SRR3551266_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551266_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	726434
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10328	1.4217396212181699	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG	10267	1.4133424371656613	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC	9670	1.3311601604550447	No Hit
GAATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTC	7932	1.0919092443360305	No Hit
GCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	3866	0.5321887466720996	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAAGCCAT	3010	0.41435285242706155	No Hit
GAATGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCT	2150	0.2959663231621868	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTA	1786	0.2458585363570538	No Hit
GAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT	1582	0.21777615034538583	No Hit
GAATGATACGGCGACCACCGATGAATGATACGGCGAGCACCCATCGAATGC	1476	0.2031843223197152	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTC	1460	0.2009817822403687	No Hit
CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT	1343	0.18487570791014737	No Hit
CCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC	852	0.11728525922520146	No Hit
CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA	812	0.1117789090268352	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCC	751	0.10338172497432664	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	728	0.10021557361026603	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGCG	35	1.2111013E-7	45.000004	1
TGCGTAG	35	1.2111013E-7	45.000004	1
TGTGCGA	20	7.0315704E-4	45.0	1
TGTTGCG	25	3.8893828E-5	45.0	1
ACTAGCG	20	7.0315704E-4	45.0	1
CGTGTTC	20	7.0315704E-4	45.0	23
ATAACGG	20	7.0315704E-4	45.0	2
ACGTAAG	20	7.0315704E-4	45.0	1
TGTCGGA	20	7.0315704E-4	45.0	29
CGAACCC	120	0.0	44.999996	34
CTAGTCG	30	2.1643955E-6	44.999996	29
CGAATGC	370	0.0	43.175674	45
CGTTTTT	4325	0.0	43.07514	1
GATGAAT	2335	0.0	43.072803	20
ATCGAAT	430	0.0	42.383724	43
CGATGAA	2260	0.0	42.11283	19
CCGATGA	2165	0.0	41.882217	18
CCCATCG	480	0.0	41.718746	40
TGAATGA	2425	0.0	41.56701	22
GCGAACC	130	0.0	41.53846	33