##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551276_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 440784 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.503130785146467 31.0 31.0 34.0 30.0 34.0 2 31.668840066790082 31.0 31.0 34.0 30.0 34.0 3 31.649540364441542 31.0 31.0 34.0 30.0 34.0 4 35.39264356237976 37.0 35.0 37.0 33.0 37.0 5 34.25774075284039 37.0 35.0 37.0 32.0 37.0 6 34.70323786707321 37.0 35.0 37.0 32.0 37.0 7 35.33407746197684 37.0 35.0 37.0 32.0 37.0 8 34.91129215216523 37.0 35.0 37.0 32.0 37.0 9 36.70732376855784 39.0 37.0 39.0 32.0 39.0 10 36.525454644451706 38.0 35.0 39.0 32.0 39.0 11 36.732869160405095 39.0 35.0 39.0 33.0 39.0 12 36.7307524774039 39.0 35.0 39.0 33.0 39.0 13 36.756223002649826 39.0 35.0 39.0 33.0 39.0 14 37.78420723075248 40.0 37.0 41.0 33.0 41.0 15 37.84363543141312 40.0 37.0 41.0 33.0 41.0 16 38.00330093651312 40.0 37.0 41.0 33.0 41.0 17 37.80954617227486 40.0 36.0 41.0 33.0 41.0 18 37.687994573305744 39.0 36.0 41.0 33.0 41.0 19 37.58804085447748 39.0 36.0 41.0 33.0 41.0 20 37.43190315437947 39.0 35.0 41.0 32.0 41.0 21 37.329524211405136 39.0 35.0 41.0 32.0 41.0 22 37.44238220988058 39.0 35.0 41.0 33.0 41.0 23 37.43122935496751 39.0 35.0 41.0 33.0 41.0 24 37.41509446803877 39.0 35.0 41.0 33.0 41.0 25 37.12958274347526 39.0 35.0 41.0 32.0 41.0 26 37.18146302951105 39.0 35.0 41.0 32.0 41.0 27 37.12628407564703 39.0 35.0 41.0 32.0 41.0 28 36.970141838179245 39.0 35.0 41.0 32.0 41.0 29 36.96361029438455 39.0 35.0 41.0 31.0 41.0 30 36.68680351373916 39.0 35.0 41.0 31.0 41.0 31 36.63978275073505 39.0 35.0 41.0 31.0 41.0 32 36.44872999019928 39.0 35.0 41.0 30.0 41.0 33 36.24589821772115 39.0 35.0 41.0 30.0 41.0 34 35.986887001343064 39.0 35.0 41.0 28.0 41.0 35 35.911795800210534 39.0 35.0 41.0 27.0 41.0 36 35.76089195615086 39.0 35.0 41.0 26.0 41.0 37 35.70128679806889 39.0 35.0 41.0 26.0 41.0 38 35.57889578569095 39.0 35.0 41.0 25.0 41.0 39 35.44039937928781 39.0 35.0 41.0 25.0 41.0 40 35.36701196050673 39.0 35.0 40.0 25.0 41.0 41 35.171306127264145 38.0 35.0 40.0 24.0 41.0 42 35.285906475734144 39.0 35.0 40.0 24.0 41.0 43 35.26063332607354 39.0 35.0 40.0 24.0 41.0 44 35.38142037823514 39.0 35.0 41.0 24.0 41.0 45 35.40343569639551 39.0 35.0 41.0 24.0 41.0 46 35.335772169588736 39.0 35.0 40.0 24.0 41.0 47 35.187715525064434 38.0 35.0 40.0 24.0 41.0 48 35.15416167555991 38.0 35.0 40.0 24.0 41.0 49 35.16185478601764 38.0 35.0 40.0 24.0 41.0 50 35.05269020654107 38.0 35.0 40.0 24.0 41.0 51 34.12875240480598 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 9.0 9 27.0 10 24.0 11 25.0 12 31.0 13 17.0 14 31.0 15 35.0 16 74.0 17 108.0 18 195.0 19 412.0 20 811.0 21 1390.0 22 2271.0 23 3374.0 24 4396.0 25 5690.0 26 7081.0 27 7859.0 28 7622.0 29 7291.0 30 8042.0 31 9483.0 32 12233.0 33 16698.0 34 27963.0 35 34588.0 36 36257.0 37 51652.0 38 84533.0 39 110540.0 40 22.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.01025445569712 18.371129623579805 20.07967621329268 16.538939707430398 2 32.52749646085157 31.405631783367816 20.260263530436674 15.806608225343933 3 27.561118370902754 30.818949871138695 27.86557588297216 13.754355874986388 4 25.39928854041889 20.60623797597009 37.51610766271008 16.47836582090094 5 28.821826563577623 27.075166067733857 26.368924461867945 17.734082906820575 6 22.26056299684199 36.39809974953719 27.20357363243675 14.137763621184071 7 64.97558895059711 6.441023267632219 23.60634687284475 4.977040908925914 8 63.47235834331555 13.621410940506006 16.378316817307343 6.527913898871103 9 57.24708700860285 8.392092271951796 18.75 15.61082071944535 10 39.026824930124505 21.088333514828125 24.959390540491487 14.925451014555883 11 30.85797125122509 22.288921557951287 28.831355040110353 18.021752150713276 12 24.604568223891974 18.79991106755236 32.65635776253222 23.939162946023448 13 24.465497840211984 22.33429525572616 35.90602199716868 17.29418490689317 14 17.880413082144543 29.81641801880286 31.830329594540636 20.47283930451196 15 16.25149733202657 22.994936295328326 39.77730589132092 20.976260481324186 16 17.858179970234854 24.379968419906348 32.228483792515156 25.533367817343645 17 17.82687211877019 26.82810628334967 32.86484990380776 22.48017169407238 18 18.95758466732005 23.49586191876293 33.050428327706996 24.49612508621003 19 20.60056626374823 24.277650731424007 30.579149878398486 24.542633126429273 20 23.67803731532905 23.720915459726307 34.144388181059206 18.45665904388544 21 21.05747940034121 28.841110385131945 31.812633852408435 18.28877636211841 22 18.838932447638754 22.301626193328254 34.496034338814475 24.36340702021852 23 20.77412065773712 25.55877708809757 32.403853134415044 21.263249119750263 24 20.734418672184106 24.61364296344695 31.107299720498023 23.544638643870922 25 18.068033322443647 30.992277396638716 29.312543105012885 21.627146175904752 26 18.072343823732258 25.91564122109695 32.57740752840393 23.434607426766853 27 23.773322080656285 24.917646738538604 29.40555918545138 21.903471995353733 28 17.879505608189046 26.22940034121021 33.51528186141058 22.37581218919017 29 20.124142437112056 24.66604958437693 33.12529492903554 22.08451304947548 30 21.178854041888997 28.301617118588695 29.914425205996586 20.60510363352572 31 21.50078042760173 24.431240698391957 26.71648698682348 27.35149188718284 32 22.686622018948054 27.210379687102982 29.057089186540345 21.045909107408615 33 21.26619841010563 27.064730117245634 27.13619369124106 24.532877781407674 34 19.341673018984356 26.63844422665069 27.539338995970812 26.48054375839413 35 21.834050237758177 25.10118334603797 26.84330647210425 26.221459944099607 36 19.24684199063487 31.45259356056481 25.096192239282733 24.204372209517587 37 20.81972122400087 25.55242477040909 30.42056880467531 23.207285200914736 38 18.675360267160332 27.13188318995245 26.185841591346325 28.00691495154089 39 20.848306653599042 25.493892700279503 29.528748774910156 24.129051871211296 40 20.506642709354242 25.268158553849506 28.660296199499076 25.56490253729718 41 17.834131910414172 27.22898290319068 26.203537333478526 28.73334785291662 42 20.16838179244256 25.05535591128535 29.13989618497949 25.63636611129261 43 21.820891865403464 26.481451232349634 27.66298232240735 24.034674579839557 44 21.325637954190714 23.72159606519293 29.362681041054124 25.590084939562235 45 19.55742495190388 22.857000254092707 28.46677737848924 29.118797415514173 46 23.180514719227556 26.86395150459182 27.573369269301974 22.382164506878652 47 18.343678536426005 24.64222839304512 34.03322262151076 22.980870449018113 48 19.928808668191223 24.486823478166176 29.347934589277287 26.23643326436531 49 19.920868271080618 22.59496714944281 33.7133380521979 23.77082652727867 50 20.032714436095684 22.932320592398998 31.451686086609314 25.583278884896004 51 19.653617191186612 21.89348978184326 28.907129115394387 29.54576391157574 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 186.0 1 449.5 2 713.0 3 6115.0 4 11517.0 5 7519.0 6 3521.0 7 3383.5 8 3246.0 9 3112.0 10 2978.0 11 2935.0 12 2892.0 13 2687.0 14 2482.0 15 2252.0 16 2022.0 17 1921.5 18 1821.0 19 1722.5 20 1624.0 21 1732.5 22 1841.0 23 1789.0 24 1737.0 25 2240.5 26 3513.5 27 4283.0 28 4957.0 29 5631.0 30 5809.5 31 5988.0 32 6602.5 33 7217.0 34 7896.0 35 8575.0 36 9146.0 37 9717.0 38 10352.5 39 10988.0 40 13238.0 41 15488.0 42 18034.5 43 20581.0 44 23422.5 45 26264.0 46 44514.5 47 62765.0 48 54188.0 49 45611.0 50 43256.5 51 40902.0 52 34834.5 53 28767.0 54 25458.5 55 22150.0 56 20437.5 57 18725.0 58 17095.5 59 15466.0 60 14741.0 61 14016.0 62 12860.0 63 11704.0 64 9998.0 65 8292.0 66 6900.0 67 5508.0 68 4825.5 69 4143.0 70 3661.5 71 3180.0 72 2714.5 73 2249.0 74 1895.5 75 1201.0 76 860.0 77 640.5 78 421.0 79 319.5 80 218.0 81 155.5 82 93.0 83 93.5 84 94.0 85 56.0 86 18.0 87 10.0 88 2.0 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 440784.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.43328264349432 #Duplication Level Percentage of deduplicated Percentage of total 1 77.05385339681038 26.53217112782747 2 9.360649889478358 6.446358067424045 3 3.1005802454627447 3.2028946785256114 4 1.5693957087988333 2.161577840822294 5 0.9600199436939609 1.6528319032302834 6 0.7338085405425564 1.5160462129627144 7 0.583359076076576 1.4060877564434713 8 0.4856665990758965 1.3378476221187987 9 0.4555465415105346 1.4117366538988703 >10 5.553067915778575 38.52567713338959 >50 0.08563468395178071 2.0373344220401344 >100 0.04646843315212907 2.899309975222379 >500 0.003983008555896778 0.9367212455425189 >1k 0.005310678074529037 3.498418414599378 >5k 0.0026553390372645183 6.434986945952413 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTC 7400 1.6788268176703327 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7291 1.6540981523830267 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGC 7077 1.6055482957639118 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCG 6384 1.4483284329739736 No Hit GCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 3540 0.8031144506152674 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTT 2689 0.6100493665831791 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGCTACCAT 1779 0.40359904170750294 No Hit GAACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCT 1647 0.3736524011760862 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCT 1594 0.36162837126574465 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGCTACCATCGTA 1384 0.3139859886021271 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTC 1344 0.30491124904715233 No Hit CTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGCT 1328 0.3012813532251624 No Hit CCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 949 0.2152981959417765 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCC 822 0.18648589785473157 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 598 0.13566735634687282 No Hit TCTGTCTCTTATACACATCTGACGCAGCTACCATCGTATGCCGTCTTCTGC 597 0.13544048785799848 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 596 0.1352136193691241 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 536 0.12160151003666195 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.3105829612690116 0.0 2 0.0 0.0 0.0 1.5998765835420523 0.0 3 0.0 0.0 0.0 2.0132309702711533 0.0 4 0.0 0.0 0.0 2.8562742749283094 0.0 5 0.0 0.0 0.0 5.759283458564739 0.0 6 0.0 0.0 0.0 7.113234600166975 0.0 7 0.0 0.0 0.0 8.180650840320883 0.0 8 0.0 0.0 0.0 9.547079748811209 0.0 9 0.0 0.0 0.0 9.967693927184289 0.0 10 0.0 0.0 0.0 12.430578242404444 0.0 11 0.0 0.0 0.0 13.84737195542488 0.0 12 0.0 0.0 0.0 16.736315292751097 0.0 13 0.0 0.0 0.0 17.43166721115104 0.0 14 0.0 0.0 0.0 17.783993974372937 0.0 15 0.0 0.0 0.0 18.509292533304293 0.0 16 0.0 0.0 0.0 19.29924861156485 0.0 17 0.0 0.0 0.0 20.13843515191114 0.0 18 0.0 0.0 0.0 21.03252386656503 0.0 19 0.0 0.0 0.0 22.013049475480052 0.0 20 0.0 0.0 0.0 22.62446005299648 0.0 21 0.0 0.0 0.0 23.293495226686993 0.0 22 0.0 0.0 0.0 23.960715452466513 0.0 23 0.0 0.0 0.0 24.56486623833896 0.0 24 0.0 0.0 0.0 25.063523176884825 0.0 25 0.0 0.0 0.0 25.509092889034086 0.0 26 0.0 0.0 0.0 26.027941123089768 0.0 27 0.0 0.0 0.0 26.512759083814295 0.0 28 0.0 0.0 0.0 26.928609023921013 0.0 29 0.0 0.0 0.0 27.35103815020509 0.0 30 0.0 0.0 0.0 27.828596319285637 0.0 31 0.0 0.0 0.0 28.316590438854405 0.0 32 0.0 0.0 0.0 28.73584340629424 0.0 33 0.0 0.0 0.0 29.188446041598606 0.0 34 0.0 0.0 0.0 29.64195615085847 0.0 35 0.0 0.0 0.0 30.07708991251951 0.0 36 0.0 0.0 0.0 30.5029220661367 0.0 37 0.0 0.0 0.0 30.93056916766489 0.0 38 0.0 0.0 0.0 31.342108606482995 0.0 39 0.0 0.0 0.0 31.763176521833824 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAACGAA 35 1.2096461E-7 45.000004 45 GACGTGA 20 7.0285477E-4 45.000004 10 CACGCTA 20 7.0285477E-4 45.000004 11 ACGATAG 20 7.0285477E-4 45.000004 1 GTGCTAA 20 7.0285477E-4 45.000004 19 GTATGCG 20 7.0285477E-4 45.000004 1 CGAATTG 20 7.0285477E-4 45.000004 22 CGCAGTA 20 7.0285477E-4 45.000004 40 TATAAGC 20 7.0285477E-4 45.000004 26 TAAGACG 20 7.0285477E-4 45.000004 1 ACGAACG 20 7.0285477E-4 45.000004 1 TTTAGCG 25 3.8868784E-5 45.0 1 CGCGGGC 45 3.8380676E-10 45.0 4 GAATATA 50 2.1827873E-11 45.0 15 CGAATAT 50 2.1827873E-11 45.0 14 CGACTGG 25 3.8868784E-5 45.0 2 TCGACGT 30 2.1624455E-6 44.999996 26 CGTTTTT 3280 0.0 42.667683 1 GCGAACA 90 0.0 42.5 33 CCGATGA 885 0.0 42.45763 18 >>END_MODULE