##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551294_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 742766 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.459925467778547 31.0 31.0 34.0 30.0 34.0 2 31.63011365625244 31.0 31.0 34.0 30.0 34.0 3 31.60898317909005 31.0 31.0 34.0 30.0 34.0 4 35.41090599192747 37.0 35.0 37.0 33.0 37.0 5 34.19997145803658 37.0 35.0 37.0 32.0 37.0 6 34.634591513343366 37.0 35.0 37.0 32.0 37.0 7 35.31595145712109 37.0 35.0 37.0 32.0 37.0 8 34.80373899720774 37.0 35.0 37.0 32.0 37.0 9 36.53305617112253 39.0 35.0 39.0 32.0 39.0 10 36.32915884679697 38.0 35.0 39.0 32.0 39.0 11 36.60248449713638 39.0 35.0 39.0 32.0 39.0 12 36.634170115487244 39.0 35.0 39.0 32.0 39.0 13 36.63055255625594 39.0 35.0 39.0 32.0 39.0 14 37.72042473672732 40.0 37.0 41.0 32.0 41.0 15 37.69877861937676 40.0 36.0 41.0 32.0 41.0 16 37.92925901293274 40.0 37.0 41.0 33.0 41.0 17 37.62115928838961 40.0 36.0 41.0 32.0 41.0 18 37.51905041426237 39.0 36.0 40.0 32.0 41.0 19 37.38447371042832 39.0 36.0 40.0 32.0 41.0 20 36.96044245428574 39.0 35.0 41.0 31.0 41.0 21 37.17232614309217 39.0 35.0 40.0 32.0 41.0 22 37.21198600905265 39.0 35.0 41.0 32.0 41.0 23 37.036842020232484 39.0 35.0 41.0 31.0 41.0 24 37.003402148186645 39.0 35.0 41.0 31.0 41.0 25 37.00564511568919 39.0 35.0 40.0 32.0 41.0 26 36.931278491476455 39.0 35.0 41.0 31.0 41.0 27 36.78763702161919 39.0 35.0 41.0 31.0 41.0 28 36.64512376710835 39.0 35.0 41.0 30.0 41.0 29 36.70413966175081 39.0 35.0 41.0 31.0 41.0 30 36.43208628289394 39.0 35.0 41.0 30.0 41.0 31 36.34122051897906 39.0 35.0 40.0 30.0 41.0 32 35.83924950792039 39.0 35.0 41.0 26.0 41.0 33 35.5252932956005 39.0 35.0 41.0 24.0 41.0 34 35.27672914484508 39.0 35.0 41.0 23.0 41.0 35 35.06530185818952 39.0 35.0 41.0 20.0 41.0 36 34.95209662262408 39.0 35.0 41.0 20.0 41.0 37 34.72803951715614 39.0 35.0 41.0 18.0 41.0 38 34.923415988346264 39.0 35.0 41.0 20.0 41.0 39 34.76963000460441 39.0 35.0 40.0 20.0 41.0 40 34.79775191648514 39.0 34.0 40.0 21.0 41.0 41 34.404463855373024 38.0 34.0 40.0 18.0 41.0 42 34.46271638712596 39.0 35.0 40.0 18.0 41.0 43 34.485308966754 39.0 35.0 40.0 18.0 41.0 44 34.724903940137274 39.0 35.0 41.0 18.0 41.0 45 34.68076217812878 39.0 35.0 41.0 18.0 41.0 46 34.61668412393674 39.0 35.0 40.0 19.0 41.0 47 34.29130708729263 38.0 34.0 40.0 18.0 41.0 48 34.41140009101117 38.0 34.0 40.0 18.0 41.0 49 34.4809711268421 38.0 34.0 40.0 18.0 41.0 50 34.30764870766836 38.0 34.0 40.0 17.0 41.0 51 33.539945285594655 37.0 33.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 9.0 9 18.0 10 21.0 11 29.0 12 28.0 13 23.0 14 38.0 15 59.0 16 83.0 17 167.0 18 333.0 19 785.0 20 1744.0 21 3567.0 22 6034.0 23 9169.0 24 11812.0 25 13803.0 26 15798.0 27 16274.0 28 14030.0 29 13047.0 30 13524.0 31 16269.0 32 20649.0 33 27531.0 34 43431.0 35 54381.0 36 58631.0 37 81522.0 38 137766.0 39 182144.0 40 46.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.58824986604125 16.422803413188003 18.30940026872528 16.679546452045464 2 33.13048793294254 35.9934353484139 17.888271676409527 12.987805042234028 3 23.920184822676323 35.08722800989813 28.349843692360714 12.642743475064824 4 22.299216711588844 18.971385335354608 43.989493326296575 14.739904626759975 5 31.657480283157817 24.474868262682996 27.014295215451433 16.853356238707747 6 19.62111889881874 39.320997460842314 29.133401367321603 11.924482273017343 7 60.17197879278265 5.19113691256735 30.385343432521143 4.251540862128853 8 58.42418742914997 17.32241378846097 18.30886174111362 5.944537041275448 9 54.03828392791269 6.724594286760569 18.63534410568066 20.60177767964608 10 39.315073657114084 19.22758984660041 27.10799901987975 14.34933747640576 11 31.263547335230747 20.13204697037829 30.57409736040691 18.030308333984056 12 21.766747535563017 16.577226205830637 35.20085733595776 26.455168922648586 13 25.22665280855613 19.818758532296847 39.48605617381517 15.468532485331854 14 18.15336189324767 30.139774841605565 32.01385093017181 19.693012334974945 15 15.01549613202543 21.806733210728545 41.573793092306325 21.603977564939697 16 16.577764733442297 23.24567898907597 31.810018229159652 28.36653804832208 17 16.79182945907594 28.36424930597254 34.715913221660664 20.12800801329086 18 16.671333905967696 22.917850305479785 34.77932484793327 25.63149094061925 19 16.91784492020367 24.927500720280683 31.891739794228602 26.262914565287048 20 22.677801622583694 24.40351335413845 37.37839373369271 15.540291289585145 21 18.886028708906977 31.985847494365654 32.88343839109491 16.24468540563246 22 16.714820010608992 20.598142618267396 38.84884337732206 23.83819399380155 23 20.924355719028604 26.393911406822607 34.064429443458636 18.61730343069015 24 19.62084963501291 26.175538460295705 31.72856592789654 22.475045976794846 25 16.188409270214308 34.069680087672296 29.587649407754256 20.15426123435914 26 16.412032860954863 21.830159161835624 37.798310638882235 23.959497338327278 27 23.55896742715741 23.850176233160912 31.25102656825972 21.339829771421957 28 14.656971374564803 26.979829448305388 35.39418874854261 22.9690104285872 29 18.41414388919256 20.93781890932003 35.20179975927816 25.446237442209256 30 16.10412969898999 28.35092074758403 35.312601815376574 20.2323477380494 31 18.59118484152479 23.294146474125093 27.666452153168024 30.448216531182094 32 24.003118074871495 28.36748047164248 27.688935680954703 19.940465772531322 33 20.213768535447233 23.839944208539432 27.25057420506593 28.695713050947404 34 19.266767730348455 25.92916207796264 27.11338429599632 27.690685895692585 35 23.027575306354894 24.166561205009383 29.42191753526683 23.383945953368894 36 17.16906805104165 30.136005148323967 26.214312448335008 26.48061435229938 37 17.191013051216668 27.355721721241956 34.09579867683766 21.357466550703723 38 17.896618854390212 25.172261519778772 24.83285449253197 32.098265133299044 39 19.20981843541573 32.70155069025776 26.821636962381152 21.26699391194535 40 20.43012200343042 22.53078358460134 30.153372663799903 26.885721748168333 41 17.16879878723582 31.40423767377613 26.02057714004141 25.40638639894664 42 22.405441282988182 23.74462482127615 31.856062339956324 21.993871555779343 43 20.41652418123608 27.109479970811805 26.816386318167496 25.657609529784615 44 19.30150276130033 22.9283515939071 32.095707127143676 25.674438517648895 45 18.95684508983987 21.527102748375665 29.052218329864317 30.463833831920144 46 25.15018188770084 27.051857516364507 26.916552453935694 20.88140814199896 47 16.00450209083345 25.08690489333114 36.80284234873433 22.10575066710108 48 19.065627667394576 26.369004504783472 28.758316885802525 25.807050942019426 49 19.780388439966288 21.58459057092005 36.43139292859393 22.203628060519733 50 20.292932094360808 21.947827444982675 32.020717157220446 25.73852330343607 51 18.498692724222703 21.107185843186144 29.692931555833198 30.701189876757955 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 249.0 1 683.0 2 1117.0 3 12829.0 4 24541.0 5 15656.5 6 6772.0 7 6353.5 8 5935.0 9 5864.5 10 5794.0 11 5725.0 12 5656.0 13 5463.0 14 5270.0 15 4966.0 16 4662.0 17 4506.5 18 4351.0 19 4107.0 20 3863.0 21 3804.5 22 3746.0 23 3710.0 24 3674.0 25 4061.5 26 5312.5 27 6176.0 28 6901.5 29 7627.0 30 8457.5 31 9288.0 32 10504.0 33 11720.0 34 13290.0 35 14860.0 36 16344.0 37 17828.0 38 19676.0 39 21524.0 40 23183.0 41 24842.0 42 27641.0 43 30440.0 44 36478.5 45 42517.0 46 86635.5 47 130754.0 48 101635.0 49 72516.0 50 70857.0 51 69198.0 52 59372.0 53 49546.0 54 43855.5 55 38165.0 56 34142.5 57 30120.0 58 27057.0 59 23994.0 60 21799.0 61 19604.0 62 17106.0 63 14608.0 64 12103.5 65 9599.0 66 8021.5 67 6444.0 68 5109.5 69 3775.0 70 3544.0 71 3313.0 72 2591.0 73 1869.0 74 1528.5 75 911.5 76 635.0 77 472.0 78 309.0 79 212.5 80 116.0 81 95.5 82 75.0 83 52.5 84 30.0 85 18.0 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 742766.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.06666006829472 #Duplication Level Percentage of deduplicated Percentage of total 1 76.68233784645705 25.356287988109262 2 9.486939994647 6.274028397826043 3 3.3857118589062543 3.3586254938294196 4 1.7450154129431321 2.30807325894902 5 1.0687889221226419 1.7670639986294256 6 0.8317455791024086 1.650182899649177 7 0.6539136843964829 1.513591906116126 8 0.5457737490213593 1.4437532026470472 9 0.44777173018980454 1.3325684031340603 >10 4.963049353239524 33.277751360509875 >50 0.12666004406598763 2.709026076060086 >100 0.05024873875940833 3.1734383912882387 >500 0.0066444613235581255 1.5565090508547028 >1k 0.00290695182905668 2.703258683292958 >5k 8.305576654447657E-4 1.597292746320415 >10k+ 0.0016611153308895314 9.978548142784181 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTC 19759 2.6601917696825113 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGC 18784 2.5289256643411253 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCG 18226 2.453801062514978 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15898 2.140377992530622 No Hit GCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 6409 0.8628558657773782 Illumina Single End Adapter 2 (95% over 21bp) GAACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCT 5223 0.7031824289210868 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCCTCACAGAT 4687 0.631019728959053 No Hit GAATGACTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCT 3961 0.5332769674433132 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCCTCACAGATCGTA 3700 0.498138040782696 No Hit GAATGATCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTC 3475 0.4678458626269915 No Hit GAATGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTT 1351 0.18188770083714118 No Hit CTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGCT 1312 0.17663705662348572 Illumina Single End Adapter 2 (95% over 22bp) GAATGATACGGCCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATG 1200 0.1615582834970906 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCC 929 0.12507303780733098 No Hit GAATGATACGGCGACCTGTCTCTTATACACATCTGACGCCTCACAGATCGT 878 0.11820681075870464 No Hit CCTGTCTCTTATACACATCTGACGCCTCACAGATCGTATGCCGTCTTCTGC 862 0.11605270031207675 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCCTGTCTCTTATACACATCTGACGCCTCACAGA 780 0.1050128842731089 No Hit GAATGATACGGCGCTGTCTCTTATACACATCTGACGCCTCACAGATCGTAT 762 0.10258951002065253 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.3463190291424217E-4 0.0 0.0 0.18377254747794056 0.0 2 1.3463190291424217E-4 0.0 0.0 1.378765317744754 0.0 3 1.3463190291424217E-4 0.0 0.0 1.681148571690142 0.0 4 1.3463190291424217E-4 0.0 0.0 2.7777254209266444 0.0 5 1.3463190291424217E-4 0.0 0.0 6.46125428466031 0.0 6 1.3463190291424217E-4 0.0 0.0 7.297856929369411 0.0 7 1.3463190291424217E-4 0.0 0.0 8.489887797772111 0.0 8 1.3463190291424217E-4 0.0 0.0 9.902176459342511 0.0 9 1.3463190291424217E-4 0.0 0.0 10.292743609696728 0.0 10 1.3463190291424217E-4 0.0 0.0 13.708220354728137 0.0 11 1.3463190291424217E-4 0.0 0.0 14.964336008918018 0.0 12 1.3463190291424217E-4 0.0 0.0 18.730394229138113 0.0 13 1.3463190291424217E-4 0.0 0.0 19.336910951766775 0.0 14 1.3463190291424217E-4 0.0 0.0 19.624888592100337 0.0 15 1.3463190291424217E-4 0.0 0.0 20.478185592770807 0.0 16 1.3463190291424217E-4 0.0 0.0 21.189176672060917 0.0 17 1.3463190291424217E-4 0.0 0.0 21.95859799721581 0.0 18 1.3463190291424217E-4 0.0 0.0 22.76679331041001 0.0 19 1.3463190291424217E-4 0.0 0.0 24.007157031958922 0.0 20 1.3463190291424217E-4 0.0 0.0 24.614616177907983 0.0 21 1.3463190291424217E-4 0.0 0.0 25.21063161210933 0.0 22 1.3463190291424217E-4 0.0 0.0 25.9315854522151 0.0 23 1.3463190291424217E-4 0.0 0.0 26.541064076707872 0.0 24 1.3463190291424217E-4 0.0 0.0 27.03866358987891 0.0 25 1.3463190291424217E-4 0.0 0.0 27.47662117005894 0.0 26 1.3463190291424217E-4 0.0 0.0 27.905558412743716 0.0 27 1.3463190291424217E-4 0.0 0.0 28.41271679102167 0.0 28 1.3463190291424217E-4 0.0 0.0 28.836672653298617 0.0 29 1.3463190291424217E-4 0.0 0.0 29.26493673646882 0.0 30 1.3463190291424217E-4 0.0 0.0 29.746245789387235 0.0 31 2.6926380582848434E-4 0.0 0.0 30.18339557814978 0.0 32 2.6926380582848434E-4 0.0 0.0 30.601158372892673 0.0 33 2.6926380582848434E-4 0.0 0.0 31.032115094121163 0.0 34 2.6926380582848434E-4 0.0 0.0 31.453512950242743 0.0 35 2.6926380582848434E-4 0.0 0.0 31.901029395529683 0.0 36 2.6926380582848434E-4 0.0 0.0 32.32215798784543 0.0 37 2.6926380582848434E-4 0.0 0.0 32.723361058529875 0.0 38 2.6926380582848434E-4 0.0 0.0 33.14193164469025 0.0 39 2.6926380582848434E-4 0.0 0.0 33.55511695473406 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTTGCG 20 7.031672E-4 45.000004 1 GATAACG 20 7.031672E-4 45.000004 1 CTATCGC 20 7.031672E-4 45.000004 25 ACACCGT 35 1.2111559E-7 45.000004 39 CAACCGG 20 7.031672E-4 45.000004 45 TGTTGCG 35 1.2111559E-7 45.000004 1 TCGTGTA 20 7.031672E-4 45.000004 17 CATCGTA 55 1.8189894E-12 45.000004 40 CATCGCT 20 7.031672E-4 45.000004 13 ACATCGC 20 7.031672E-4 45.000004 24 ATCGCTA 20 7.031672E-4 45.000004 14 ATTTACG 25 3.889468E-5 45.0 1 CGGGTTC 45 3.8380676E-10 45.0 6 ATTAGCG 25 3.889468E-5 45.0 1 TCGTGTC 25 3.889468E-5 45.0 32 TATAGCG 25 3.889468E-5 45.0 1 ACGTATT 25 3.889468E-5 45.0 35 CGATCGA 385 0.0 45.0 41 TCGAATA 25 3.889468E-5 45.0 44 CGTTTTT 6765 0.0 43.43681 1 >>END_MODULE