##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551321_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 830220 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.456317602563175 31.0 31.0 34.0 30.0 34.0 2 31.613549420635493 31.0 31.0 34.0 30.0 34.0 3 31.56357591963576 31.0 31.0 34.0 30.0 34.0 4 35.2979800534798 37.0 35.0 37.0 33.0 37.0 5 33.292521259425214 35.0 35.0 37.0 30.0 37.0 6 34.205139601551394 36.0 35.0 37.0 29.0 37.0 7 35.25033485100335 37.0 35.0 37.0 32.0 37.0 8 34.993606513936065 37.0 35.0 37.0 32.0 37.0 9 36.72342391173424 39.0 37.0 39.0 32.0 39.0 10 36.365264628652646 38.0 35.0 39.0 32.0 39.0 11 36.59832333598323 38.0 35.0 39.0 32.0 39.0 12 36.61865890968659 39.0 35.0 39.0 32.0 39.0 13 36.654125412541255 39.0 35.0 39.0 32.0 39.0 14 37.69663462696634 39.0 37.0 41.0 33.0 41.0 15 37.74665148996652 40.0 37.0 41.0 33.0 41.0 16 37.87871287128713 40.0 37.0 41.0 33.0 41.0 17 37.61686540916865 39.0 36.0 41.0 32.0 41.0 18 37.60987087759871 39.0 36.0 41.0 33.0 41.0 19 37.42699886776999 39.0 36.0 40.0 32.0 41.0 20 37.27904169979042 39.0 35.0 41.0 32.0 41.0 21 37.359109633591096 39.0 35.0 41.0 32.0 41.0 22 37.47756377827564 39.0 35.0 41.0 33.0 41.0 23 37.38559056635591 39.0 35.0 41.0 32.0 41.0 24 37.314746693647464 39.0 35.0 41.0 32.0 41.0 25 37.17450796174508 39.0 35.0 41.0 32.0 41.0 26 37.16353858013539 39.0 35.0 41.0 32.0 41.0 27 36.69907735299078 39.0 35.0 41.0 31.0 41.0 28 36.7350593818506 39.0 35.0 41.0 31.0 41.0 29 36.941947917419476 39.0 35.0 41.0 31.0 41.0 30 36.65191274601913 39.0 35.0 41.0 31.0 41.0 31 36.603476187034765 39.0 35.0 40.0 30.0 41.0 32 36.402841415528414 39.0 35.0 41.0 30.0 41.0 33 36.158608561586085 39.0 35.0 41.0 29.0 41.0 34 35.84851364698514 39.0 35.0 41.0 27.0 41.0 35 35.75098407650984 39.0 35.0 41.0 26.0 41.0 36 35.48865963238659 39.0 35.0 41.0 25.0 41.0 37 35.3546903230469 39.0 35.0 41.0 24.0 41.0 38 35.25576594155766 39.0 35.0 40.0 23.0 41.0 39 35.00163932451639 39.0 35.0 40.0 23.0 41.0 40 34.85010840500109 38.0 34.0 40.0 23.0 41.0 41 34.658125557081256 38.0 34.0 40.0 22.0 41.0 42 34.719693575196935 38.0 34.0 40.0 23.0 41.0 43 34.56585483365855 37.0 34.0 40.0 22.0 41.0 44 34.641781696417816 37.0 34.0 40.0 23.0 41.0 45 34.52360338223603 37.0 34.0 40.0 23.0 41.0 46 34.331987906819876 37.0 34.0 40.0 23.0 41.0 47 34.114951458649514 36.0 33.0 40.0 22.0 41.0 48 34.13151815181518 36.0 33.0 40.0 23.0 41.0 49 34.05304858953048 36.0 33.0 40.0 23.0 41.0 50 33.91713883067139 35.0 33.0 40.0 23.0 41.0 51 33.05542265905423 35.0 32.0 39.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 37.0 10 39.0 11 37.0 12 34.0 13 36.0 14 51.0 15 69.0 16 94.0 17 183.0 18 408.0 19 893.0 20 2065.0 21 4016.0 22 5946.0 23 7584.0 24 9202.0 25 12125.0 26 14322.0 27 14440.0 28 13813.0 29 14404.0 30 16557.0 31 20338.0 32 25780.0 33 34630.0 34 55318.0 35 67392.0 36 75534.0 37 109730.0 38 156602.0 39 168469.0 40 57.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.939148659391485 18.817060538170605 20.521548505215485 14.722242297222424 2 33.269976632699766 31.47189901471899 20.674158656741586 14.583965695839657 3 27.50102382501024 30.24258630242586 28.33911493339115 13.91727493917275 4 25.11936595119366 21.357230613572305 37.65291127652911 15.870492158704922 5 28.63566283635663 29.319457493194573 26.092361060923608 15.952518609525185 6 22.30372672303727 38.354291633542914 26.8978102189781 12.444171424441715 7 67.62581002625811 5.547445255474453 22.54920382549204 4.277540892775409 8 66.82758786827588 13.299968682999685 14.632747946327479 5.239695502396955 9 61.98658186986582 7.429837874298379 16.182578111825784 14.401002144010022 10 39.416178844161784 21.861554768615548 24.0337500903375 14.688516296885162 11 30.782443207824432 22.14160102141601 28.93654693936547 18.13940883139409 12 24.802221098022212 19.843053648430537 32.2002601720026 23.15446508154465 13 24.80944809809448 22.639541326395413 35.636216906362165 16.914793669147937 14 18.75430608754306 30.082026450820265 30.577919105779188 20.585748355857483 15 17.301197273011972 24.255859892558597 37.577027775770276 20.86591505865915 16 19.097347690973475 24.070607790706077 31.237262412372623 25.59478210594782 17 19.050974440509744 28.92076798920768 31.801570668015707 20.22668690226687 18 18.87258798872588 25.297993302979933 32.68976897689769 23.139649731396496 19 19.608898846088987 27.14557587145576 29.55445544554455 23.691069836910696 20 22.419358724193586 26.116451061164508 34.92905494929055 16.535135265351354 21 20.216448652164487 31.11187396111874 31.33109296331093 17.340584423405843 22 18.67264098672641 23.434270434342704 34.904844499048444 22.988244079882442 23 21.42913926429139 26.9245501192455 32.00561297005613 19.640697646406977 24 20.40097805400978 26.556936715569368 31.175712461757126 21.866372768663727 25 17.624364626243647 32.64496157644962 28.846329888463302 20.88434390884344 26 18.316229433162295 25.713425357134252 33.952928139529284 22.01741707017417 27 23.192647731926478 26.822408518224083 29.701043097010434 20.28390065283901 28 16.98850906988509 27.849124328491243 33.35453253354533 21.807834068078343 29 23.313820433138204 22.623641926236417 32.46308207463082 21.599455565994553 30 20.93975090939751 30.242345402423453 30.03565320035653 18.782250487822505 31 21.64859916648599 25.79063380790634 26.473344414733447 26.087422610874228 32 26.683891016838913 28.03244923032449 26.055262460552626 19.228397292283972 33 22.822384428223845 28.212401532124016 25.997446459974466 22.967767579677677 34 21.76555611765556 27.980173929801737 26.900821469008214 23.353448483534482 35 25.330153453301534 27.415865674158656 26.33265881332659 20.92132205921322 36 22.067403820674038 31.700031317000317 25.140565151405653 21.09199971092 37 23.118691431186914 28.019681530196817 28.47775288477753 20.38387415383874 38 19.129748741297487 30.492038254920384 25.214039652140396 25.164173351641733 39 22.997277829972777 30.79412685794127 26.809881718098815 19.398713593987136 40 19.665148996651492 30.833273108332733 28.110500831105007 21.39107706391077 41 18.4180096841801 32.13919202139192 26.131266411312666 23.311531883115318 42 19.94326804943268 29.235624292356242 29.658524246585245 21.162583411625835 43 22.099443520994434 28.33875358338754 26.8603502686035 22.701452627014525 44 21.650887716508876 25.594059405940595 28.73154103731541 24.023511840235116 45 20.447471754474716 25.867842258678426 27.427790224277903 26.25689576256896 46 24.923875599238755 29.06217629062176 26.026474910264746 19.98747319987473 47 19.058201440582014 28.105923731059235 32.67916937679169 20.156705451567056 48 20.176941051769408 27.67856712678567 28.9106501891065 23.233841632338418 49 20.376044903760448 25.28558695285587 32.67025607670256 21.668112066681118 50 20.476018404760186 25.530100455301003 29.798125797981257 24.195755341957554 51 19.914841849148416 24.323552793235528 27.986798679867984 27.774806677748064 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 345.0 1 1021.0 2 1697.0 3 9446.5 4 17196.0 5 11460.5 6 5725.0 7 5498.5 8 5272.0 9 5211.0 10 5150.0 11 5041.0 12 4932.0 13 4839.0 14 4746.0 15 4540.0 16 4334.0 17 4230.0 18 4126.0 19 4151.0 20 4176.0 21 4826.0 22 5476.0 23 5310.5 24 5145.0 25 5762.5 26 7385.5 27 8391.0 28 9591.0 29 10791.0 30 13164.5 31 15538.0 32 16658.0 33 17778.0 34 20219.0 35 22660.0 36 23831.5 37 25003.0 38 26257.0 39 27511.0 40 31398.5 41 35286.0 42 38836.0 43 42386.0 44 47337.0 45 52288.0 46 82934.5 47 113581.0 48 95408.0 49 77235.0 50 75760.0 51 74285.0 52 64831.0 53 55377.0 54 48633.5 55 41890.0 56 37125.0 57 32360.0 58 29865.5 59 27371.0 60 25161.0 61 22951.0 62 19947.5 63 16944.0 64 14657.0 65 12370.0 66 10420.0 67 8470.0 68 7258.0 69 6046.0 70 4952.0 71 3858.0 72 3123.5 73 2389.0 74 1927.0 75 1051.5 76 638.0 77 502.5 78 367.0 79 271.0 80 175.0 81 137.5 82 100.0 83 54.0 84 8.0 85 5.0 86 2.0 87 3.5 88 5.0 89 2.5 90 0.0 91 0.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 830220.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.54424517893208 #Duplication Level Percentage of deduplicated Percentage of total 1 77.5094364645307 27.55014413376138 2 9.831973100388792 6.989401249457686 3 3.41823935102704 3.644962127195364 4 1.7053043095278584 2.4245501793019075 5 1.0192532362167288 1.8114293463753695 6 0.7337056153819947 1.5647407369378117 7 0.5361545777661771 1.3340046836149466 8 0.4300605523533045 1.222894217170625 9 0.34385351659252983 1.0999812329462582 >10 4.16984585011641 33.67841916051502 >50 0.24682653359283163 5.468992939600219 >100 0.04434626790828569 2.9070289649481214 >500 0.006187851336039825 1.4512539622835827 >1k 0.0034376951866887913 3.0683201352953646 >5k 0.0 0.0 >10k+ 0.0013750780746755165 5.783876930596396 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCG 13416 1.6159572161595719 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTC 11696 1.408783214087832 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGC 11599 1.3970995639709958 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10624 1.279660812796608 No Hit GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 4988 0.6008046060080461 No Hit GAACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCT 3686 0.44397870443978704 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCT 3033 0.36532485365324857 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCGAAAAT 3007 0.3621931536219315 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCGAAAATCGTA 2410 0.290284502902845 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTC 2202 0.26523090265230903 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC 2106 0.25366770253667703 No Hit CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT 1609 0.1938040519380405 No Hit CCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC 1048 0.12623160126231603 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 1022 0.12309990123099901 No Hit GAATGCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTT 953 0.11478885114788852 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 913 0.10997085109970851 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 857 0.1032256510322565 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.20464455204644552 0.0 2 0.0 0.0 0.0 1.1412637614126375 0.0 3 0.0 0.0 0.0 1.442027414420274 0.0 4 0.0 0.0 0.0 2.2314567223145674 0.0 5 0.0 0.0 0.0 4.615041796150418 0.0 6 0.0 0.0 0.0 5.424224904242249 0.0 7 0.0 0.0 0.0 6.4857507648575075 0.0 8 0.0 0.0 0.0 7.742646527426465 0.0 9 0.0 0.0 0.0 8.147358531473586 0.0 10 0.0 0.0 0.0 10.855556358555564 0.0 11 0.0 0.0 0.0 12.413938474139385 0.0 12 0.0 0.0 0.0 14.998675049986751 0.0 13 0.0 0.0 0.0 15.534316205343162 0.0 14 0.0 0.0 0.0 15.779070607790706 0.0 15 0.0 0.0 0.0 16.41143311411433 0.0 16 0.0 0.0 0.0 17.13148322131483 0.0 17 0.0 0.0 0.0 17.985714629857146 0.0 18 0.0 0.0 0.0 18.815976488159766 0.0 19 0.0 0.0 0.0 19.804027848040278 0.0 20 0.0 0.0 0.0 20.387126303871263 0.0 21 0.0 0.0 0.0 21.065741610657415 0.0 22 0.0 0.0 0.0 21.796511767965118 0.0 23 0.0 0.0 0.0 22.511623425116234 0.0 24 0.0 0.0 0.0 23.068102430681023 0.0 25 0.0 0.0 0.0 23.593264435932646 0.0 26 0.0 0.0 0.0 24.071089590710894 0.0 27 0.0 0.0 0.0 24.59119269591193 0.0 28 0.0 0.0 0.0 25.121413601214137 0.0 29 0.0 0.0 0.0 25.6236901062369 0.0 30 0.0 0.0 0.0 26.14692491146925 0.0 31 0.0 0.0 0.0 26.66546216665462 0.0 32 0.0 0.0 0.0 27.186649321866494 0.0 33 0.0 0.0 0.0 27.684830526848305 0.0 34 0.0 0.0 0.0 28.144226831442268 0.0 35 0.0 0.0 0.0 28.650598636505986 0.0 36 0.0 0.0 0.0 29.136373491363734 0.0 37 0.0 0.0 0.0 29.63973404639734 0.0 38 0.0 0.0 0.0 30.127074751270747 0.0 39 0.0 0.0 0.0 30.603936306039362 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AATCCGT 30 2.1647702E-6 45.000004 18 CGTATAT 30 2.1647702E-6 45.000004 22 CGTTCGG 20 7.032153E-4 45.000004 45 CCGTATA 30 2.1647702E-6 45.000004 21 TCCGTAT 30 2.1647702E-6 45.000004 20 CTACCCG 20 7.032153E-4 45.000004 34 CCGCGTA 20 7.032153E-4 45.000004 40 TCGACCG 20 7.032153E-4 45.000004 24 CGTCATA 30 2.1647702E-6 45.000004 38 GATTACG 20 7.032153E-4 45.000004 1 TCGAATA 20 7.032153E-4 45.000004 44 CCCTACG 25 3.889866E-5 45.0 32 GTACTAG 45 3.8380676E-10 45.0 1 CGATGCA 35 1.2113742E-7 45.0 10 GACGATA 25 3.889866E-5 45.0 22 CGATGAA 2295 0.0 42.941177 19 CGTTTTT 5540 0.0 42.847473 1 CCGATGA 2245 0.0 42.694874 18 GATGAAT 2495 0.0 42.65531 20 CGTAAGC 80 0.0 42.187504 43 >>END_MODULE