##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551268_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 784978 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60632909457335 31.0 31.0 34.0 30.0 34.0 2 31.77299745980142 33.0 31.0 34.0 30.0 34.0 3 31.73344985464561 33.0 31.0 34.0 30.0 34.0 4 35.45074511642365 37.0 35.0 37.0 33.0 37.0 5 34.265632922196545 37.0 35.0 37.0 32.0 37.0 6 34.75450140003924 37.0 35.0 37.0 32.0 37.0 7 35.48876529023743 37.0 35.0 37.0 33.0 37.0 8 35.359746387796854 37.0 35.0 37.0 33.0 37.0 9 37.26118311595994 39.0 37.0 39.0 34.0 39.0 10 36.68352743643771 39.0 35.0 39.0 32.0 39.0 11 36.89140077811098 39.0 37.0 39.0 33.0 39.0 12 36.9167709158728 39.0 37.0 39.0 33.0 39.0 13 37.0526779094446 39.0 37.0 39.0 33.0 39.0 14 38.112459202678295 40.0 37.0 41.0 33.0 41.0 15 38.20623635312072 40.0 37.0 41.0 33.0 41.0 16 38.261620070880966 40.0 37.0 41.0 34.0 41.0 17 38.18818361788483 40.0 37.0 41.0 34.0 41.0 18 38.01814445755168 39.0 37.0 41.0 34.0 41.0 19 37.83289977553511 39.0 37.0 41.0 34.0 41.0 20 37.82903724690374 39.0 36.0 41.0 34.0 41.0 21 37.711407198673086 39.0 35.0 41.0 33.0 41.0 22 37.838738155719014 39.0 35.0 41.0 34.0 41.0 23 37.914268934925566 40.0 35.0 41.0 34.0 41.0 24 37.78441561419556 40.0 35.0 41.0 34.0 41.0 25 37.50427145728925 39.0 35.0 41.0 33.0 41.0 26 37.62218686383567 39.0 35.0 41.0 33.0 41.0 27 37.68535169138498 39.0 35.0 41.0 33.0 41.0 28 37.55347156226034 39.0 35.0 41.0 33.0 41.0 29 37.5355411234455 39.0 35.0 41.0 33.0 41.0 30 37.20280313588406 39.0 35.0 41.0 33.0 41.0 31 36.9999732476579 39.0 35.0 41.0 32.0 41.0 32 36.8607362244547 39.0 35.0 41.0 32.0 41.0 33 36.64007908501895 39.0 35.0 41.0 31.0 41.0 34 36.30815640693115 39.0 35.0 41.0 30.0 41.0 35 36.184444659595556 39.0 35.0 41.0 30.0 41.0 36 35.9236997724777 39.0 35.0 41.0 27.0 41.0 37 35.91555049950445 39.0 35.0 41.0 28.0 41.0 38 35.708523041410075 39.0 35.0 41.0 26.0 41.0 39 35.69695329041069 39.0 35.0 41.0 26.0 41.0 40 35.603981258073475 39.0 35.0 41.0 26.0 41.0 41 35.460123723212625 39.0 35.0 40.0 25.0 41.0 42 35.55407794868137 39.0 35.0 41.0 25.0 41.0 43 35.5357156506297 39.0 35.0 41.0 25.0 41.0 44 35.60143851165255 39.0 35.0 41.0 25.0 41.0 45 35.607362244546984 39.0 35.0 41.0 25.0 41.0 46 35.533141056182465 39.0 35.0 41.0 25.0 41.0 47 35.46941825121213 39.0 35.0 41.0 25.0 41.0 48 35.428457867609026 39.0 35.0 41.0 25.0 41.0 49 35.413132597346674 39.0 35.0 41.0 25.0 41.0 50 35.31648785061492 39.0 35.0 40.0 24.0 41.0 51 34.36345349805982 37.0 34.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 11.0 9 28.0 10 30.0 11 28.0 12 31.0 13 37.0 14 50.0 15 65.0 16 93.0 17 172.0 18 274.0 19 560.0 20 961.0 21 1639.0 22 2390.0 23 3668.0 24 5746.0 25 9594.0 26 12871.0 27 14359.0 28 12988.0 29 12344.0 30 12915.0 31 15253.0 32 19237.0 33 26491.0 34 45051.0 35 57038.0 36 63447.0 37 94959.0 38 166191.0 39 206406.0 40 49.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.62406844523031 19.018622177946387 22.25170641724991 18.10560295957339 2 38.06017493483893 24.13124953820362 22.87414424353294 14.934431283424503 3 29.46655829844913 23.419509846135817 32.2138964404098 14.900035415005261 4 25.62721503023015 22.813505601430865 34.46300405871247 17.096275309626513 5 23.674548840859234 29.195213114252883 30.013452606315084 17.1167854385728 6 22.83235963300882 32.64397218775558 30.834367332587664 13.689300846647932 7 71.1687461304648 5.2504656181447125 18.72905992269847 4.8517283286920145 8 71.74978152253948 6.353681249665595 16.360968078086266 5.535569149708654 9 66.19051744125312 6.41712251808331 18.55809971744431 8.83426032321925 10 35.12353212446718 22.67260993301723 26.736672874908596 15.467185067606989 11 27.39427092224241 23.625630272440755 30.3158814641939 18.664217341122935 12 22.92803110405642 20.504523693657656 36.06559674283865 20.501848459447274 13 22.495789690921274 22.09985502778422 37.994058432210835 17.410296849083668 14 19.323598877930337 25.92913431968794 35.19716476130541 19.55010204107631 15 18.02789377536695 24.506928856604898 39.31982807161475 18.1453492964134 16 19.66004142791263 24.15774709609696 35.517810690235905 20.664400785754506 17 20.04998866210263 24.79993069869474 33.81152083243097 21.338559806771652 18 20.618030059441157 23.55467286981291 35.12123906657257 20.706058004173368 19 20.622616175230387 26.35436916703398 32.636328661440196 20.386685996295437 20 21.68965244885844 25.64288425917669 34.058534124523234 18.608929167441634 21 21.230021733093157 26.831834777535168 34.0194247482095 17.918718741162174 22 19.002443380578818 23.943600967160865 33.7637487929598 23.290206859300515 23 19.4038559042419 25.71689907233069 33.43291149560879 21.446333527818613 24 20.1697372410437 24.56616618554915 33.350743587718384 21.91335298568877 25 19.152001712149893 27.73746525380329 31.619739661493696 21.490793372553117 26 18.50969071744686 26.821388624904134 33.54578090086601 21.123139756782994 27 21.706722990962803 25.4199480749779 32.23185872725096 20.641470206808343 28 18.67020477006999 25.4702679565542 34.923781303425066 20.93574596995075 29 20.900840533110483 25.202107574989363 32.68078850617469 21.21626338572546 30 21.998705696210592 26.529278527551092 31.930576398319445 19.54143937791887 31 22.2356550119876 25.265548843407075 31.419224487820042 21.079571656785287 32 23.461167064554676 26.89196385121621 30.536397198392823 19.11047188583629 33 23.52970401718265 26.171816280201483 29.357128480033833 20.941351222582032 34 22.467890819870114 26.34723520913962 30.719714437856858 20.465159533133413 35 23.823215427693516 25.31319349077299 30.219827816830534 20.64376326470296 36 24.10436980399451 27.275668872248648 29.791535558958337 18.828425764798503 37 24.62718700396699 25.7566454091707 31.23654420888229 18.37962337798002 38 22.046859911997537 26.905467414373398 30.43805049313484 20.60962218049423 39 25.393705301295068 25.459184843396887 29.042979548471422 20.104130306836623 40 23.070073301417366 25.00681547763122 31.953124800949833 19.96998642000158 41 22.676686480385438 25.29816122235273 29.9832606773693 22.04189161989253 42 22.88701084616384 24.91394663289927 31.804330822010296 20.394711698926592 43 23.979143364527413 24.205773919778643 30.739969782592635 21.07511293310131 44 22.681782164595695 24.686933901332267 30.048230651050094 22.583053283021943 45 22.516299819867562 23.966531546107024 29.694080598437157 23.823088035588256 46 23.935957440845478 25.43892949866111 29.836887148429636 20.788225912063776 47 21.091036946258367 24.844263151323986 33.11787081930959 20.946829083108064 48 21.779081706748467 24.08385967504822 31.52941865886687 22.60763995933644 49 22.356804904086484 22.53757430144539 33.28615579035336 21.819465004114765 50 21.69831511201588 22.297694967247487 32.43950785881897 23.56448206191766 51 20.928994188372158 22.45425986460767 30.534613708919228 26.08213223810094 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 310.0 1 599.0 2 888.0 3 10802.5 4 20717.0 5 13662.0 6 6607.0 7 6427.0 8 6247.0 9 6269.0 10 6291.0 11 6175.5 12 6060.0 13 5933.0 14 5806.0 15 5647.0 16 5488.0 17 5076.5 18 4665.0 19 4435.0 20 4205.0 21 4124.0 22 4043.0 23 4079.5 24 4116.0 25 4560.0 26 5655.0 27 6306.0 28 7069.0 29 7832.0 30 9497.5 31 11163.0 32 12410.0 33 13657.0 34 15405.5 35 17154.0 36 18962.0 37 20770.0 38 22323.0 39 23876.0 40 28002.0 41 32128.0 42 36562.5 43 40997.0 44 46298.5 45 51600.0 46 69346.5 47 87093.0 48 86466.5 49 85840.0 50 83410.0 51 80980.0 52 68398.0 53 55816.0 54 48380.5 55 40945.0 56 36683.5 57 32422.0 58 28753.0 59 25084.0 60 23564.5 61 22045.0 62 19124.0 63 16203.0 64 13972.0 65 11741.0 66 9623.5 67 7506.0 68 6050.5 69 4595.0 70 4053.5 71 3512.0 72 2748.5 73 1985.0 74 1778.5 75 1262.0 76 952.0 77 670.5 78 389.0 79 325.5 80 262.0 81 159.5 82 57.0 83 33.5 84 10.0 85 15.0 86 20.0 87 16.5 88 13.0 89 8.5 90 4.0 91 2.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 784978.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.02140842082757 #Duplication Level Percentage of deduplicated Percentage of total 1 75.38465663620812 29.416154752653267 2 9.770327714719299 7.625038963227852 3 3.6662681078477295 4.291888356497429 4 1.9961401172638904 3.115687951238116 5 1.352976284129138 2.639752008334837 6 0.9875011821170461 2.3120212166063565 7 0.796187576362321 2.174785241777608 8 0.6657543596823339 2.078293822168871 9 0.5377466920069832 1.8885269966178115 >10 4.728777217664859 33.58867485929313 >50 0.0712072273513721 1.8903653829089138 >100 0.03443353636718923 2.133003961212665 >500 0.0033430617832218954 0.9950800694837656 >1k 0.0040116741398662755 3.3685051853971935 >5k 3.3430617832218957E-4 0.7577897382841104 >10k+ 3.3430617832218957E-4 1.724431494298099 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13219 1.683996239385053 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTC 5809 0.7400207394347358 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCG 4075 0.5191228289200461 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGC 3770 0.48026823681682795 No Hit GCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 3575 0.45542677629181966 No Hit CTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGCT 2596 0.3307099052457521 TruSeq Adapter, Index 15 (95% over 23bp) GAACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCT 2017 0.2569498763022658 No Hit CCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 1939 0.24701329209226244 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCC 1684 0.21452830525186692 No Hit CGCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTG 1497 0.19070598156891022 TruSeq Adapter, Index 15 (95% over 21bp) CGTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTT 1301 0.16573712893864542 No Hit CGTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTC 1194 0.15210617367620494 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTGAGTGT 1161 0.14790223420274198 No Hit TCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTTCTGC 1013 0.12904820262478695 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCT 978 0.12458947894081107 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCT 968 0.12331555788824655 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTCTT 900 0.11465289473080774 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTGAGTGTCGTATGCCGTC 843 0.10739154473118992 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.34166562629780706 0.0 2 1.2739210525645304E-4 0.0 0.0 1.2895902815110742 0.0 3 1.2739210525645304E-4 0.0 0.0 1.7935534499056025 0.0 4 1.2739210525645304E-4 0.0 0.0 2.5610908840757323 0.0 5 1.2739210525645304E-4 0.0 0.0 4.622932107651424 0.0 6 1.2739210525645304E-4 0.0 0.0 5.921185052319937 0.0 7 1.2739210525645304E-4 0.0 0.0 7.069879665417375 0.0 8 1.2739210525645304E-4 0.0 0.0 8.69846033901587 0.0 9 1.2739210525645304E-4 0.0 0.0 9.428671886345859 0.0 10 1.2739210525645304E-4 0.0 0.0 11.323119883614572 0.0 11 1.2739210525645304E-4 0.0 0.0 13.085334875627087 0.0 12 1.2739210525645304E-4 0.0 0.0 14.909207646583726 0.0 13 1.2739210525645304E-4 0.0 0.0 15.587443214969081 0.0 14 1.2739210525645304E-4 0.0 0.0 15.904522164952393 0.0 15 1.2739210525645304E-4 0.0 0.0 16.427084580714364 0.0 16 1.2739210525645304E-4 0.0 0.0 17.218316946462195 0.0 17 1.2739210525645304E-4 0.0 0.0 18.20904534904163 0.0 18 1.2739210525645304E-4 0.0 0.0 19.277737720038015 0.0 19 1.2739210525645304E-4 0.0 0.0 20.07737796473277 0.0 20 1.2739210525645304E-4 0.0 0.0 20.730772072593115 0.0 21 1.2739210525645304E-4 0.0 0.0 21.451047035713103 0.0 22 1.2739210525645304E-4 0.0 0.0 22.235018051461314 0.0 23 1.2739210525645304E-4 0.0 0.0 23.015549480367604 0.0 24 1.2739210525645304E-4 0.0 0.0 23.640025580334736 0.0 25 1.2739210525645304E-4 0.0 0.0 24.204245214515566 0.0 26 1.2739210525645304E-4 0.0 0.0 24.72375021975138 0.0 27 2.547842105129061E-4 0.0 0.0 25.273064977617206 0.0 28 2.547842105129061E-4 0.0 0.0 25.80594615390495 0.0 29 2.547842105129061E-4 0.0 0.0 26.359719635454752 0.0 30 3.8217631576935914E-4 0.0 0.0 26.984450519632396 0.0 31 5.095684210258122E-4 0.0 0.0 27.554530190655026 0.0 32 5.095684210258122E-4 0.0 0.0 28.10702975115226 0.0 33 5.095684210258122E-4 0.0 0.0 28.648318806386932 0.0 34 5.095684210258122E-4 0.0 0.0 29.171390790569927 0.0 35 5.095684210258122E-4 0.0 0.0 29.701851516857797 0.0 36 6.369605262822653E-4 0.0 0.0 30.230910929987846 0.0 37 6.369605262822653E-4 0.0 0.0 30.766212556275462 0.0 38 6.369605262822653E-4 0.0 0.0 31.271194861512043 0.0 39 6.369605262822653E-4 0.0 0.0 31.793120316747732 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTGCG 30 2.1646192E-6 45.000004 1 TATCGCG 30 2.1646192E-6 45.000004 1 GTCGAAT 35 1.211265E-7 45.0 43 CCGCTCG 20 7.0319185E-4 45.0 19 CGTTATG 20 7.0319185E-4 45.0 1 TCGTCCC 25 3.889672E-5 45.0 38 CGAATAT 55 1.8189894E-12 45.0 14 CGGTCTA 20 7.0319185E-4 45.0 31 CGTTTTT 6740 0.0 43.66469 1 TGTGACG 45 1.9270374E-8 40.0 1 ACGTAAG 45 1.9270374E-8 40.0 1 CTAGCGG 85 0.0 39.705883 2 CGTTATT 285 0.0 39.473686 1 TTCACGG 40 3.4563527E-7 39.375 2 GTTACGG 70 0.0 38.571426 2 CCGACCG 35 6.2457584E-6 38.571426 15 CGATGAA 415 0.0 38.493973 19 TCACGGG 170 0.0 38.382355 3 TACGAAT 65 9.094947E-12 38.07692 12 TACGGGA 225 0.0 38.0 4 >>END_MODULE