##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551296_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 483362 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50352530815414 31.0 31.0 34.0 30.0 34.0 2 31.672835266322135 31.0 31.0 34.0 30.0 34.0 3 31.65817337730314 31.0 31.0 34.0 30.0 34.0 4 35.4419027561124 37.0 35.0 37.0 33.0 37.0 5 34.21532722886781 37.0 35.0 37.0 32.0 37.0 6 34.66350685407624 37.0 35.0 37.0 32.0 37.0 7 35.30211932257811 37.0 35.0 37.0 32.0 37.0 8 34.68274088571299 36.0 35.0 37.0 32.0 37.0 9 36.351080556601474 39.0 35.0 39.0 32.0 39.0 10 36.32159747766684 37.0 35.0 39.0 32.0 39.0 11 36.62601321576789 39.0 35.0 39.0 32.0 39.0 12 36.638840041211346 39.0 35.0 39.0 32.0 39.0 13 36.592185566925 39.0 35.0 39.0 32.0 39.0 14 37.68227746492277 40.0 37.0 41.0 32.0 41.0 15 37.648445678394246 40.0 36.0 41.0 32.0 41.0 16 37.94270753596683 40.0 37.0 41.0 33.0 41.0 17 37.578065714723124 40.0 36.0 41.0 32.0 41.0 18 37.5008151240685 39.0 36.0 40.0 32.0 41.0 19 37.39774330625908 39.0 36.0 40.0 32.0 41.0 20 36.89603444209516 39.0 35.0 41.0 31.0 41.0 21 37.10629300606998 39.0 35.0 40.0 32.0 41.0 22 37.06365829337019 39.0 35.0 41.0 32.0 41.0 23 36.88834248451471 39.0 35.0 41.0 31.0 41.0 24 36.94950575345187 39.0 35.0 41.0 31.0 41.0 25 36.98766762798896 39.0 35.0 40.0 32.0 41.0 26 36.847292505410024 39.0 35.0 41.0 31.0 41.0 27 36.63270592226944 39.0 35.0 41.0 30.0 41.0 28 36.454421323976646 39.0 35.0 41.0 30.0 41.0 29 36.57972492665952 39.0 35.0 41.0 30.0 41.0 30 36.24388139737919 39.0 35.0 41.0 30.0 41.0 31 36.28783396295116 39.0 35.0 40.0 30.0 41.0 32 35.69411952118702 39.0 35.0 41.0 25.0 41.0 33 35.28969178379765 39.0 35.0 41.0 23.0 41.0 34 34.89722609555571 39.0 35.0 41.0 21.0 41.0 35 34.672884918549656 39.0 35.0 41.0 18.0 41.0 36 34.64199295765906 39.0 35.0 41.0 18.0 41.0 37 34.594881269110935 39.0 35.0 41.0 18.0 41.0 38 34.6387862512982 39.0 34.0 40.0 20.0 41.0 39 34.17570682014722 39.0 34.0 40.0 14.0 41.0 40 34.13338864039788 38.0 33.0 40.0 15.0 41.0 41 34.0830723143317 38.0 33.0 40.0 18.0 41.0 42 33.982375528072126 38.0 34.0 40.0 13.0 41.0 43 34.0241454644759 38.0 34.0 40.0 13.0 41.0 44 34.34443336464182 39.0 34.0 41.0 15.0 41.0 45 34.32339530207174 39.0 34.0 40.0 17.0 41.0 46 34.26163827524712 38.0 34.0 40.0 16.0 41.0 47 34.00622307918289 38.0 33.0 40.0 16.0 41.0 48 33.9851374332281 38.0 34.0 40.0 15.0 41.0 49 34.01709277932481 38.0 34.0 40.0 15.0 41.0 50 33.895386894294546 38.0 34.0 40.0 14.0 41.0 51 33.040472771959735 37.0 32.0 40.0 12.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 9.0 10 24.0 11 15.0 12 10.0 13 22.0 14 31.0 15 34.0 16 50.0 17 112.0 18 220.0 19 542.0 20 1398.0 21 3273.0 22 5551.0 23 7102.0 24 8295.0 25 9822.0 26 10680.0 27 10446.0 28 9457.0 29 8535.0 30 9200.0 31 10993.0 32 13931.0 33 17844.0 34 27611.0 35 33396.0 36 36398.0 37 51510.0 38 88264.0 39 118549.0 40 28.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 51.66810796049338 15.515079795267313 16.732180022426256 16.08463222181305 2 32.0637534601396 38.41489401318267 16.78845254695239 12.73289997972534 3 24.028988625502212 37.92623334064324 26.36884984752628 11.675928186328258 4 22.457288740116105 18.094719899371487 45.22531767081401 14.222673689698404 5 35.0557139369665 23.891410578407076 25.024308903058163 16.028566581568267 6 20.030743004208027 41.82124370554574 26.98329616312412 11.164717127122117 7 57.83760411451458 5.15245302692392 32.77977995787836 4.230162900683132 8 55.76338230973887 20.854556212528085 17.635023026220516 5.747038451512531 9 51.24585714226605 6.723118490903299 18.007414732643444 24.023609634187213 10 40.82261327948825 19.5658740240234 25.48586773474125 14.125644961747097 11 33.683450498798 19.74917349729602 29.520318105271 17.047057898634975 12 22.15772030072699 17.526822547076517 33.19727243763474 27.118184714561757 13 27.119839788812527 19.311406357967734 39.168159681563715 14.400594171656026 14 17.617644746587445 33.17120501818513 30.04311468423252 19.168035550994905 15 14.511691030738866 21.820912690695586 40.951295302485505 22.71610097608004 16 16.043876018387877 23.369855305133626 30.478192327903308 30.108076348575185 17 16.782866671356047 29.650862086800366 34.564984421613616 19.001286820229975 18 16.68190714205916 23.068631791493747 33.54938948448575 26.700071581961343 19 17.113674637228414 24.486409771558375 31.165461910534965 27.23445368067825 20 24.435930006909935 23.354338984032672 37.36805954957154 14.84167145948585 21 19.010803497171892 33.289749711396425 31.769977780628185 15.929469010803496 22 16.67776945643224 20.377481059744042 40.23878583752963 22.70596364629408 23 22.693757473694664 26.35643679064552 33.883093830296964 17.066711905362855 24 19.786412667938315 27.268796471381695 30.468054998117356 22.476735862562634 25 15.228958834165699 36.47804337122074 29.649413896830946 18.643583897782616 26 16.034979994289994 21.964076613387068 39.69343887190139 22.30750452042155 27 24.97279471700299 24.08712310856046 30.195381515303232 20.74470065913332 28 14.71650646927148 28.27777111150649 36.2641250243089 20.741597394913132 29 19.712554979497767 19.735312250445837 39.18243469697659 21.369698073079803 30 15.977466164075786 31.705843653410902 31.493373496468486 20.823316686044826 31 21.61857986353913 20.403341594912302 27.236108754929017 30.74196978661955 32 28.415969811445667 26.634696149055987 27.087772725203884 17.861561314294462 33 22.624865008006424 25.732680682387116 25.820606501959194 25.82184780764727 34 23.70314588238215 22.403912595528816 30.377439682887776 23.51550183920126 35 22.920088877487267 26.27409684666978 26.738138289729026 24.067675986113926 36 18.025827433683244 31.806182529863747 28.658851957745956 21.509138078707053 37 21.150607619134313 23.834724285318252 30.044562874201947 24.97010522134549 38 17.734534365547976 28.624922935605195 23.630529499629677 30.010013199217152 39 27.31286282330841 26.236650791746147 26.985365005937577 19.465121379007865 40 18.509729767751708 29.147926398848067 28.646645785146536 23.695698048253693 41 20.601743620723184 28.830565911263196 25.120096325321395 25.447594142692225 42 19.803377179008695 27.224523235173635 32.016790728274046 20.955308857543624 43 21.36307777607673 28.562443882638682 26.952470405203556 23.122007936081033 44 21.042614024271664 22.833197479321914 31.30883271750779 24.81535577889863 45 19.362506775460215 22.26571389558964 29.10427381548405 29.267505513466098 46 27.416304963981446 27.374514339149542 26.289199399208048 18.919981297660968 47 16.700526727380307 27.06398103284909 36.60031198149627 19.63518025827434 48 21.41024739222363 26.27802764801536 27.217075401045182 25.094649558715826 49 20.067775290568974 21.66595636396738 36.53204016865207 21.73422817681158 50 21.181019608492186 23.13628295149391 31.636123650597277 24.046573789416627 51 19.67924661020105 21.074681087880304 30.297375466006844 28.948696835911804 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 97.0 1 381.5 2 666.0 3 7286.5 4 13907.0 5 9174.0 6 4441.0 7 4151.0 8 3861.0 9 3792.5 10 3724.0 11 3570.0 12 3416.0 13 3291.5 14 3167.0 15 2881.0 16 2595.0 17 2461.5 18 2328.0 19 2293.5 20 2259.0 21 2233.5 22 2208.0 23 2352.0 24 2496.0 25 2541.5 26 3347.0 27 4107.0 28 5055.5 29 6004.0 30 6730.5 31 7457.0 32 7892.0 33 8327.0 34 9537.5 35 10748.0 36 11205.5 37 11663.0 38 12788.5 39 13914.0 40 16058.0 41 18202.0 42 19487.0 43 20772.0 44 24155.5 45 27539.0 46 57393.0 47 87247.0 48 65945.0 49 44643.0 50 44118.5 51 43594.0 52 38062.5 53 32531.0 54 29828.0 55 27125.0 56 23888.0 57 20651.0 58 17692.0 59 14733.0 60 13264.0 61 11795.0 62 10344.0 63 8893.0 64 7670.5 65 6448.0 66 4932.0 67 3416.0 68 2974.0 69 2532.0 70 1994.5 71 1457.0 72 1117.5 73 778.0 74 655.5 75 409.0 76 285.0 77 212.5 78 140.0 79 79.5 80 19.0 81 20.0 82 21.0 83 27.0 84 33.0 85 17.0 86 1.0 87 0.5 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 483362.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.98967615708959 #Duplication Level Percentage of deduplicated Percentage of total 1 77.17294816288293 24.687376198184868 2 8.974559826294582 5.741865249911798 3 3.164248844023518 3.036698874022723 4 1.5796313800680664 2.021275851838158 5 0.9858158696983134 1.5767965211084332 6 0.7304625006500188 1.4020355304415169 7 0.5945438115459594 1.331348479478986 8 0.5224935330648616 1.3371519133534804 9 0.443846304990051 1.2778649604137295 >10 5.65855894453793 36.33020648949535 >50 0.1069965843319819 2.334381849691564 >100 0.05349829216599095 3.070280857470952 >500 0.0052193455771698495 1.0842301036341238 >1k 0.004566927380023619 4.2757694192785936 >5k 6.524181971462312E-4 1.7940408028563866 >10k+ 0.0019572545914386934 8.698676898819373 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACGGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGC 14430 2.9853401798238175 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 14069 2.9106549542578852 No Hit GAATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTC 13180 2.7267348281412276 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8596 1.778377282450834 No Hit GCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 4483 0.9274622332744403 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTCCGAGAAT 3600 0.7447834128458588 No Hit GAATGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCT 3167 0.6552025190230096 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTA 2749 0.5687248894203517 No Hit GAACTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCT 2608 0.5395542057505555 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTC 2396 0.49569473810518827 No Hit GAATGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTT 1484 0.30701627351757066 No Hit GAATGATACGGCCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATG 791 0.16364546654474285 No Hit CTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGCT 770 0.15930089663647534 No Hit GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCTCCGAGAA 681 0.14088819559667495 No Hit CCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCGTCTTCTGC 654 0.13530232000033102 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGT 627 0.12971644440398708 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTAT 583 0.1206135360247599 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCC 553 0.11440700758437775 No Hit GAATAATACCTGTCTCTTATACACATCTGACGCTCCGAGAATCGTATGCCG 536 0.11088997480149454 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.0688428134607188E-4 0.0 0.0 0.16592119363954966 0.0 2 2.0688428134607188E-4 0.0 0.0 1.3975033204927156 0.0 3 2.0688428134607188E-4 0.0 0.0 1.6304550212883926 0.0 4 2.0688428134607188E-4 0.0 0.0 2.4716465092415207 0.0 5 2.0688428134607188E-4 0.0 0.0 6.123567843562382 0.0 6 2.0688428134607188E-4 0.0 0.0 6.903728468518419 0.0 7 2.0688428134607188E-4 0.0 0.0 8.082555103628337 0.0 8 2.0688428134607188E-4 0.0 0.0 9.269863994273443 0.0 9 2.0688428134607188E-4 0.0 0.0 9.56074329384602 0.0 10 2.0688428134607188E-4 0.0 0.0 13.264178814222053 0.0 11 2.0688428134607188E-4 0.0 0.0 14.236121167985898 0.0 12 2.0688428134607188E-4 0.0 0.0 18.235814979249508 0.0 13 2.0688428134607188E-4 0.0 0.0 18.714545206284317 0.0 14 2.0688428134607188E-4 0.0 0.0 18.988046226223823 0.0 15 2.0688428134607188E-4 0.0 0.0 19.852822522250406 0.0 16 2.0688428134607188E-4 0.0 0.0 20.499749670019572 0.0 17 2.0688428134607188E-4 0.0 0.0 21.144607974975276 0.0 18 2.0688428134607188E-4 0.0 0.0 21.76526081901349 0.0 19 2.0688428134607188E-4 0.0 0.0 23.01670383687588 0.0 20 2.0688428134607188E-4 0.0 0.0 23.59660047748892 0.0 21 2.0688428134607188E-4 0.0 0.0 24.0716067874595 0.0 22 2.0688428134607188E-4 0.0 0.0 24.647158858164275 0.0 23 2.0688428134607188E-4 0.0 0.0 25.10561442562717 0.0 24 2.0688428134607188E-4 0.0 0.0 25.50634927859451 0.0 25 2.0688428134607188E-4 0.0 0.0 25.87874098501744 0.0 26 2.0688428134607188E-4 0.0 0.0 26.278855185140742 0.0 27 2.0688428134607188E-4 0.0 0.0 26.749723809484404 0.0 28 2.0688428134607188E-4 0.0 0.0 27.07577343688581 0.0 29 2.0688428134607188E-4 0.0 0.0 27.42085641817106 0.0 30 2.0688428134607188E-4 0.0 0.0 27.784558984777455 0.0 31 2.0688428134607188E-4 0.0 0.0 28.159433302576538 0.0 32 2.0688428134607188E-4 0.0 0.0 28.51961883640005 0.0 33 2.0688428134607188E-4 0.0 0.0 28.876907990284714 0.0 34 2.0688428134607188E-4 0.0 0.0 29.227576847166308 0.0 35 2.0688428134607188E-4 0.0 0.0 29.576383745515784 0.0 36 2.0688428134607188E-4 0.0 0.0 29.92208737964507 0.0 37 2.0688428134607188E-4 0.0 0.0 30.254136651205513 0.0 38 2.0688428134607188E-4 0.0 0.0 30.585565269921922 0.0 39 2.0688428134607188E-4 0.0 0.0 30.946785225152162 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACCGAT 35 1.2099736E-7 45.000004 16 CGGCGAT 230 0.0 45.000004 31 CGAGCCC 35 1.2099736E-7 45.000004 34 ACCCGTC 35 1.2099736E-7 45.000004 39 CGATCAC 70 0.0 45.000004 34 TTGTGCG 25 3.88744E-5 45.0 1 GCGAACC 55 1.8189894E-12 45.0 33 GTTTACG 20 7.029225E-4 45.0 1 TAGCGTG 25 3.88744E-5 45.0 1 GTTAGCG 20 7.029225E-4 45.0 1 ACGGGTC 25 3.88744E-5 45.0 5 ATCGTAA 25 3.88744E-5 45.0 41 CTACGTG 20 7.029225E-4 45.0 14 CGGGCAA 20 7.029225E-4 45.0 6 ACTCGTA 20 7.029225E-4 45.0 40 TACTAGG 25 3.88744E-5 45.0 2 TAGTGCG 40 6.8012014E-9 45.0 1 GTGACGC 20 7.029225E-4 45.0 9 CAATCGA 170 0.0 45.0 41 CGATCGA 130 0.0 44.999996 41 >>END_MODULE