SRR3551335_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551335_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	469409
Sequences flagged as poor quality	0
Sequence length	51
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGC	3318	0.7068462683928088	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCG	3229	0.6878862569741951	No Hit
GAATCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTC	2823	0.6013945194915309	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1989	0.4237243001305897	No Hit
GCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC	1795	0.38239573591473536	No Hit
CCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC	951	0.20259517819215225	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTTAGCCAGT	946	0.20153000901133128	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCC	923	0.19663023077955474	No Hit
CTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGCT	887	0.1889610126776436	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCT	659	0.14038929803220646	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTA	564	0.12015108359660766	No Hit
TCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCTGC	545	0.11610344070948789	No Hit
GAACTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTCTTCT	511	0.10886029027990515	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTTAGCCAGTCGTATGCCGTC	483	0.10289534286730762	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AACGTAT	20	7.029017E-4	45.0	22
CTATGCG	25	3.8872677E-5	45.0	1
GTACCTC	25	3.8872677E-5	45.0	34
CGGCGAA	35	1.2098826E-7	45.0	31
CGAACAC	25	3.8872677E-5	45.0	34
TTGTGCG	35	1.2098826E-7	45.0	1
GTACACG	20	7.029017E-4	45.0	1
GCGAACA	25	3.8872677E-5	45.0	33
TCCGACC	20	7.029017E-4	45.0	29
CGACCCT	20	7.029017E-4	45.0	12
GCACGAG	25	3.8872677E-5	45.0	1
TAACGAA	25	3.8872677E-5	45.0	24
GCGTTAG	20	7.029017E-4	45.0	1
GCGCAAA	20	7.029017E-4	45.0	30
CCGTCGA	25	3.8872677E-5	45.0	41
CGGATCT	20	7.029017E-4	45.0	6
CTACGCG	20	7.029017E-4	45.0	1
TACGACC	20	7.029017E-4	45.0	38
TACGAAG	25	3.8872677E-5	45.0	1
CAAGGCG	20	7.029017E-4	45.0	1