##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551325_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 687001 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.580572662921888 31.0 31.0 34.0 30.0 34.0 2 31.74611245107358 31.0 31.0 34.0 30.0 34.0 3 31.704578304835074 31.0 31.0 34.0 30.0 34.0 4 35.4029659345474 37.0 35.0 37.0 33.0 37.0 5 33.30993404667533 37.0 35.0 37.0 30.0 37.0 6 34.26526744502555 37.0 35.0 37.0 30.0 37.0 7 35.374377912113665 37.0 35.0 37.0 32.0 37.0 8 35.195548478095375 37.0 35.0 37.0 32.0 37.0 9 37.0265487240921 39.0 37.0 39.0 33.0 39.0 10 36.651066010093146 38.0 35.0 39.0 32.0 39.0 11 36.786921707537545 39.0 37.0 39.0 33.0 39.0 12 36.79383727243483 39.0 35.0 39.0 33.0 39.0 13 36.83724768959579 39.0 37.0 39.0 33.0 39.0 14 37.89571485339905 40.0 37.0 41.0 33.0 41.0 15 37.94991273666268 40.0 37.0 41.0 33.0 41.0 16 38.07283832192384 40.0 37.0 41.0 33.0 41.0 17 37.88829565022467 40.0 37.0 41.0 33.0 41.0 18 37.87998852985658 39.0 37.0 41.0 33.0 41.0 19 37.77857674151857 39.0 37.0 41.0 33.0 41.0 20 37.76215755144461 39.0 36.0 41.0 33.0 41.0 21 37.738045505028374 39.0 36.0 41.0 33.0 41.0 22 37.84245292219371 40.0 36.0 41.0 33.0 41.0 23 37.83248932679865 40.0 36.0 41.0 33.0 41.0 24 37.77152580563929 40.0 36.0 41.0 33.0 41.0 25 37.52906473207462 39.0 35.0 41.0 33.0 41.0 26 37.568987526946835 39.0 36.0 41.0 33.0 41.0 27 37.126462698016454 40.0 35.0 41.0 32.0 41.0 28 37.16628651195558 40.0 35.0 41.0 32.0 41.0 29 37.42305178595082 40.0 36.0 41.0 32.0 41.0 30 37.17036074183298 39.0 35.0 41.0 32.0 41.0 31 37.143184653297446 39.0 35.0 41.0 32.0 41.0 32 37.089279346027155 39.0 35.0 41.0 32.0 41.0 33 37.056491911947724 40.0 35.0 41.0 32.0 41.0 34 36.85776876598433 40.0 35.0 41.0 31.0 41.0 35 36.79940349431806 40.0 35.0 41.0 31.0 41.0 36 36.629769097861576 40.0 35.0 41.0 30.0 41.0 37 36.549761936299944 39.0 35.0 41.0 30.0 41.0 38 36.3599790975559 39.0 35.0 41.0 30.0 41.0 39 36.35896017618606 39.0 35.0 41.0 30.0 41.0 40 36.2711538993393 39.0 35.0 41.0 30.0 41.0 41 36.142579122883376 39.0 35.0 41.0 29.0 41.0 42 36.201180202066666 39.0 35.0 41.0 30.0 41.0 43 36.128074049382754 39.0 35.0 41.0 29.0 41.0 44 36.233022950476055 39.0 35.0 41.0 30.0 41.0 45 36.267330032998494 39.0 35.0 41.0 30.0 41.0 46 36.21744364273123 39.0 35.0 41.0 30.0 41.0 47 36.114240008384265 39.0 35.0 41.0 29.0 41.0 48 36.10905078740788 39.0 35.0 41.0 29.0 41.0 49 36.0811599983115 39.0 35.0 41.0 29.0 41.0 50 35.97625330967495 39.0 35.0 41.0 29.0 41.0 51 35.10378150832386 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 21.0 10 31.0 11 33.0 12 32.0 13 32.0 14 36.0 15 50.0 16 73.0 17 125.0 18 237.0 19 562.0 20 1267.0 21 2112.0 22 3079.0 23 3889.0 24 4868.0 25 6080.0 26 7181.0 27 7964.0 28 8400.0 29 9023.0 30 10878.0 31 14149.0 32 18390.0 33 25349.0 34 42312.0 35 52844.0 36 56105.0 37 81478.0 38 139801.0 39 190518.0 40 73.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.88785314722977 20.23126603891406 22.510593143241422 12.370287670614745 2 32.28452360331353 28.867498009464327 23.101421977551706 15.746556409670436 3 29.776812551946797 28.065606891401906 26.54741405034345 15.610166506307852 4 26.597923438248273 23.568670205720224 32.57666291606562 17.25674343996588 5 27.49006187763919 31.970113580620698 23.646544910414978 16.893279631325136 6 24.7797310338704 36.99921834174914 24.94727081911089 13.27377980526957 7 73.48417251212153 5.9388559841979855 16.10070436578695 4.47626713789354 8 73.7699071762632 10.868397571473695 10.730406505958506 4.63128874630459 9 68.29174921142764 8.006393003794754 12.39823522818744 11.303622556590165 10 37.758023641886986 30.964001508003626 18.787454457853773 12.490520392255615 11 29.05032161525238 22.716269699752985 30.588165082729134 17.6452436022655 12 25.108697076132348 20.168238474179805 32.62513446123077 22.097929988457075 13 24.14421521948294 24.14377853889587 34.45133267637165 17.26067356524954 14 18.8903655162074 30.020917000120818 29.972445454955672 21.116272028716114 15 17.30667058708794 25.97186903658073 36.19849170525225 20.52296867107908 16 19.138836770252155 25.663281421715546 31.391220682357083 23.80666112567522 17 19.12384407009597 27.476670339635607 31.484670327990788 21.91481526227764 18 19.739272577478054 25.96764779090569 32.00155458288998 22.291525048726278 19 20.876388826217138 25.71058848531516 30.074774272526533 23.33824841594117 20 23.646690470610668 25.871286941358164 33.304318334325565 17.1777042537056 21 22.014378436130368 29.14173341814641 31.218586290267407 17.625301855455813 22 20.267364967445463 23.370271658993218 33.48277513424289 22.87958823931843 23 20.581774990138296 27.29544789600015 31.324554112730553 20.798223001131003 24 20.737815519919184 26.294430430232268 31.61582006430849 21.35193398554005 25 18.852228744936326 31.090493318059213 28.769535997764194 21.287741939240263 26 18.664601652690465 27.201561569779376 32.17229669243567 21.96154008509449 27 21.709284265961767 28.766188113263297 29.00781803811057 20.516709582664365 28 16.997791851831366 28.969681266839498 32.900388791282694 21.13213809004645 29 21.192400011062578 24.77026962115048 31.724844650881153 22.312485716905798 30 19.605502757637908 30.037947543016674 29.265605144679558 21.090944554665857 31 21.890506709597222 28.381909196638723 26.199525182641654 23.5280589111224 32 22.884537285971927 30.69660742851903 26.52965570646913 19.889199579039914 33 22.73533808538852 28.09588341210566 26.163426254110256 23.005352248395564 34 23.012339137788736 27.578562476619396 27.525724125583512 21.883374260008356 35 22.03999703057201 27.94071624349892 26.87667121299678 23.142615512932295 36 24.451783912978293 29.526303455162367 26.11277130600974 19.9091413258496 37 19.790364206165638 29.653377506000716 28.804324884534378 21.75193340329927 38 19.200554293225192 32.25089919810888 25.853383037288157 22.69516347137777 39 22.86168433524842 29.98918487746015 27.271576023906807 19.877554763384627 40 21.133011451220597 29.004615713805364 28.61262210680916 21.24975072816488 41 21.872311685135827 26.773323474056077 27.705345407066368 23.649019433741728 42 21.4577562478075 27.555272845308814 29.208399987772943 21.77857091911074 43 24.160517961400345 26.293993749645196 27.21844655247955 22.32704173647491 44 21.169110379751995 26.1430478267135 29.33561959880699 23.352222194727517 45 20.80943113619922 27.05643805467532 27.52368628284384 24.610444526281622 46 24.127039116391387 28.646974312992267 26.765317663293064 20.460668907323278 47 19.39749723799529 27.661240667771953 32.21028790351106 20.730974190721703 48 22.001132458322477 26.774487955621606 28.95963761333681 22.264741972719108 49 20.383522003606984 25.162263228146685 32.800825617429965 21.653389150816373 50 21.300114555874007 24.976819538836185 29.913202455309378 23.809863449980423 51 20.562706604502758 24.430095443820317 28.340278980671062 26.666918971005867 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 384.0 1 824.0 2 1264.0 3 4911.0 4 8558.0 5 5673.0 6 2788.0 7 2715.5 8 2643.0 9 2572.5 10 2502.0 11 2485.5 12 2469.0 13 2456.0 14 2443.0 15 2206.5 16 1970.0 17 2027.5 18 2085.0 19 2284.0 20 2483.0 21 2628.0 22 2773.0 23 3561.5 24 4350.0 25 5142.0 26 7192.5 27 8451.0 28 9564.0 29 10677.0 30 12754.5 31 14832.0 32 17469.0 33 20106.0 34 21613.5 35 23121.0 36 24055.0 37 24989.0 38 26380.5 39 27772.0 40 31193.5 41 34615.0 42 37547.0 43 40479.0 44 43952.5 45 47426.0 46 64475.0 47 81524.0 48 73591.0 49 65658.0 50 61792.0 51 57926.0 52 50555.0 53 43184.0 54 38479.5 55 33775.0 56 29899.5 57 26024.0 58 24551.0 59 23078.0 60 20552.5 61 18027.0 62 16803.0 63 15579.0 64 12946.5 65 10314.0 66 8206.0 67 6098.0 68 5286.5 69 4475.0 70 3608.5 71 2742.0 72 2086.5 73 1431.0 74 1276.5 75 823.5 76 525.0 77 422.5 78 320.0 79 178.0 80 36.0 81 25.0 82 14.0 83 12.0 84 10.0 85 16.5 86 23.0 87 12.0 88 1.0 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 687001.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.326976980895623 #Duplication Level Percentage of deduplicated Percentage of total 1 73.99073562193435 20.219431291401335 2 10.949258059977343 5.984202459257734 3 4.0652912809737884 3.3327636376741916 4 2.000377315230129 2.186570593855981 5 1.1442557917762115 1.5634525841062514 6 0.7101778965498254 1.1644209018814773 7 0.5126128442175645 0.9805711575831372 8 0.39596618023315344 0.865644695395564 9 0.3151510051820377 0.7750911837704096 >10 4.726805962371521 33.8405500476957 >50 1.111835674879673 19.23405220067755 >100 0.06837924005313077 3.3537654301949535 >500 0.0021536768520671106 0.48627685999799597 >1k 0.004845772917151 2.123286343912581 >5k 0.0021536768520671106 3.8899206125951644 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCG 7444 1.08355009672475 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGC 7272 1.0585137430658762 No Hit GAATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTC 6635 0.9657918984106282 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5087 0.7404647154807635 No Hit GCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 3313 0.482240928324704 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCAAAGAGT 2045 0.2976706001883549 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCT 1728 0.2515280181542676 No Hit GAACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCT 1316 0.19155721752952326 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCC 1253 0.18238692520098224 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTA 1247 0.1815135640268355 No Hit CTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGCT 1205 0.17540003580780814 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTC 1177 0.17132435032845658 No Hit GAATGCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTT 1147 0.16695754445772276 No Hit CCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 937 0.13638990336258608 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 901 0.13114973631770552 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 777 0.11310027205200576 No Hit TCTGTCTCTTATACACATCTGACGCGCAAAGAGTCGTATGCCGTCTTCTGC 690 0.1004365350268777 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.18748153205017168 0.0 2 0.0 0.0 0.0 1.028528342753504 0.0 3 0.0 0.0 0.0 1.2876254910837102 0.0 4 0.0 0.0 0.0 1.8077120702881073 0.0 5 0.0 0.0 0.0 3.658364398305097 0.0 6 0.0 0.0 0.0 4.336092669442984 0.0 7 0.0 0.0 0.0 5.119497642652631 0.0 8 0.0 0.0 0.0 6.069277919537235 0.0 9 0.0 0.0 0.0 6.360543871115181 0.0 10 0.0 0.0 0.0 8.237251474160882 0.0 11 0.0 0.0 0.0 9.43681304685146 0.0 12 0.0 0.0 0.0 11.524291813257914 0.0 13 0.0 0.0 0.0 11.98615431418586 0.0 14 0.0 0.0 0.0 12.201437843613038 0.0 15 0.0 0.0 0.0 12.685279934090344 0.0 16 0.0 0.0 0.0 13.274507606248026 0.0 17 0.0 0.0 0.0 13.999834061376912 0.0 18 0.0 0.0 0.0 14.703908727934893 0.0 19 0.0 0.0 0.0 15.520501425762117 0.0 20 0.0 0.0 0.0 16.04670153318554 0.0 21 0.0 0.0 0.0 16.593571188397107 0.0 22 0.0 0.0 0.0 17.21948002986895 0.0 23 0.0 0.0 0.0 17.779741223084102 0.0 24 0.0 0.0 0.0 18.224718741311875 0.0 25 0.0 0.0 0.0 18.617440149286537 0.0 26 0.0 0.0 0.0 19.044659323639994 0.0 27 0.0 0.0 0.0 19.455430195880357 0.0 28 0.0 0.0 0.0 19.866783308903482 0.0 29 0.0 0.0 0.0 20.280756505449045 0.0 30 0.0 0.0 0.0 20.73068307033032 0.0 31 0.0 0.0 0.0 21.159940087423454 0.0 32 0.0 0.0 0.0 21.579153451013898 0.0 33 0.0 0.0 0.0 21.99778457382158 0.0 34 0.0 0.0 0.0 22.411757770367146 0.0 35 0.0 0.0 0.0 22.807972623038395 0.0 36 0.0 0.0 0.0 23.21408556901664 0.0 37 0.0 0.0 0.0 23.60811701875252 0.0 38 0.0 0.0 0.0 24.011609881208326 0.0 39 0.0 0.0 0.0 24.4204884709047 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGATCG 20 7.031302E-4 45.000004 40 ATTCGCG 35 1.210974E-7 45.000004 1 ACGATTT 35 1.210974E-7 45.000004 38 CATAGCG 20 7.031302E-4 45.000004 1 CGAATTG 20 7.031302E-4 45.000004 44 TTTGCCG 20 7.031302E-4 45.000004 1 GGTCGAA 25 3.8891616E-5 45.0 42 CGTTAAG 25 3.8891616E-5 45.0 22 TACGAGA 25 3.8891616E-5 45.0 35 CGGTCGA 25 3.8891616E-5 45.0 41 AACACGT 25 3.8891616E-5 45.0 41 TCGTTAG 30 2.1642227E-6 44.999996 1 CCACGCT 30 2.1642227E-6 44.999996 43 CGATGAA 1130 0.0 43.00885 19 CCGATGA 1115 0.0 42.17489 18 TACGGCT 895 0.0 41.98324 7 ACGGCTG 915 0.0 41.557377 8 GTCGAAT 125 0.0 41.4 43 CGTATGG 60 3.6379788E-12 41.249996 2 TCGACGG 60 3.6379788E-12 41.249996 2 >>END_MODULE