##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551304_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 520588 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.5897427524261 31.0 31.0 34.0 30.0 34.0 2 31.739484966998855 33.0 31.0 34.0 30.0 34.0 3 31.6789591769307 33.0 31.0 34.0 30.0 34.0 4 35.35044219229026 37.0 35.0 37.0 33.0 37.0 5 33.402804136860624 37.0 35.0 37.0 30.0 37.0 6 34.29930194318732 37.0 35.0 37.0 30.0 37.0 7 35.3530757528026 37.0 35.0 37.0 32.0 37.0 8 35.19766302719233 37.0 35.0 37.0 32.0 37.0 9 37.08736659316004 39.0 37.0 39.0 34.0 39.0 10 36.65810967598178 38.0 35.0 39.0 32.0 39.0 11 36.77516961589587 39.0 37.0 39.0 33.0 39.0 12 36.752583616986946 39.0 35.0 39.0 33.0 39.0 13 36.82348229309934 39.0 37.0 39.0 33.0 39.0 14 37.81651132949665 40.0 37.0 41.0 33.0 41.0 15 37.93818528279561 40.0 37.0 41.0 33.0 41.0 16 38.00132350342305 40.0 37.0 41.0 33.0 41.0 17 37.87749045310303 40.0 37.0 41.0 33.0 41.0 18 37.839239475362476 39.0 37.0 41.0 33.0 41.0 19 37.72711241903386 39.0 36.0 41.0 33.0 41.0 20 37.89292876516554 39.0 36.0 41.0 34.0 41.0 21 37.758847687614775 39.0 36.0 41.0 33.0 41.0 22 37.90058357088523 40.0 36.0 41.0 33.0 41.0 23 37.96925591830776 40.0 36.0 41.0 34.0 41.0 24 37.82593720946315 40.0 36.0 41.0 33.0 41.0 25 37.50547265784075 39.0 35.0 41.0 33.0 41.0 26 37.583230885076105 39.0 35.0 41.0 33.0 41.0 27 37.22994767455262 39.0 35.0 41.0 33.0 41.0 28 37.27799142508087 39.0 35.0 41.0 33.0 41.0 29 37.47844552698103 40.0 35.0 41.0 33.0 41.0 30 37.20748461355237 39.0 35.0 41.0 32.0 41.0 31 37.149021875264125 39.0 35.0 41.0 32.0 41.0 32 37.224822700484836 39.0 35.0 41.0 33.0 41.0 33 37.19597839366255 40.0 35.0 41.0 33.0 41.0 34 37.054872567174044 40.0 35.0 41.0 32.0 41.0 35 37.022670518721135 40.0 35.0 41.0 32.0 41.0 36 36.811997203162576 39.0 35.0 41.0 31.0 41.0 37 36.80610194626077 39.0 35.0 41.0 31.0 41.0 38 36.650504813787485 39.0 35.0 41.0 31.0 41.0 39 36.59960659869225 39.0 35.0 41.0 31.0 41.0 40 36.50620644348314 39.0 35.0 41.0 31.0 41.0 41 36.30008375145028 39.0 35.0 41.0 30.0 41.0 42 36.49107931800195 39.0 35.0 41.0 31.0 41.0 43 36.41266029950748 39.0 35.0 41.0 31.0 41.0 44 36.475979085188285 39.0 35.0 41.0 31.0 41.0 45 36.481061799349966 39.0 35.0 41.0 31.0 41.0 46 36.357774285999675 39.0 35.0 41.0 31.0 41.0 47 36.2916029566567 39.0 35.0 41.0 31.0 41.0 48 36.27701176362114 39.0 35.0 41.0 31.0 41.0 49 36.230539313238104 39.0 35.0 41.0 31.0 41.0 50 36.13941158843462 39.0 35.0 41.0 30.0 41.0 51 35.21326269525998 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 19.0 9 30.0 10 38.0 11 37.0 12 36.0 13 32.0 14 38.0 15 39.0 16 67.0 17 121.0 18 177.0 19 317.0 20 576.0 21 947.0 22 1359.0 23 2095.0 24 2926.0 25 3905.0 26 5084.0 27 5852.0 28 6245.0 29 6947.0 30 8194.0 31 10191.0 32 13759.0 33 19965.0 34 34917.0 35 42785.0 36 44099.0 37 62842.0 38 105164.0 39 141751.0 40 33.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.30480917731488 21.900235887112267 23.49650779503177 14.298447140541082 2 33.49808293698664 25.325017096052925 23.818643533850185 17.358256433110252 3 31.979607674398945 24.25411265722606 27.726724396259616 16.039555272115376 4 28.61610332931224 24.353231346093263 28.601504452657377 18.429160871937118 5 24.95389828424781 32.75584531337641 25.009028252668138 17.28122814970764 6 24.98290394707523 35.01559774716282 25.55494940336696 14.446548902394984 7 73.78982996150508 7.192828109752818 13.800164429452849 5.217177499289265 8 73.66112933836354 8.298693016358426 12.314920820303197 5.725256824974837 9 67.92184990818075 8.8075407039732 15.135961643372495 8.134647744473558 10 39.77156599844791 25.59221495693331 21.089998232767563 13.546220811851214 11 30.82917777589956 25.37476853096883 25.690757374353616 18.105296318777995 12 29.143199612745583 21.605376996780564 29.65223939084266 19.599183999631187 13 25.00998870507964 24.43333307721269 30.175685955112296 20.380992262595374 14 18.726132757574128 29.152227865413728 29.83991179205053 22.28172758496162 15 17.834832919698496 27.154871030450185 35.548264654582894 19.46203139526843 16 20.077105119595533 25.102960498513223 33.6588626706724 21.161071711218852 17 19.69081115968866 26.72285953575572 29.769990856493045 23.816338448062577 18 19.929963810153133 26.77933413755215 31.212014107125018 22.07868794516969 19 22.354145696789015 26.66177476238407 29.182386071134946 21.801693469691962 20 25.497706439641327 26.14601181740647 30.055245222709704 18.301036520242494 21 23.533581258115824 27.48930056013585 29.351425695559634 19.625692486188694 22 20.24518429160872 26.79873527626453 29.411934197484385 23.544146234642366 23 21.849523999784857 26.32254297064089 29.560804321267494 22.26712870830676 24 22.58350173265615 24.678248442146188 29.79361798581604 22.94463183938162 25 20.56674375898023 27.697910823914494 27.157752387684695 24.577593029420576 26 19.177161210016365 29.857007844975296 28.78283786794932 22.182993077059017 27 22.715467893996788 28.900205152635095 28.435730366431805 19.94859658693631 28 18.8171836461847 27.833526704418848 30.67454493764743 22.674744711749025 29 20.428054430759065 27.1101139480741 30.553335843315637 21.9084957778512 30 22.073693592629873 28.40787724649819 27.989504176047085 21.52892498482485 31 20.90866481747562 27.845052133356894 26.161186965508232 25.08509608365925 32 22.513388706616364 28.794363296887365 26.41532267359217 22.276925322904102 33 22.66187464943487 28.842770098427163 26.139672831490547 22.355682420647423 34 20.250754915595444 27.565560481609257 27.359063213135915 24.824621389659384 35 21.711410943010595 26.761469722698177 26.79508555710082 24.732033777190406 36 21.185659292953353 30.68703081899698 25.212452073424668 22.914857814625 37 21.272484190953307 28.020814924662112 28.36926705955573 22.33743382482885 38 19.964732187449577 27.797797874710906 26.87730028352555 25.360169654313967 39 21.21677795108608 27.05728906544139 28.549255841471567 23.17667714200097 40 21.95536585553259 26.07205698172067 28.76055537200243 23.212021790744313 41 18.909963349135978 27.36021575602972 27.16543600697673 26.564384887857578 42 20.207534557077768 27.69445319523308 27.975673661321427 24.12233858636772 43 22.37008920681998 26.789130752149493 27.829876985255137 23.01090305577539 44 21.193535002727685 26.462576932238164 27.259560343304113 25.084327721730045 45 20.74846135523677 26.053616295419797 26.701537492220336 26.4963848571231 46 21.53315097543547 27.935526750520566 26.734577055176068 23.796745218867894 47 19.343703658171144 26.721514902379617 30.37008152320069 23.56469991624855 48 19.89231407562218 25.338079248849375 29.1714369136438 25.598169761884638 49 20.49067592798912 25.259322151106055 30.514725656373177 23.735276264531645 50 19.12145497014914 25.119288189508787 29.4645669896348 26.294689850707275 51 18.78107063551215 25.183638501079546 27.052486803383868 28.982804060024435 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 404.0 1 915.5 2 1427.0 3 4080.0 4 6733.0 5 4544.0 6 2355.0 7 2302.5 8 2250.0 9 2269.0 10 2288.0 11 2178.5 12 2069.0 13 2055.5 14 2042.0 15 1998.5 16 1955.0 17 2010.0 18 2065.0 19 2107.0 20 2149.0 21 2914.0 22 3679.0 23 3500.0 24 3321.0 25 4005.5 26 5347.0 27 6004.0 28 6586.5 29 7169.0 30 8485.0 31 9801.0 32 10499.5 33 11198.0 34 12279.0 35 13360.0 36 14236.0 37 15112.0 38 16956.5 39 18801.0 40 20999.5 41 23198.0 42 26048.5 43 28899.0 44 30829.5 45 32760.0 46 39723.5 47 46687.0 48 47935.5 49 49184.0 50 47037.5 51 44891.0 52 38962.5 53 33034.0 54 29303.5 55 25573.0 56 23337.5 57 21102.0 58 21401.0 59 21700.0 60 21497.0 61 21294.0 62 20266.5 63 19239.0 64 15642.5 65 12046.0 66 9489.0 67 6932.0 68 6158.0 69 5384.0 70 4752.5 71 4121.0 72 2998.0 73 1875.0 74 1759.5 75 1329.0 76 1014.0 77 793.5 78 573.0 79 462.0 80 351.0 81 227.5 82 104.0 83 74.5 84 45.0 85 51.0 86 57.0 87 31.5 88 6.0 89 3.0 90 0.0 91 1.0 92 2.0 93 1.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 520588.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.10182712184612 #Duplication Level Percentage of deduplicated Percentage of total 1 73.88328151364844 22.979050488321835 2 10.956286089310153 6.815210316944237 3 4.0737920954413624 3.801071324482816 4 1.8862804067306953 2.3466706845385468 5 1.093860708353171 1.7010533323290233 6 0.6987457968970423 1.3039362586325047 7 0.5360136601079668 1.166970293413818 8 0.43319147648754674 1.0778437129898357 9 0.354504806773738 0.9923172492726238 >10 5.618127533752281 42.77163009173515 >50 0.3965906225683438 7.453068267688084 >100 0.05870790318334537 3.323179960999967 >500 0.005620969453724558 1.1413961568176179 >1k 0.004996417292199607 3.126601861833965 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3860 0.7414692616810222 No Hit GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 2626 0.5044296065218561 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 1850 0.3553673922564485 No Hit GAATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 1707 0.32789845328743655 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC 1704 0.32732218184053413 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCG 1565 0.30062160480072536 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC 1557 0.29908488094231905 No Hit CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 1227 0.23569502178306068 No Hit TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 926 0.17787578661052503 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 883 0.16961589587159137 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 723 0.1388814187034661 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 650 0.12485881349550894 No Hit CGTTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC 576 0.11064411780525099 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 557 0.10699439864153612 No Hit ACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 540 0.1037288604424228 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.9209048230078296E-4 0.0 0.0 0.3690058164998041 0.0 2 1.9209048230078296E-4 0.0 0.0 1.4278085549417197 0.0 3 1.9209048230078296E-4 0.0 0.0 1.8402268204415007 0.0 4 1.9209048230078296E-4 0.0 0.0 2.408430467087217 0.0 5 1.9209048230078296E-4 0.0 0.0 3.9749283502501016 0.0 6 1.9209048230078296E-4 0.0 0.0 4.830115177453187 0.0 7 1.9209048230078296E-4 0.0 0.0 5.671471489930617 0.0 8 1.9209048230078296E-4 0.0 0.0 6.946952292407816 0.0 9 1.9209048230078296E-4 0.0 0.0 7.383766049159796 0.0 10 1.9209048230078296E-4 0.0 0.0 8.735314682628106 0.0 11 1.9209048230078296E-4 0.0 0.0 10.523484982366094 0.0 12 1.9209048230078296E-4 0.0 0.0 12.119372709320999 0.0 13 1.9209048230078296E-4 0.0 0.0 12.721576371333953 0.0 14 1.9209048230078296E-4 0.0 0.0 13.001452204046194 0.0 15 1.9209048230078296E-4 0.0 0.0 13.479373324010542 0.0 16 1.9209048230078296E-4 0.0 0.0 14.26406294420924 0.0 17 1.9209048230078296E-4 0.0 0.0 15.130198928903472 0.0 18 1.9209048230078296E-4 0.0 0.0 16.05012024864192 0.0 19 1.9209048230078296E-4 0.0 0.0 16.699386078818566 0.0 20 1.9209048230078296E-4 0.0 0.0 17.28410950694215 0.0 21 1.9209048230078296E-4 0.0 0.0 17.970832981167447 0.0 22 1.9209048230078296E-4 0.0 0.0 18.70423444259184 0.0 23 1.9209048230078296E-4 0.0 0.0 19.36733078749414 0.0 24 1.9209048230078296E-4 0.0 0.0 19.912483576263764 0.0 25 1.9209048230078296E-4 0.0 0.0 20.39712786310864 0.0 26 1.9209048230078296E-4 0.0 0.0 20.87408853066148 0.0 27 1.9209048230078296E-4 0.0 0.0 21.325501164068324 0.0 28 1.9209048230078296E-4 0.0 0.0 21.77345616879375 0.0 29 1.9209048230078296E-4 0.0 0.0 22.23754677403244 0.0 30 1.9209048230078296E-4 0.0 0.0 22.721806879912712 0.0 31 1.9209048230078296E-4 0.0 0.0 23.229502024633682 0.0 32 1.9209048230078296E-4 0.0 0.0 23.730089821509523 0.0 33 1.9209048230078296E-4 0.0 0.0 24.16075668282788 0.0 34 1.9209048230078296E-4 0.0 0.0 24.63483599314621 0.0 35 1.9209048230078296E-4 0.0 0.0 25.077220373884916 0.0 36 1.9209048230078296E-4 0.0 0.0 25.555909855778467 0.0 37 1.9209048230078296E-4 0.0 0.0 26.025378994521578 0.0 38 1.9209048230078296E-4 0.0 0.0 26.450667322335512 0.0 39 1.9209048230078296E-4 0.0 0.0 26.899966960437045 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGTA 30 2.163204E-6 45.000004 8 AACGGGC 30 2.163204E-6 45.000004 4 GTCGTAC 30 2.163204E-6 45.000004 9 TCACGGT 20 7.029726E-4 45.0 18 CGGGTAT 95 0.0 45.0 6 CACGGTC 20 7.029726E-4 45.0 19 ACGCATG 25 3.8878556E-5 45.0 1 CCGGCAT 20 7.029726E-4 45.0 36 CGTTGTA 20 7.029726E-4 45.0 19 CGCGCCT 35 1.21021E-7 45.0 17 ATTCGAC 20 7.029726E-4 45.0 30 TAACGCC 20 7.029726E-4 45.0 12 ACTTACG 45 3.8380676E-10 45.0 1 TTATCGC 35 1.21021E-7 45.0 31 ACGGGTA 55 1.8189894E-12 45.0 5 TATTGCG 35 1.21021E-7 45.0 1 ATCCGAC 20 7.029726E-4 45.0 15 ACGATTG 20 7.029726E-4 45.0 1 CTAACGA 20 7.029726E-4 45.0 20 TCTACGG 25 3.8878556E-5 45.0 2 >>END_MODULE