##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551282_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 195805 Sequences flagged as poor quality 0 Sequence length 51 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.53854600240035 31.0 31.0 34.0 30.0 34.0 2 31.71318914225888 31.0 31.0 34.0 30.0 34.0 3 31.68056484768009 33.0 31.0 34.0 30.0 34.0 4 35.37362171548224 37.0 35.0 37.0 33.0 37.0 5 34.31273460841143 37.0 35.0 37.0 32.0 37.0 6 34.75389290365415 37.0 35.0 37.0 32.0 37.0 7 35.37976047598376 37.0 35.0 37.0 32.0 37.0 8 35.061229284236866 37.0 35.0 37.0 32.0 37.0 9 36.91889890452236 39.0 37.0 39.0 32.0 39.0 10 36.66313934782053 39.0 35.0 39.0 32.0 39.0 11 36.81687393069635 39.0 37.0 39.0 33.0 39.0 12 36.77292714690636 39.0 35.0 39.0 33.0 39.0 13 36.8043257322336 39.0 37.0 39.0 33.0 39.0 14 37.84038711983862 40.0 37.0 41.0 33.0 41.0 15 37.98648655550165 40.0 37.0 41.0 33.0 41.0 16 38.060790071755065 40.0 37.0 41.0 33.0 41.0 17 37.918449477796784 40.0 37.0 41.0 33.0 41.0 18 37.77480656775874 39.0 37.0 41.0 33.0 41.0 19 37.645795561911086 39.0 37.0 41.0 33.0 41.0 20 37.570465514159494 39.0 35.0 41.0 33.0 41.0 21 37.452976175276426 39.0 35.0 41.0 33.0 41.0 22 37.53590051326575 39.0 35.0 41.0 33.0 41.0 23 37.591077858073085 39.0 35.0 41.0 33.0 41.0 24 37.525962054084424 39.0 35.0 41.0 33.0 41.0 25 37.17211511452721 39.0 35.0 41.0 33.0 41.0 26 37.293250938433644 39.0 35.0 41.0 33.0 41.0 27 37.2764842572968 39.0 35.0 41.0 33.0 41.0 28 37.07749036030745 39.0 35.0 41.0 33.0 41.0 29 37.032951150379205 39.0 35.0 41.0 32.0 41.0 30 36.746155614003726 39.0 35.0 41.0 31.0 41.0 31 36.60367202063277 39.0 35.0 41.0 31.0 41.0 32 36.47678557748781 39.0 35.0 41.0 31.0 41.0 33 36.266458977043484 39.0 35.0 41.0 30.0 41.0 34 35.99137917826409 39.0 35.0 41.0 29.0 41.0 35 35.86924746559077 39.0 35.0 41.0 27.0 41.0 36 35.6690176451061 39.0 35.0 41.0 26.0 41.0 37 35.59118510763259 39.0 35.0 41.0 25.0 41.0 38 35.43057633870432 39.0 35.0 41.0 25.0 41.0 39 35.34633436326958 39.0 35.0 41.0 24.0 41.0 40 35.27774571640152 39.0 35.0 40.0 24.0 41.0 41 35.13093128367508 38.0 35.0 40.0 23.0 41.0 42 35.23011669773499 39.0 35.0 40.0 23.0 41.0 43 35.14007813896479 38.0 35.0 40.0 23.0 41.0 44 35.226873675340265 39.0 35.0 41.0 23.0 41.0 45 35.2662087280713 39.0 35.0 41.0 24.0 41.0 46 35.206200045964096 38.0 35.0 40.0 23.0 41.0 47 35.14221291591124 38.0 35.0 40.0 23.0 41.0 48 35.104588749010496 38.0 35.0 40.0 23.0 41.0 49 35.072000204284876 38.0 35.0 40.0 24.0 41.0 50 34.943341589847044 38.0 35.0 40.0 23.0 41.0 51 34.112014504226146 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 1.0 9 15.0 10 14.0 11 16.0 12 25.0 13 13.0 14 14.0 15 22.0 16 36.0 17 63.0 18 94.0 19 187.0 20 387.0 21 627.0 22 896.0 23 1177.0 24 1862.0 25 2418.0 26 3322.0 27 3695.0 28 3564.0 29 3348.0 30 3516.0 31 4225.0 32 5023.0 33 7126.0 34 12661.0 35 15831.0 36 15780.0 37 22393.0 38 37517.0 39 49924.0 40 11.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.40190495646179 20.874849978294733 18.6772554327009 19.045989632542582 2 37.41324276703863 26.7745971757616 19.808482929445113 16.003677127754653 3 29.063098490845483 25.424274150302594 30.468578432624295 15.044048926227624 4 25.64336967901739 22.22313015500115 34.753964403360484 17.379535762620975 5 26.260310002298205 29.081994841806903 27.507979877939785 17.149715277955107 6 23.27979367227599 34.10229565128572 28.948698960700696 13.669211715737594 7 67.43801230816374 6.454891345981972 20.907024846147955 5.200071499706341 8 66.84865044304283 9.936416332575778 17.012333699343735 6.202599525037665 9 60.80539312070683 9.069227037103241 18.97551135057838 11.149868491611551 10 37.22274712086004 23.576006741400885 25.398738540895277 13.8025075968438 11 28.500293659508184 23.154669186180126 30.523735348944104 17.821301805367582 12 24.92173335716657 19.45098439774265 34.736600188963514 20.890682056127268 13 24.03513699854447 23.40645029493629 35.089502310972655 17.468910395546587 14 17.03225147468144 29.254104849212226 33.06912489466561 20.64451878144072 15 16.676285079543423 23.416664538699216 40.23186333341845 19.67518704833891 16 17.923954955185007 25.428870559995914 35.161002017313145 21.486172467505938 17 18.166032532366387 25.623451903679683 32.91335767728097 23.297157886672963 18 19.83401853885243 24.0024514185031 34.36020530629963 21.803324736344834 19 20.953499655269272 24.87270498710452 31.95628303669467 22.21751232093154 20 22.52445034600751 24.523888562600547 34.4567299098593 18.49493118153265 21 21.269630499731875 25.87114731493067 34.15285615791221 18.706366027425243 22 18.540384566277673 23.476928576900487 34.31270907280202 23.669977784019817 23 19.053650315364777 24.988125941625597 33.92405709762264 22.034166645386993 24 19.95352519087868 23.78897372385792 33.36023084190904 22.89727024335436 25 18.080743596945943 28.754117617016927 31.69173412323485 21.473404662802277 26 17.641020402951916 27.03097469421108 32.7749546742933 22.553050228543704 27 20.45913025714359 26.879803886519753 31.760169556446467 20.9008962998902 28 16.627256709481372 27.80623579581727 34.76111437399453 20.805393120706825 29 17.73499144557085 26.21281376880059 35.42401879420852 20.628175991420036 30 19.201756849927225 28.283240979545976 32.366895635964354 20.148106534562444 31 20.433083935548122 28.502847220448917 28.844002962130695 22.22006588187227 32 21.755317790659074 28.362912080896812 30.872551773448077 19.00921835499604 33 23.336993437348383 27.053956742677666 28.682617910676438 20.926431909297516 34 20.785475345369118 26.766425780751256 29.388932866882868 23.059166006996755 35 22.713413855621663 26.834350501774722 28.792931743316053 21.659303899287558 36 23.50859273256556 30.025280253313248 26.91402160312556 19.552105410995633 37 20.712443502464186 29.33786164806823 30.550803094915864 19.398891754551723 38 21.527540154745793 28.45126528944613 27.491637087919102 22.52955746788897 39 23.552003268558007 24.861980031153443 29.94203416664539 21.643982533643165 40 24.163836469957356 24.087740353923547 29.935394908199488 21.813028267919616 41 20.730829141237457 26.282781338576644 28.13973085467685 24.846658665509054 42 22.74507801128674 25.63519828400705 29.579428513061462 22.04029519164475 43 24.127065192410818 25.271571206046833 28.724496310104442 21.87686729143791 44 20.756875462832923 25.94673271877633 29.47166824136258 23.824723577028166 45 20.548504890069204 25.06320063328311 29.351650877148185 25.036643599499502 46 23.432496616531754 26.999310538546002 28.94818824851255 20.620004596409693 47 20.766068282219553 25.465641837542453 32.86994714128853 20.898342738949466 48 21.22417711498685 24.081101095477646 31.581420290595236 23.113301498940274 49 22.0893235617068 22.384004494267256 34.106892060979035 21.419779883046907 50 20.653711600827354 22.582160823268048 32.80661882995838 23.95750874594622 51 20.582211894486864 22.829856234519035 29.97931615638007 26.608615714614032 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 147.0 1 246.0 2 345.0 3 3415.0 4 6485.0 5 4175.5 6 1866.0 7 1773.0 8 1680.0 9 1573.5 10 1467.0 11 1439.0 12 1411.0 13 1397.0 14 1383.0 15 1214.0 16 1045.0 17 991.5 18 938.0 19 937.5 20 937.0 21 940.0 22 943.0 23 933.5 24 924.0 25 1108.5 26 1634.5 27 1976.0 28 2140.5 29 2305.0 30 2661.5 31 3018.0 32 3345.0 33 3672.0 34 3977.0 35 4282.0 36 4624.0 37 4966.0 38 5474.5 39 5983.0 40 7060.5 41 8138.0 42 9237.5 43 10337.0 44 12002.5 45 13668.0 46 17931.5 47 22195.0 48 20757.5 49 19320.0 50 18503.5 51 17687.0 52 15222.5 53 12758.0 54 10762.5 55 8767.0 56 8191.5 57 7616.0 58 7134.0 59 6652.0 60 6489.5 61 6327.0 62 5690.5 63 5054.0 64 4366.5 65 3679.0 66 3104.0 67 2529.0 68 1979.0 69 1429.0 70 1137.0 71 845.0 72 866.0 73 887.0 74 673.0 75 345.0 76 231.0 77 160.0 78 89.0 79 56.5 80 24.0 81 22.5 82 21.0 83 21.5 84 22.0 85 11.5 86 1.0 87 1.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 195805.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.923418707387455 #Duplication Level Percentage of deduplicated Percentage of total 1 78.88314482903404 30.70401675135977 2 8.068071482929644 6.28073848982406 3 2.674049387251686 3.1224943183269067 4 1.4472406644448526 2.253262174101785 5 0.9538929855407142 1.8564388039120554 6 0.7623271314981499 1.780342687878246 7 0.6586716351326528 1.7946426291463444 8 0.5484556643136432 1.7078215571614617 9 0.4828509197785184 1.6914787671407776 >10 5.407143044584985 38.67878756926534 >50 0.06822893431652977 1.8099639947907358 >100 0.03805075183037237 3.143433518040908 >500 0.0026241897814049914 0.7558540384566278 >1k 0.005248379562809983 4.420724700594979 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4239 2.164908965552463 No Hit GAATCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTC 1691 0.8636143101555119 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCG 1402 0.7160184877812109 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGC 1324 0.676182937105794 No Hit GCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 908 0.46372666683690406 No Hit GAATGCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTT 572 0.29212737161972374 No Hit CCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 495 0.2528025331324532 No Hit CTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGCT 397 0.20275273869410892 Illumina Single End Adapter 2 (95% over 21bp) GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAAATGCGGT 383 0.19560276806005975 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCC 374 0.19100635836674243 No Hit GAATGACTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCT 331 0.1690457342764485 No Hit GAACTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCT 330 0.16853502208830215 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 312 0.1593422027016675 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 305 0.1557672173846429 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTC 234 0.1195066520262506 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 223 0.11388881795664053 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAAATGCGGTCGTA 221 0.11286739358034778 No Hit TCTGTCTCTTATACACATCTGACGCAAATGCGGTCGTATGCCGTCTTCTGC 201 0.1026531498174204 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2206276652792319 0.0 2 0.0 0.0 0.0 1.2160057199765073 0.0 3 0.0 0.0 0.0 1.5719721151145272 0.0 4 0.0 0.0 0.0 2.190955287147928 0.0 5 0.0 0.0 0.0 4.246061132248921 0.0 6 0.0 0.0 0.0 5.2286713822425375 0.0 7 0.0 0.0 0.0 6.041214473583412 0.0 8 0.0 0.0 0.0 7.088685171471617 0.0 9 0.0 0.0 0.0 7.519726258267154 0.0 10 0.0 0.0 0.0 9.138173182503001 0.0 11 0.0 0.0 0.0 10.573274431194301 0.0 12 0.0 0.0 0.0 12.486913000178749 0.0 13 0.0 0.0 0.0 13.260131253032354 0.0 14 0.0 0.0 0.0 13.644697530706571 0.0 15 5.107121881463701E-4 0.0 0.0 14.175838206378796 0.0 16 5.107121881463701E-4 0.0 0.0 14.916370879191032 0.0 17 5.107121881463701E-4 0.0 0.0 15.744746048364444 0.0 18 5.107121881463701E-4 0.0 0.0 16.81213452159036 0.0 19 5.107121881463701E-4 0.0 0.0 17.538367253134496 0.0 20 5.107121881463701E-4 0.0 0.0 18.13998621077092 0.0 21 5.107121881463701E-4 0.0 0.0 18.724240954010366 0.0 22 5.107121881463701E-4 0.0 0.0 19.328413472587524 0.0 23 0.0010214243762927402 0.0 0.0 19.85342560200199 0.0 24 0.0010214243762927402 0.0 0.0 20.334516483235873 0.0 25 0.0010214243762927402 0.0 0.0 20.767089706595847 0.0 26 0.0010214243762927402 0.0 0.0 21.179745154618114 0.0 27 0.0010214243762927402 0.0 0.0 21.607721968284775 0.0 28 0.0010214243762927402 0.0 0.0 21.98258471438421 0.0 29 0.0010214243762927402 0.0 0.0 22.378386660197645 0.0 30 0.0010214243762927402 0.0 0.0 22.806363473864305 0.0 31 0.0010214243762927402 0.0 0.0 23.191951175914813 0.0 32 0.0010214243762927402 0.0 0.0 23.61022445800669 0.0 33 0.0010214243762927402 0.0 0.0 23.981512218789103 0.0 34 0.0010214243762927402 0.0 0.0 24.402849774009855 0.0 35 0.0010214243762927402 0.0 0.0 24.829294451112077 0.0 36 0.0010214243762927402 0.0 0.0 25.246035596639516 0.0 37 0.0010214243762927402 0.0 0.0 25.649498225275146 0.0 38 0.0010214243762927402 0.0 0.0 26.04581088327673 0.0 39 0.0010214243762927402 0.0 0.0 26.447741375347924 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGGTCG 35 1.2050259E-7 45.000004 40 CGGTCGA 35 1.2050259E-7 45.000004 41 GATTCAT 35 1.2050259E-7 45.000004 45 CGGGTTA 25 3.8789192E-5 45.0 6 GAAATCG 25 3.8789192E-5 45.0 7 TAGAGGC 20 7.018941E-4 45.0 4 AAATCGC 25 3.8789192E-5 45.0 8 GATCGTT 20 7.018941E-4 45.0 9 CGACGTT 20 7.018941E-4 45.0 27 ACGTTTT 25 3.8789192E-5 45.0 29 CGCGGGT 20 7.018941E-4 45.0 3 CCCTATG 20 7.018941E-4 45.0 44 TTTCGAC 20 7.018941E-4 45.0 24 AAGACGG 40 6.7648216E-9 45.0 2 CAACACA 20 7.018941E-4 45.0 26 AATGACC 20 7.018941E-4 45.0 12 AGTGAAC 25 3.8789192E-5 45.0 37 CTTGCGG 25 3.8789192E-5 45.0 2 CAAGGAT 20 7.018941E-4 45.0 4 TGTTAGG 25 3.8789192E-5 45.0 2 >>END_MODULE