SRR3551276_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551276_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	440784
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC	7400	1.6788268176703327	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	7291	1.6540981523830267	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC	7077	1.6055482957639118	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCG	6384	1.4483284329739736	No Hit
GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	3540	0.8031144506152674	No Hit
GAATGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTT	2689	0.6100493665831791	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTACCAT	1779	0.40359904170750294	No Hit
GAACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCT	1647	0.3736524011760862	No Hit
GAATGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCT	1594	0.36162837126574465	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTA	1384	0.3139859886021271	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTC	1344	0.30491124904715233	No Hit
CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT	1328	0.3012813532251624	No Hit
CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	949	0.2152981959417765	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC	822	0.18648589785473157	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	598	0.13566735634687282	No Hit
TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC	597	0.13544048785799848	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	596	0.1352136193691241	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	536	0.12160151003666195	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CAACGAA	35	1.2096461E-7	45.000004	45
GACGTGA	20	7.0285477E-4	45.000004	10
CACGCTA	20	7.0285477E-4	45.000004	11
ACGATAG	20	7.0285477E-4	45.000004	1
GTGCTAA	20	7.0285477E-4	45.000004	19
GTATGCG	20	7.0285477E-4	45.000004	1
CGAATTG	20	7.0285477E-4	45.000004	22
CGCAGTA	20	7.0285477E-4	45.000004	40
TATAAGC	20	7.0285477E-4	45.000004	26
TAAGACG	20	7.0285477E-4	45.000004	1
ACGAACG	20	7.0285477E-4	45.000004	1
TTTAGCG	25	3.8868784E-5	45.0	1
CGCGGGC	45	3.8380676E-10	45.0	4
GAATATA	50	2.1827873E-11	45.0	15
CGAATAT	50	2.1827873E-11	45.0	14
CGACTGG	25	3.8868784E-5	45.0	2
TCGACGT	30	2.1624455E-6	44.999996	26
CGTTTTT	3280	0.0	42.667683	1
GCGAACA	90	0.0	42.5	33
CCGATGA	885	0.0	42.45763	18