##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551303_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 217161 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.503833561274813 31.0 31.0 34.0 30.0 34.0 2 31.658014100137684 31.0 31.0 34.0 30.0 34.0 3 31.59607388066918 31.0 31.0 34.0 30.0 34.0 4 35.298336257431124 37.0 35.0 37.0 33.0 37.0 5 33.31775963455685 37.0 35.0 37.0 30.0 37.0 6 34.25212169772657 37.0 35.0 37.0 30.0 37.0 7 35.31419085379051 37.0 35.0 37.0 32.0 37.0 8 35.20542823066757 37.0 35.0 37.0 32.0 37.0 9 37.005802146794316 39.0 37.0 39.0 33.0 39.0 10 36.608953725576875 38.0 35.0 39.0 32.0 39.0 11 36.6650503543454 39.0 35.0 39.0 32.0 39.0 12 36.48584230133403 39.0 35.0 39.0 32.0 39.0 13 36.42721298944102 39.0 35.0 39.0 32.0 39.0 14 37.333605021159414 39.0 36.0 41.0 32.0 41.0 15 37.531039182910376 39.0 36.0 41.0 33.0 41.0 16 37.65855287091144 39.0 36.0 41.0 33.0 41.0 17 37.518348138017416 39.0 36.0 41.0 33.0 41.0 18 37.50671621515834 39.0 36.0 40.0 33.0 41.0 19 37.31651171250823 39.0 36.0 40.0 33.0 41.0 20 37.379386722293596 39.0 35.0 41.0 33.0 41.0 21 37.24816150229553 39.0 35.0 40.0 33.0 41.0 22 37.40760081230055 39.0 35.0 41.0 33.0 41.0 23 37.4780600568242 39.0 35.0 41.0 33.0 41.0 24 37.33744088487344 39.0 35.0 41.0 33.0 41.0 25 37.063169722003494 39.0 35.0 40.0 33.0 41.0 26 37.14973683119897 39.0 35.0 41.0 33.0 41.0 27 36.74921832189021 39.0 35.0 41.0 32.0 41.0 28 36.78573500766712 39.0 35.0 41.0 32.0 41.0 29 37.008136820147264 39.0 35.0 41.0 32.0 41.0 30 36.725355841978995 39.0 35.0 41.0 31.0 41.0 31 36.63618237160448 39.0 35.0 40.0 31.0 41.0 32 36.5992926906765 39.0 35.0 40.0 31.0 41.0 33 36.46796155847505 39.0 35.0 41.0 31.0 41.0 34 36.2569199810279 39.0 35.0 41.0 30.0 41.0 35 36.22323529547202 39.0 35.0 41.0 30.0 41.0 36 35.975419159057104 39.0 35.0 41.0 30.0 41.0 37 35.97814985195316 39.0 35.0 41.0 30.0 41.0 38 35.83882004595669 38.0 35.0 40.0 29.0 41.0 39 35.80576162386432 38.0 35.0 40.0 29.0 41.0 40 35.73060540336432 38.0 35.0 40.0 29.0 41.0 41 35.5246982653423 38.0 35.0 40.0 28.0 41.0 42 35.662678841965175 38.0 35.0 40.0 29.0 41.0 43 35.55997623882742 38.0 35.0 40.0 28.0 41.0 44 35.65852063676259 38.0 35.0 40.0 29.0 41.0 45 35.65336317294542 38.0 35.0 40.0 29.0 41.0 46 35.524260801893526 38.0 35.0 40.0 28.0 41.0 47 35.411464305285016 38.0 35.0 40.0 27.0 41.0 48 35.43472815100317 38.0 35.0 40.0 28.0 41.0 49 35.437914726861635 38.0 35.0 40.0 28.0 41.0 50 35.314071126951895 38.0 35.0 40.0 27.0 41.0 51 34.48814013565972 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 8.0 10 11.0 11 18.0 12 12.0 13 10.0 14 9.0 15 22.0 16 26.0 17 49.0 18 114.0 19 171.0 20 320.0 21 521.0 22 874.0 23 1240.0 24 1683.0 25 2318.0 26 2913.0 27 3238.0 28 3264.0 29 3213.0 30 3944.0 31 5028.0 32 6614.0 33 9544.0 34 17773.0 35 21127.0 36 17777.0 37 24733.0 38 40225.0 39 50346.0 40 9.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.398676557945485 19.451927371857746 22.138873923034062 15.010522147162705 2 34.87136272166733 25.26374441082883 24.099170661398688 15.76572220610515 3 28.829762250127782 26.801313311322016 29.506679376131075 14.862245062419127 4 26.088017645894062 22.798752998927064 33.67962018962889 17.433609165549985 5 24.542620452106963 31.732677598648007 26.942222590612495 16.782479358632536 6 23.589871109453355 33.50647676148111 28.259678303194402 14.643973825871129 7 71.47277826129002 6.008905834841431 17.04173401301339 5.476581890855172 8 71.16194896873748 8.510736274008684 14.082639147913302 6.244675609340535 9 66.18269394596635 7.538185954199879 16.052606130935114 10.22651396889865 10 42.79543748647317 21.47899484714106 21.564185097692494 14.161382568693273 11 33.13670502530381 22.211631001883394 27.08773674831116 17.563927224501636 12 27.970491939160347 20.115490350477298 31.8441156561261 20.06990205423626 13 23.292395964284562 26.26714741597248 34.04110314467147 16.39935347507149 14 17.607213081538582 30.375619931755704 33.05842209236465 18.958744894341066 15 16.602889100713295 23.48534036958754 41.597708612504086 18.314061917195076 16 18.60509023259241 22.775268119045318 36.66173944676991 21.957902201592365 17 17.8135116342253 23.641906235465854 32.993953794650054 25.5506283356588 18 20.295541096237354 23.603685744677914 35.0541763944723 21.04659676461243 19 21.464259236234867 26.32148498118907 30.329571147673846 21.884684634902214 20 25.281703436620756 24.749379492634496 31.8514834615792 18.117433609165552 21 20.78365820750503 27.35758262303084 33.804412394490726 18.054346774973407 22 19.866366428594453 23.559939399800147 31.83030102090154 24.743393150703856 23 19.730062027712158 26.228926925184542 31.541575144708307 22.499435902395 24 20.781355768300937 23.870308204511858 33.02342501646244 22.32491101072476 25 18.2030843475578 26.874530878012166 31.390535132919815 23.531849641510217 26 17.852192612854058 27.390277259728958 32.234148857299424 22.52338127011756 27 19.456992738106752 27.970491939160347 30.900576070288864 21.67193925244404 28 16.740114477277228 25.266046850032925 36.10777257426518 21.88606609842467 29 21.01804651848168 22.364052477194342 34.54349537900452 22.074405625319464 30 20.48894598938115 24.680306316511714 31.787936139546236 23.042811554560902 31 22.77711007040859 24.29948287215476 30.507779942070627 22.415627115366018 32 25.513789308393314 25.02705366064809 28.698062727653678 20.761094303304922 33 21.849687559000007 23.40153158255856 29.76363159130783 24.985149267133604 34 21.067318717449265 22.836052514033366 33.79105824710699 22.30557052141038 35 22.02052854794369 23.673219408641515 29.703768172001414 24.602483871413376 36 23.42363499891785 23.07182228853247 32.20329617196458 21.301246540585094 37 20.269753777151514 23.967471138924576 35.016416391525176 20.74635869239873 38 19.49751566809878 25.637660537573502 30.685067760785778 24.179756033541935 39 21.016665054959223 23.155631075561452 33.65337238270224 22.174331486777092 40 22.784017388020867 21.885145122743033 31.678800521272237 23.65203696796386 41 20.537757700507917 22.443256385815133 31.19022292216374 25.82876299151321 42 23.455408659934335 21.218358729237753 32.71259572390991 22.613636886918002 43 21.752985112428107 22.156372460985168 31.855167364305746 24.23547506228098 44 19.631978117617805 24.25067116102799 31.425071720981208 24.692279000372995 45 21.1078416474413 22.290834910504188 30.945243390848265 25.65608005120625 46 23.637761844898485 23.929250648136634 31.347709763723692 21.08527774324119 47 18.490428760228586 22.86368178448248 35.52986033403788 23.116029121251053 48 20.647814294463554 21.634639737337736 32.77844548514696 24.939100483051746 49 21.773246577424125 19.239642477240388 35.26323787420394 23.723873071131557 50 19.928532287104957 22.14578124064634 33.05980355588711 24.865882916361592 51 20.01418302549721 21.894815367400223 30.202476503607922 27.888525103494644 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 214.0 1 301.0 2 388.0 3 2068.0 4 3748.0 5 2487.5 6 1227.0 7 1217.5 8 1208.0 9 1201.5 10 1195.0 11 1171.5 12 1148.0 13 1151.0 14 1154.0 15 1108.0 16 1062.0 17 1067.5 18 1073.0 19 1002.5 20 932.0 21 964.5 22 997.0 23 1109.5 24 1222.0 25 1394.0 26 1719.0 27 1872.0 28 2225.5 29 2579.0 30 3091.5 31 3604.0 32 3567.0 33 3530.0 34 3910.0 35 4290.0 36 4911.0 37 5532.0 38 5978.5 39 6425.0 40 8057.0 41 9689.0 42 11613.5 43 13538.0 44 15045.5 45 16553.0 46 20943.0 47 25333.0 48 24431.0 49 23529.0 50 22505.0 51 21481.0 52 17830.5 53 14180.0 54 12154.5 55 10129.0 56 8929.5 57 7730.0 58 7501.5 59 7273.0 60 6805.5 61 6338.0 62 5815.0 63 5292.0 64 4652.5 65 4013.0 66 3124.5 67 2236.0 68 1877.0 69 1518.0 70 1409.0 71 1300.0 72 1187.0 73 1074.0 74 682.0 75 284.5 76 279.0 77 275.5 78 272.0 79 170.0 80 68.0 81 70.5 82 73.0 83 38.5 84 4.0 85 2.5 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 217161.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.80661352636984 #Duplication Level Percentage of deduplicated Percentage of total 1 76.64548985313408 27.44415433710473 2 10.176444867409142 7.287680568794581 3 3.5623344221816406 3.82665395720226 4 1.74901617839965 2.5050538540529836 5 0.9876797242727436 1.7682733087432827 6 0.6378764885928135 1.370411814276044 7 0.5015561099822526 1.2571318054346774 8 0.3382288639111088 0.968866417082257 9 0.3099359551428792 0.9987981267354635 >10 4.843231564597855 41.10913101339559 >50 0.20833869183878184 4.5938267000059865 >100 0.02957895007587644 2.132979678671585 >500 0.003858123922940405 0.8721639705103587 >1k 0.0064302065382340085 3.8648744479902004 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2286 1.0526752041112355 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCG 1753 0.8072351849549412 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGC 1540 0.7091512748605873 No Hit GAATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTC 1451 0.6681678570277352 No Hit GCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 1363 0.6276449270357016 No Hit CTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGCT 730 0.3361561237975511 Illumina Single End Adapter 1 (95% over 21bp) CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCC 586 0.269845874719678 No Hit CCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 578 0.2661619719931295 No Hit GAATGACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCT 409 0.18833952689479233 No Hit TCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 405 0.18649757553151808 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTA 375 0.1726829403069612 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGCTTCTGTT 355 0.16347318349058992 No Hit GAACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCT 346 0.15932879292322286 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTC 294 0.13538342520065758 No Hit ACTGTCTCTTATACACATCTGACGCGCTTCTGTTCGTATGCCGTCTTCTGC 259 0.11926635077200787 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3504312468629266 0.0 2 0.0 0.0 0.0 1.59282744139141 0.0 3 0.0 0.0 0.0 2.060222599822252 0.0 4 0.0 0.0 0.0 2.767071435478746 0.0 5 0.0 0.0 0.0 4.907879407444247 0.0 6 0.0 0.0 0.0 5.818263868742545 0.0 7 0.0 0.0 0.0 6.957971274768489 0.0 8 0.0 0.0 0.0 8.588098231266203 0.0 9 0.0 0.0 0.0 9.164629007971044 0.0 10 0.0 0.0 0.0 11.247415511993406 0.0 11 0.0 0.0 0.0 13.120219560602502 0.0 12 0.0 0.0 0.0 15.2808285097232 0.0 13 0.0 0.0 0.0 15.953601245159122 0.0 14 0.0 0.0 0.0 16.23634077942172 0.0 15 0.0 0.0 0.0 16.833133021122578 0.0 16 0.0 0.0 0.0 17.687337965841014 0.0 17 0.0 0.0 0.0 18.683833653372382 0.0 18 0.0 0.0 0.0 19.917941066766133 0.0 19 0.0 0.0 0.0 20.766620157394744 0.0 20 0.0 0.0 0.0 21.428341184651018 0.0 21 0.0 0.0 0.0 22.157753924507624 0.0 22 0.0 0.0 0.0 22.87058910209476 0.0 23 0.0 0.0 0.0 23.573293547183887 0.0 24 0.0 0.0 0.0 24.118511150713065 0.0 25 0.0 0.0 0.0 24.60110240789092 0.0 26 0.0 0.0 0.0 25.07770732313813 0.0 27 0.0 0.0 0.0 25.513328820552495 0.0 28 0.0 0.0 0.0 25.986249833073156 0.0 29 0.0 0.0 0.0 26.46930157809183 0.0 30 0.0 0.0 0.0 26.97537771515143 0.0 31 0.0 0.0 0.0 27.485137754937583 0.0 32 0.0 0.0 0.0 27.940099741666323 0.0 33 0.0 0.0 0.0 28.377563190443958 0.0 34 0.0 0.0 0.0 28.825617859560417 0.0 35 0.0 0.0 0.0 29.30866960457909 0.0 36 0.0 0.0 0.0 29.74198866278936 0.0 37 0.0 0.0 0.0 30.2291847983754 0.0 38 0.0 0.0 0.0 30.678620931014315 0.0 39 0.0 0.0 0.0 31.132201454220603 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACTCA 30 2.157345E-6 45.000004 29 TTGTGCG 35 1.2058445E-7 45.000004 1 GCGAAAG 30 2.157345E-6 45.000004 1 GACCGAT 35 1.2058445E-7 45.000004 9 GCCGGGA 30 2.157345E-6 45.000004 4 ATATGCG 30 2.157345E-6 45.000004 1 TCTACTC 30 2.157345E-6 45.000004 28 CGAGGGA 75 0.0 45.000004 4 GCGATTC 35 1.2058445E-7 45.000004 9 GCGATAT 30 2.157345E-6 45.000004 9 CGTAAGG 30 2.157345E-6 45.000004 2 CGTTTGT 30 2.157345E-6 45.000004 39 CGATATG 30 2.157345E-6 45.000004 10 TCACGGA 20 7.02064E-4 45.0 39 ACAACTT 20 7.02064E-4 45.0 26 ACAACGA 40 6.7702786E-9 45.0 13 CGGGTTC 20 7.02064E-4 45.0 6 CGGGTTA 45 3.8198777E-10 45.0 6 AACCGGA 20 7.02064E-4 45.0 30 AGGTAAG 25 3.8803257E-5 45.0 29 >>END_MODULE