##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551330_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 840803 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.55839120459846 31.0 31.0 34.0 30.0 34.0 2 31.706838581689173 31.0 31.0 34.0 30.0 34.0 3 31.67340625568653 31.0 31.0 34.0 30.0 34.0 4 35.384926076619614 37.0 35.0 37.0 33.0 37.0 5 33.365598124649885 37.0 35.0 37.0 30.0 37.0 6 34.238879975452036 37.0 35.0 37.0 30.0 37.0 7 35.30935308270784 37.0 35.0 37.0 32.0 37.0 8 35.090201866549 37.0 35.0 37.0 32.0 37.0 9 36.74190268112745 39.0 37.0 39.0 32.0 39.0 10 36.439622598872745 38.0 35.0 39.0 32.0 39.0 11 36.60039985585208 39.0 35.0 39.0 32.0 39.0 12 36.64901290789876 39.0 35.0 39.0 32.0 39.0 13 36.694465885587945 39.0 35.0 39.0 32.0 39.0 14 37.80074167194932 40.0 37.0 41.0 33.0 41.0 15 37.82551322961502 40.0 37.0 41.0 33.0 41.0 16 37.99257019777522 40.0 37.0 41.0 33.0 41.0 17 37.666851807141505 40.0 36.0 41.0 32.0 41.0 18 37.688542976178724 39.0 36.0 41.0 33.0 41.0 19 37.57502173517459 39.0 36.0 41.0 32.0 41.0 20 37.31065659851356 39.0 35.0 41.0 31.0 41.0 21 37.441878775408746 39.0 35.0 41.0 32.0 41.0 22 37.49513976520065 39.0 36.0 41.0 32.0 41.0 23 37.31425316037169 40.0 35.0 41.0 32.0 41.0 24 37.376940852970314 39.0 35.0 41.0 32.0 41.0 25 37.32362872159115 39.0 35.0 41.0 32.0 41.0 26 37.176678722602084 39.0 35.0 41.0 31.0 41.0 27 36.640879016844615 39.0 35.0 41.0 30.0 41.0 28 36.6391069013788 39.0 35.0 41.0 30.0 41.0 29 36.893676640069074 39.0 35.0 41.0 30.0 41.0 30 36.71188970543635 39.0 35.0 41.0 30.0 41.0 31 36.619325811159094 39.0 35.0 41.0 30.0 41.0 32 36.43784453671074 39.0 35.0 41.0 30.0 41.0 33 36.21922138717393 39.0 35.0 41.0 27.0 41.0 34 36.0445062636551 40.0 35.0 41.0 27.0 41.0 35 35.89023944966895 40.0 35.0 41.0 25.0 41.0 36 35.81160033919955 39.0 35.0 41.0 25.0 41.0 37 35.502821707344054 39.0 35.0 41.0 23.0 41.0 38 35.56448300017959 39.0 35.0 41.0 24.0 41.0 39 35.28435792926524 39.0 35.0 41.0 23.0 41.0 40 35.48549065595627 39.0 35.0 41.0 23.0 41.0 41 35.248033130233836 39.0 35.0 41.0 23.0 41.0 42 35.281075352966155 39.0 35.0 41.0 23.0 41.0 43 35.26077927885605 39.0 35.0 41.0 23.0 41.0 44 35.48822613620551 39.0 35.0 41.0 23.0 41.0 45 35.47145288492072 39.0 35.0 41.0 23.0 41.0 46 35.32113229852891 39.0 35.0 41.0 23.0 41.0 47 35.130301628324354 39.0 35.0 41.0 22.0 41.0 48 35.243071206929564 39.0 35.0 41.0 23.0 41.0 49 35.24445559780353 39.0 35.0 41.0 23.0 41.0 50 35.0833108349994 39.0 35.0 41.0 22.0 41.0 51 34.3369647824758 38.0 34.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 13.0 9 33.0 10 33.0 11 37.0 12 44.0 13 49.0 14 37.0 15 83.0 16 102.0 17 146.0 18 379.0 19 834.0 20 2319.0 21 4916.0 22 8278.0 23 10942.0 24 12458.0 25 13175.0 26 13483.0 27 12412.0 28 11240.0 29 11170.0 30 13212.0 31 16374.0 32 21590.0 33 28905.0 34 46896.0 35 58302.0 36 63980.0 37 92984.0 38 159675.0 39 236615.0 40 87.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 47.71783640163035 17.737448605678143 20.189271446462488 14.355443546229022 2 29.48181678704762 33.570884023962805 22.162979913249593 14.784319275739977 3 27.557465898670674 32.7433417816064 26.006567531276648 13.692624788446285 4 24.529051394916525 22.099588131821605 37.137712401121306 16.23364807214056 5 30.94946140772571 29.51190706978924 23.30641065743105 16.232220865054 6 22.77679789439381 40.278043727246455 24.188424636924463 12.756733741435273 7 71.40864150104127 4.644369727510487 20.337344181692977 3.60964458975527 8 72.13972833113107 13.906824785354003 10.252342106296005 3.7011047772189207 9 66.68066122504321 7.058371580501022 11.076197397012141 15.184769797443634 10 39.93039986774548 31.36049704865468 17.379219626951855 11.329883456647991 11 30.43067163176154 21.995758816274442 30.54330205767582 17.030267494288196 12 23.522156795349208 19.81807867003329 31.75333579923002 24.906428735387482 13 26.90570799580877 20.975900419004216 35.10905646150168 17.009335123685336 14 18.127432942080368 32.13095100754874 29.689237550294184 20.052378500076713 15 16.59116344732357 25.33411512565964 34.831464683165976 23.243256743850818 16 19.073433372621174 25.703048157535118 29.54164055075921 25.681877919084496 17 18.860660582800016 31.30424130265948 30.301152588656322 19.53394552588418 18 18.841869022826987 25.62288669284006 30.179126382755534 25.35611790157742 19 19.55392642509601 26.926402498563874 28.260365388800945 25.259305687539175 20 27.50620537747843 25.32019985656569 31.540325141561105 15.633269624394774 21 22.11921222926179 31.92709826201857 29.43055626585538 16.52313324286426 22 20.103044351649554 22.203298513444885 36.163286762773204 21.530370372132353 23 24.757523462689836 26.25299862155582 30.94743953101975 18.042038384734592 24 20.715078323935572 29.042237004387474 29.479557042493905 20.763127629183053 25 18.65514276233553 35.01985601859175 27.24514541456203 19.079855804510686 26 18.873981182274562 26.369910668729773 33.93220528470998 20.82390286428569 27 25.041775540762817 28.407367718716515 27.397499771052196 19.153356969468472 28 17.294181871377717 32.10383407290412 31.125602548991854 19.47638150672631 29 20.470669110362355 23.802840855705796 33.78924670820632 21.93724332572553 30 18.359591961493955 33.56077464043302 29.11514349972586 18.964489898347175 31 20.85744223081982 26.80187868026161 26.722549753033707 25.618129335884866 32 28.559603141282796 27.560914982463192 25.48956176417068 18.38992011208333 33 24.805691701861196 25.88525492891914 26.182827606466674 23.126225762752988 34 20.33591697460642 25.036066712416584 29.186622787977683 25.441393524999317 35 25.81948446901355 26.494434487032038 26.29510123060931 21.3909798133451 36 18.989466022361956 34.236438261994785 25.5172733684347 21.256822347208562 37 21.27454350186667 28.996328509769825 28.905225124077816 20.82390286428569 38 19.683802269972873 28.50227698997268 25.539038276504723 26.274882463549726 39 22.664167468479537 28.234675661242882 27.951969724180337 21.149187146097244 40 21.7864351102458 24.91998720270979 28.25227788197711 25.041299805067297 41 18.359829829341713 28.74930274987125 28.338386042866166 24.552481377920866 42 23.390615875538025 26.404639374502707 29.126680090342212 21.078064659617056 43 21.538457878956187 28.845639228213983 26.281185961515362 23.33471693131447 44 20.964363828387864 26.298193512630185 29.641426112894457 23.09601654608749 45 20.382420138843464 25.591488136935762 28.107654230539143 25.918437493681633 46 24.462567331467657 28.64464089685693 25.72528880130066 21.16750297037475 47 18.43000084443086 28.872280427163084 31.729430080530157 20.968288647875898 48 20.838769604770675 27.245621150257556 28.881795141073475 23.033814103898298 49 21.62694471832284 24.08840120694146 32.456354223284166 21.82829985145153 50 20.567362390476724 26.064488352206165 30.07862721707701 23.289522040240104 51 19.333303996298774 24.469465499052692 29.304129504771037 26.8931009998775 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 283.0 1 765.0 2 1247.0 3 6782.5 4 12318.0 5 8109.5 6 3901.0 7 3811.5 8 3722.0 9 3525.0 10 3328.0 11 3330.5 12 3333.0 13 3176.5 14 3020.0 15 2997.0 16 2974.0 17 2866.5 18 2759.0 19 3028.5 20 3298.0 21 3616.0 22 3934.0 23 4127.0 24 4320.0 25 5329.5 26 8627.5 27 10916.0 28 12202.0 29 13488.0 30 14801.0 31 16114.0 32 19193.5 33 22273.0 34 25108.5 35 27944.0 36 29701.0 37 31458.0 38 32634.5 39 33811.0 40 38049.0 41 42287.0 42 44167.0 43 46047.0 44 50812.5 45 55578.0 46 80926.0 47 106274.0 48 87187.5 49 68101.0 50 66478.5 51 64856.0 52 58507.0 53 52158.0 54 48713.0 55 45268.0 56 41631.5 57 37995.0 58 34842.5 59 31690.0 60 30024.5 61 28359.0 62 24670.0 63 20981.0 64 16803.0 65 12625.0 66 9829.0 67 7033.0 68 5515.0 69 3997.0 70 3249.5 71 2502.0 72 2183.0 73 1864.0 74 1538.0 75 886.5 76 561.0 77 459.0 78 357.0 79 245.0 80 133.0 81 104.5 82 76.0 83 69.0 84 62.0 85 32.5 86 3.0 87 2.5 88 2.0 89 1.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 840803.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 28.867237594647992 #Duplication Level Percentage of deduplicated Percentage of total 1 76.13065040068697 21.976815733517142 2 8.122974922121434 4.689756941044934 3 2.963526235971484 2.5664644791528506 4 1.609114497338315 1.8580276204663084 5 1.135144517750506 1.6384243249082986 6 0.8594449605721687 1.4885881125815803 7 0.6682409817481699 1.3503189833423679 8 0.5698878728023973 1.3160870901196269 9 0.48494479906184207 1.2599115061326318 >10 7.1089013236088165 46.49392595961249 >50 0.30110357318168424 5.238790682920207 >100 0.03685273212499152 1.9861103498390942 >500 0.00460659151562394 0.8430904851042573 >1k 0.0029314673281243256 2.1686550347412203 >5k 8.375620937498073E-4 2.0917686641466826 >10k+ 8.375620937498073E-4 3.033264032370364 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTC 13568 1.6136954792026192 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCG 11523 1.3704756048682034 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGC 9962 1.1848197496916637 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7341 0.8730939352024196 No Hit GAACTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCT 3648 0.4338709543139118 No Hit GCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTTCTGC 3639 0.4328005489989927 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCAAGCTGAT 2672 0.3177914446071196 No Hit GAATGACTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCT 2271 0.2700989411312757 No Hit GAATGCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTCTT 2239 0.2662930555671186 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCAAGCTGATCGTATGCCGTC 1834 0.218124816395755 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCAAGCTGATCGTA 1636 0.19457589946753281 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAAAACCGATCGAATGC 904 0.10751626718743867 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.3786784775982009E-4 0.0 0.0 0.08265907709653747 0.0 2 2.3786784775982009E-4 0.0 0.0 0.6646027666409373 0.0 3 2.3786784775982009E-4 0.0 0.0 0.8312291939966913 0.0 4 2.3786784775982009E-4 0.0 0.0 1.4243526723858027 0.0 5 2.3786784775982009E-4 0.0 0.0 3.5342404820154067 0.0 6 2.3786784775982009E-4 0.0 0.0 4.209785169653296 0.0 7 2.3786784775982009E-4 0.0 0.0 4.816467115364717 0.0 8 2.3786784775982009E-4 0.0 0.0 5.491179265535447 0.0 9 2.3786784775982009E-4 0.0 0.0 5.697410689543211 0.0 10 2.3786784775982009E-4 0.0 0.0 7.588222211386021 0.0 11 2.3786784775982009E-4 0.0 0.0 8.190979337609404 0.0 12 2.3786784775982009E-4 0.0 0.0 9.971420178091657 0.0 13 2.3786784775982009E-4 0.0 0.0 10.24544393871097 0.0 14 2.3786784775982009E-4 0.0 0.0 10.383764092183306 0.0 15 2.3786784775982009E-4 0.0 0.0 10.740327995975276 0.0 16 2.3786784775982009E-4 0.0 0.0 11.069893899046507 0.0 17 2.3786784775982009E-4 0.0 0.0 11.444654693192103 0.0 18 2.3786784775982009E-4 0.0 0.0 11.839277452625645 0.0 19 2.3786784775982009E-4 0.0 0.0 12.462729081604133 0.0 20 2.3786784775982009E-4 0.0 0.0 12.75804201459795 0.0 21 2.3786784775982009E-4 0.0 0.0 13.047646119245531 0.0 22 2.3786784775982009E-4 0.0 0.0 13.395527846594268 0.0 23 2.3786784775982009E-4 0.0 0.0 13.704042445138754 0.0 24 2.3786784775982009E-4 0.0 0.0 13.948689526559729 0.0 25 2.3786784775982009E-4 0.0 0.0 14.178469867495716 0.0 26 2.3786784775982009E-4 0.0 0.0 14.414910508168976 0.0 27 2.3786784775982009E-4 0.0 0.0 14.683582242213694 0.0 28 2.3786784775982009E-4 0.0 0.0 14.91217324391088 0.0 29 2.3786784775982009E-4 0.0 0.0 15.15134936483338 0.0 30 2.3786784775982009E-4 0.0 0.0 15.44166707302424 0.0 31 2.3786784775982009E-4 0.0 0.0 15.682151467109419 0.0 32 2.3786784775982009E-4 0.0 0.0 15.94249782648254 0.0 33 2.3786784775982009E-4 0.0 0.0 16.173229638809566 0.0 34 2.3786784775982009E-4 0.0 0.0 16.42013646478426 0.0 35 3.568017716397301E-4 0.0 0.0 16.68298043655886 0.0 36 3.568017716397301E-4 0.0 0.0 16.93904517467231 0.0 37 3.568017716397301E-4 0.0 0.0 17.18690347203804 0.0 38 3.568017716397301E-4 0.0 0.0 17.440470597750007 0.0 39 3.568017716397301E-4 0.0 0.0 17.698914014341053 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACTA 20 7.0322043E-4 45.000004 41 CGTCTAC 20 7.0322043E-4 45.000004 42 CCTCGTA 65 0.0 45.000004 40 CGTAATC 20 7.0322043E-4 45.000004 11 CTCGACG 20 7.0322043E-4 45.000004 1 TTACGCG 20 7.0322043E-4 45.000004 1 ATCGCGT 20 7.0322043E-4 45.000004 15 TCGGTAA 20 7.0322043E-4 45.000004 22 ATGACCG 25 3.88991E-5 45.0 18 TCGACAC 35 1.2114106E-7 45.0 34 CCGACCG 30 2.1648048E-6 44.999996 40 TCGAATA 60 0.0 44.999996 44 GCGTACG 30 2.1648048E-6 44.999996 1 CGATCGA 835 0.0 44.191616 41 CGATGAA 4390 0.0 43.769928 19 CCGATCG 905 0.0 43.756905 40 CCGATGA 4300 0.0 43.48256 18 ATCGAAT 970 0.0 43.37629 43 CCGCGCC 120 0.0 43.124996 40 CGTAAGC 105 0.0 42.857143 43 >>END_MODULE