5 8 2345.0 9 2271.0 10 2197.0 11 2210.5 12 2224.0 13 2087.0 14 1950.0 15 2069.0 16 2188.0 17 2216.5 18 2245.0 19 2189.0 20 2133.0 21 2652.5 22 3172.0 23 3043.0 24 2914.0 25 3208.0 26 4436.0 27 5370.0 28 5990.5 29 6611.0 30 7994.0 31 9377.0 32 10262.5 33 11148.0 34 11690.0 35 12232.0 36 13031.5 37 13831.0 38 15175.0 39 16519.0 40 19609.0 41 22699.0 42 24712.5 43 26726.0 44 30209.5 45 33693.0 46 45788.5 47 57884.0 48 53185.5 49 48487.0 50 47260.5 51 46034.0 52 42101.0 53 38168.0 54 34953.0 55 31738.0 56 29947.5 57 28157.0 58 26777.5 59 25398.0 60 25116.0 61 24834.0 62 22777.0 63 20720.0 64 17369.0 65 14018.0 66 11750.5 67 9483.0 68 7537.5 69 5592.0 70 4959.0 71 4326.0 72 3491.5 73 2657.0 74 1955.5 75 1053.0 76 852.0 77 636.0 78 420.0 79 363.0 80 306.0 81 251.0 82 196.0 83 156.5 84 117.0 85 66.5 86 16.0 87 12.0 88 8.0 89 6.0 90 4.0 91 3.5 92 3.0 93 2.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 556101.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.875015408078955 #Duplication Level Percentage of deduplicated Percentage of total 1 76.08449817324774 24.25194551588227 2 9.597131050582595 6.118174002213464 3 3.419436200083704 3.2698374469383307 4 1.651274271021528 2.1053757132710222 5 1.0151451209785958 1.6178883186314459 6 0.6858815548073954 1.3117491076561727 7 0.548988911201891 1.2249321002397335 8 0.4562199007454751 1.1633613092587416 9 0.36755579315354564 1.0544261913088153 >10 5.770321629851357 43.58539722832958 >50 0.34768913917931027 6.756932011483567 >100 0.04673854002082528 2.4721457847397716 >500 0.005129839758383262 1.2819475753012293 >1k 0.0039898753676314265 3.785887694745892 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4708 0.8466087994806699 No Hit GAATCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTC 4457 0.8014731136969723 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCG 3916 0.704188627605417 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGC 3438 0.6182330188221205 No Hit GCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 1755 0.31559015358720804 No Hit GAATGCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTT 1447 0.2602045311912764 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCC 1117 0.20086279290992107 No Hit GAACTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCT 969 0.17424892240797984 No Hit GAATGACTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCT 962 0.17299015826261777 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCACGCACATT 871 0.15662622437291066 No Hit CCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 849 0.152670108487487 No Hit GAATGATCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTC 736 0.1323500587123562 No Hit CTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGCT 734 0.13199041181368132 No Hit TCTGTCTCTTATACACATCTGACGCACGCACATTCGTATGCCGTCTTCTGC 698 0.12551676763753347 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCACGCACATTCGTA 695 0.12497729728952116 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.798234493374405E-4 0.0 0.0 0.13774476219247941 0.0 2 1.798234493374405E-4 0.0 0.0 0.8246703386615022 0.0 3 1.798234493374405E-4 0.0 0.0 1.1204799128215917 0.0 4 1.798234493374405E-4 0.0 0.0 1.6791913699130194 0.0 5 1.798234493374405E-4 0.0 0.0 3.4479348175960842 0.0 6 1.798234493374405E-4 0.0 0.0 4.414485857784827 0.0 7 1.798234493374405E-4 0.0 0.0 5.209665150754989 0.0 8 1.798234493374405E-4 0.0 0.0 6.198694122110911 0.0 9 1.798234493374405E-4 0.0 0.0 6.586033831983758 0.0 10 1.798234493374405E-4 0.0 0.0 8.158769719889014 0.0 11 1.798234493374405E-4 0.0 0.0 9.552041805355502 0.0 12 1.798234493374405E-4 0.0 0.0 11.248316402955577 0.0 13 1.798234493374405E-4 0.0 0.0 11.787247280619887 0.0 14 1.798234493374405E-4 0.0 0.0 12.07442532921178 0.0 15 1.798234493374405E-4 0.0 0.0 12.528119891890142 0.0 16 1.798234493374405E-4 0.0 0.0 13.199400828266807 0.0 17 1.798234493374405E-4 0.0 0.0 13.864747590815337 0.0 18 1.798234493374405E-4 0.0 0.0 14.622163959424636 0.0 19 1.798234493374405E-4 0.0 0.0 15.28805019232118 0.0 20 1.798234493374405E-4 0.0 0.0 15.808459254703731 0.0 21 1.798234493374405E-4 0.0 0.0 16.354043599993528 0.0 22 1.798234493374405E-4 0.0 0.0 16.92192605300116 0.0 23 1.798234493374405E-4 0.0 0.0 17.437120235352932 0.0 24 1.798234493374405E-4 0.0 0.0 17.87570962828695 0.0 25 3.59646898674881E-4 0.0 0.0 18.27887380170149 0.0 26 3.59646898674881E-4 0.0 0.0 18.663695983283613 0.0 27 3.59646898674881E-4 0.0 0.0 19.037369111006814 0.0 28 3.59646898674881E-4 0.0 0.0 19.41787552980484 0.0 29 3.59646898674881E-4 0.0 0.0 19.805934533475035 0.0 30 3.59646898674881E-4 0.0 0.0 20.233195049100793 0.0 31 3.59646898674881E-4 0.0 0.0 20.630425048687197 0.0 32 3.59646898674881E-4 0.0 0.0 21.030712046912342 0.0 33 3.59646898674881E-4 0.0 0.0 21.44592439143249 0.0 34 3.59646898674881E-4 0.0 0.0 21.84423333171492 0.0 35 3.59646898674881E-4 0.0 0.0 22.225459044310295 0.0 36 3.59646898674881E-4 0.0 0.0 22.600750583077534 0.0 37 3.59646898674881E-4 0.0 0.0 22.987191175703693 0.0 38 3.59646898674881E-4 0.0 0.0 23.403482460919868 0.0 39 3.59646898674881E-4 0.0 0.0 23.875698838879988 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTATAGT 20 7.0301414E-4 45.000004 13 TCGTGCG 35 1.2104101E-7 45.000004 1 TCGAGCA 20 7.0301414E-4 45.000004 17 TTGGACG 25 3.8882004E-5 45.0 1 TGGATCG 25 3.8882004E-5 45.0 35 GTACGAG 25 3.8882004E-5 45.0 1 CGGGACG 30 2.1634733E-6 44.999996 6 TACGTAG 30 2.1634733E-6 44.999996 1 CATACGA 125 0.0 43.199997 18 CGTTTTT 2075 0.0 40.987953 1 CGATGAA 710 0.0 40.880283 19 TACGGGA 105 0.0 40.714287 4 GTTACGG 45 1.9252184E-8 40.000004 2 CGAGGGT 45 1.9252184E-8 40.000004 4 CTAGGGT 45 1.9252184E-8 40.000004 4 GCATATC 90 0.0 40.000004 28 GATGAAT 765 0.0 40.0 20 CGTGCGG 80 0.0 39.375004 2 TAGACGG 40 3.4539335E-7 39.375004 2 CGAATGC 80 0.0 39.375004 45 >>END_MODULE