##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551266_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 726434 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.60484916730219 31.0 31.0 34.0 30.0 34.0 2 31.77664178714102 33.0 31.0 34.0 30.0 34.0 3 31.76228397899878 33.0 31.0 34.0 30.0 34.0 4 35.48811454309683 37.0 35.0 37.0 33.0 37.0 5 34.26622101939061 37.0 35.0 37.0 32.0 37.0 6 34.741536051451334 37.0 35.0 37.0 32.0 37.0 7 35.43397748453404 37.0 35.0 37.0 33.0 37.0 8 35.070526709928224 37.0 35.0 37.0 32.0 37.0 9 36.85884195948978 39.0 37.0 39.0 32.0 39.0 10 36.61691771034946 39.0 35.0 39.0 32.0 39.0 11 36.80526241888458 39.0 37.0 39.0 33.0 39.0 12 36.75958862057668 39.0 35.0 39.0 33.0 39.0 13 36.761368548278305 39.0 35.0 39.0 32.0 39.0 14 37.828456542507645 40.0 37.0 41.0 33.0 41.0 15 37.90723864797077 40.0 37.0 41.0 33.0 41.0 16 38.059537411519834 40.0 37.0 41.0 33.0 41.0 17 37.85473284565425 40.0 37.0 41.0 33.0 41.0 18 37.811000035791274 39.0 37.0 41.0 33.0 41.0 19 37.67260618308064 39.0 37.0 41.0 33.0 41.0 20 37.44201262606101 39.0 35.0 41.0 32.0 41.0 21 37.522994518428376 39.0 35.0 41.0 33.0 41.0 22 37.58891791959077 39.0 35.0 41.0 33.0 41.0 23 37.484668944460196 39.0 35.0 41.0 33.0 41.0 24 37.4684967939276 39.0 35.0 41.0 33.0 41.0 25 37.32666422551808 39.0 35.0 41.0 33.0 41.0 26 37.29410655338269 39.0 35.0 41.0 33.0 41.0 27 37.21948449549443 39.0 35.0 41.0 32.0 41.0 28 37.1366882607367 39.0 35.0 41.0 32.0 41.0 29 37.16864298752537 39.0 35.0 41.0 32.0 41.0 30 36.899237921132546 39.0 35.0 41.0 31.0 41.0 31 36.73458290773835 39.0 35.0 41.0 31.0 41.0 32 36.49085945867071 39.0 35.0 41.0 30.0 41.0 33 36.36912093872258 39.0 35.0 41.0 30.0 41.0 34 36.140121470085376 39.0 35.0 41.0 29.0 41.0 35 35.995607309129255 39.0 35.0 41.0 27.0 41.0 36 35.8532241056999 39.0 35.0 41.0 27.0 41.0 37 35.70094186120143 39.0 35.0 41.0 26.0 41.0 38 35.531069580994284 39.0 35.0 41.0 24.0 41.0 39 35.51632770492571 39.0 35.0 41.0 24.0 41.0 40 35.473698918277506 39.0 35.0 41.0 25.0 41.0 41 35.41441617545434 39.0 35.0 40.0 25.0 41.0 42 35.451625336919804 39.0 35.0 41.0 25.0 41.0 43 35.36596992982157 39.0 35.0 41.0 24.0 41.0 44 35.47491719825889 39.0 35.0 41.0 25.0 41.0 45 35.442460017014625 39.0 35.0 41.0 24.0 41.0 46 35.37142947604325 39.0 35.0 41.0 24.0 41.0 47 35.15776794588359 38.0 35.0 41.0 23.0 41.0 48 35.200618363127276 38.0 35.0 41.0 23.0 41.0 49 35.220047519802215 38.0 35.0 41.0 24.0 41.0 50 35.088313597656494 38.0 35.0 40.0 24.0 41.0 51 34.256295823158055 37.0 34.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 10.0 9 21.0 10 30.0 11 35.0 12 16.0 13 39.0 14 43.0 15 77.0 16 100.0 17 168.0 18 240.0 19 553.0 20 1153.0 21 2803.0 22 5054.0 23 6850.0 24 7989.0 25 9500.0 26 11274.0 27 11534.0 28 11318.0 29 10838.0 30 11512.0 31 14177.0 32 18335.0 33 25747.0 34 44164.0 35 56599.0 36 57651.0 37 83387.0 38 139908.0 39 195257.0 40 52.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.953245580465676 18.32953854032163 20.546670447693803 15.1705454315189 2 33.23481555103423 30.154287932558223 21.042379624301727 15.568516892105821 3 29.127078303052993 29.842628511330695 27.16103596472632 13.869257220889992 4 25.95308038995972 22.114878984188515 35.48925298100034 16.442787644851425 5 28.97703026014751 28.446631077289886 24.626738285928244 17.949600376634354 6 22.684235594699587 38.499849951957096 26.02989397522693 12.786020478116388 7 68.51881932839046 5.895098522370924 21.228081284741627 4.358000864496981 8 67.9892460980626 13.290952791306573 13.715079415335735 5.004721695295099 9 62.8291076684186 7.515479726995157 15.185550235809448 14.469862368776793 10 40.58111266818458 22.418141221363538 21.81175440576845 15.188991704683428 11 32.344989358978246 22.6882276985934 27.2200915706038 17.746691371824557 12 25.785549685174423 20.290212187204894 30.550469829330673 23.373768298290003 13 26.265152787452127 22.385791413948137 34.2672562132279 17.08179958537183 14 19.877373581082384 30.325260106217495 29.664360423658586 20.133005889041534 15 18.04775106892023 23.734434236282993 35.96747949572845 22.250335199068324 16 19.453935250828017 23.104370114834932 31.62998978572038 25.811704848616667 17 20.175267126814 26.501375210962042 32.28084037916727 21.042517283056686 18 20.8675530055036 22.93560048125501 31.603421646013263 24.59342486722813 19 21.36023368950242 24.62962911978239 29.534135241467226 24.47600194924797 20 25.16209318396441 23.477975975794084 33.60883438825826 17.75109645198325 21 22.24510416637988 29.10023484583596 30.38982206229334 18.26483892549082 22 20.577506008804654 22.02457484093531 34.11775880534226 23.28016034491778 23 23.283877131301672 26.00071031917559 30.622052381909437 20.0933601676133 24 21.53258245071128 26.138782050399623 30.002587984593234 22.326047514295862 25 19.129886541654162 30.12042387883827 29.60103739637737 21.148652183130196 26 19.132639716753346 24.159662130351826 34.896632040901174 21.811066111993657 27 24.608429671518678 25.13373548044282 29.98496766395846 20.27286718408004 28 18.035774757238784 28.346415503679616 33.18539605800389 20.4324136810777 29 21.414333580201365 23.455812916245662 34.590341311117044 20.53951219243593 30 22.52372548641721 28.291214342940997 30.334620901554715 18.850439269087076 31 21.923395656040327 25.486141893138264 27.374407034913013 25.216055415908396 32 24.888565237860565 28.18260158527822 27.45328550150461 19.475547675356605 33 25.01163216479405 24.811338676328475 26.917517627203573 23.259511531673905 34 20.61632577770314 25.46865923125845 29.015024076516244 24.89999091452217 35 24.617239831836066 23.96983070726315 27.540285834638794 23.872643626261986 36 21.087256378418413 30.914026601177806 27.89916220881732 20.09955481158646 37 22.23477975975794 27.718140946046027 28.46700457302384 21.580074721172192 38 21.667901006836136 28.759667086067008 25.108543928285293 24.463887978811563 39 22.008881742869963 27.524179760308577 27.335174289749652 23.131764207071807 40 22.736683580339026 23.12584488060856 28.406021744576933 25.73144979447548 41 19.13787074944179 26.88076273962948 26.795276652799842 27.186089858128888 42 20.19619125756779 25.73929634350815 29.375414696999314 24.689097701924744 43 22.20380653989213 27.467189035755485 27.605673743244395 22.723330681107985 44 21.929039664993656 24.677672025263135 29.837948113662083 23.555340196081133 45 21.086568084643613 23.890952240671552 28.162778724564102 26.859700950120725 46 24.153742803888584 27.254506259343586 27.351142705324914 21.240608231442913 47 19.652576834234083 26.66807996321758 32.542529672344635 21.136813530203707 48 21.029852677600445 26.196461068727512 28.57933411707051 24.194352136601534 49 20.708281826015853 23.38271611736235 32.810826585760026 23.09817547086177 50 21.914585495722942 24.11946577390375 30.051456842603734 23.91449188776957 51 20.309071436634298 23.214359460047298 29.10463992599465 27.37192917732375 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 280.0 1 707.0 2 1134.0 3 8870.0 4 16606.0 5 10855.0 6 5104.0 7 4749.0 8 4394.0 9 4351.5 10 4309.0 11 4141.0 12 3973.0 13 3802.5 14 3632.0 15 3507.5 16 3383.0 17 3209.5 18 3036.0 19 3050.5 20 3065.0 21 3547.5 22 4030.0 23 4244.0 24 4458.0 25 4534.0 26 5420.5 27 6231.0 28 6829.5 29 7428.0 30 8767.5 31 10107.0 32 11620.5 33 13134.0 34 14331.0 35 15528.0 36 17036.0 37 18544.0 38 19785.0 39 21026.0 40 24025.0 41 27024.0 42 30819.5 43 34615.0 44 38904.5 45 43194.0 46 64733.5 47 86273.0 48 76320.0 49 66367.0 50 64662.0 51 62957.0 52 57425.5 53 51894.0 54 48116.0 55 44338.0 56 39357.5 57 34377.0 58 31759.5 59 29142.0 60 27423.5 61 25705.0 62 23258.5 63 20812.0 64 18643.0 65 16474.0 66 13799.0 67 11124.0 68 9266.5 69 7409.0 70 5667.0 71 3925.0 72 3377.5 73 2830.0 74 2263.5 75 1398.0 76 1099.0 77 988.0 78 877.0 79 520.5 80 164.0 81 121.5 82 79.0 83 56.0 84 33.0 85 18.5 86 4.0 87 2.5 88 1.0 89 3.0 90 5.0 91 3.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 726434.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.782882589018243 #Duplication Level Percentage of deduplicated Percentage of total 1 76.03983674712202 22.646855299276503 2 9.059325221837547 5.396256388354387 3 3.1610333737350484 2.8243405748975756 4 1.5684410659222683 1.8685078445663017 5 1.013846604485117 1.509763719232753 6 0.7556466526422463 1.3503201320657203 7 0.5756616972478209 1.2001405318088771 8 0.5037175960861873 1.2001729617805945 9 0.4250081591944115 1.1392171294195739 >10 6.595186026911032 44.91859984330133 >50 0.23959131527341027 4.405192151227726 >100 0.051474696639669464 2.803696864864739 >500 0.005615421451600305 1.0897303666738278 >1k 0.0037436143010668695 2.3237081984336525 >5k 9.359035752667174E-4 2.45318249318234 >10k+ 9.359035752667174E-4 2.870315500914117 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10328 1.4217396212181699 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCG 10267 1.4133424371656613 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGC 9670 1.3311601604550447 No Hit GAATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTC 7932 1.0919092443360305 No Hit GCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 3866 0.5321887466720996 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGAAGCCAT 3010 0.41435285242706155 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCT 2150 0.2959663231621868 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTA 1786 0.2458585363570538 No Hit GAACTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCT 1582 0.21777615034538583 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAGCACCCATCGAATGC 1476 0.2031843223197152 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTC 1460 0.2009817822403687 No Hit CTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGCT 1343 0.18487570791014737 No Hit CCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCCGTCTTCTGC 852 0.11728525922520146 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 812 0.1117789090268352 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGAAGCCATCGTATGCC 751 0.10338172497432664 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 728 0.10021557361026603 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.19230928067794184 0.0 2 0.0 0.0 0.0 1.0104152614002098 0.0 3 0.0 0.0 0.0 1.2308069280898195 0.0 4 0.0 0.0 0.0 1.7035270926195636 0.0 5 0.0 0.0 0.0 3.5524218304759962 0.0 6 0.0 0.0 0.0 4.0972751826043385 0.0 7 0.0 0.0 0.0 4.856738533714005 0.0 8 0.0 0.0 0.0 5.743260915650975 0.0 9 0.0 0.0 0.0 6.038538945038366 0.0 10 0.0 0.0 0.0 8.198404810347533 0.0 11 0.0 0.0 0.0 9.214739398210988 0.0 12 0.0 0.0 0.0 11.44370995850965 0.0 13 0.0 0.0 0.0 11.897570873609991 0.0 14 0.0 0.0 0.0 12.10502261733344 0.0 15 0.0 0.0 0.0 12.643406007978701 0.0 16 0.0 0.0 0.0 13.260117230195723 0.0 17 0.0 0.0 0.0 13.912895046212045 0.0 18 0.0 0.0 0.0 14.61385342646407 0.0 19 0.0 0.0 0.0 15.507947039923792 0.0 20 0.0 0.0 0.0 15.986861848426699 0.0 21 0.0 0.0 0.0 16.469218125803582 0.0 22 1.3765875495915663E-4 0.0 0.0 16.98709036195993 0.0 23 1.3765875495915663E-4 0.0 0.0 17.476054259574855 0.0 24 1.3765875495915663E-4 0.0 0.0 17.864664924824552 0.0 25 1.3765875495915663E-4 0.0 0.0 18.225330862817543 0.0 26 1.3765875495915663E-4 0.0 0.0 18.560116954878215 0.0 27 1.3765875495915663E-4 0.0 0.0 18.938678531015896 0.0 28 1.3765875495915663E-4 0.0 0.0 19.2898460149167 0.0 29 1.3765875495915663E-4 0.0 0.0 19.63302929102988 0.0 30 1.3765875495915663E-4 0.0 0.0 20.011315549657642 0.0 31 1.3765875495915663E-4 0.0 0.0 20.373082757690305 0.0 32 1.3765875495915663E-4 0.0 0.0 20.74131992720605 0.0 33 1.3765875495915663E-4 0.0 0.0 21.101435230179206 0.0 34 1.3765875495915663E-4 0.0 0.0 21.449436562715952 0.0 35 1.3765875495915663E-4 0.0 0.0 21.814369922112675 0.0 36 1.3765875495915663E-4 0.0 0.0 22.170906097456893 0.0 37 1.3765875495915663E-4 0.0 0.0 22.524413780192006 0.0 38 1.3765875495915663E-4 0.0 0.0 22.892100314687912 0.0 39 1.3765875495915663E-4 0.0 0.0 23.23679783710564 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTTAGCG 35 1.2111013E-7 45.000004 1 TGCGTAG 35 1.2111013E-7 45.000004 1 TGTGCGA 20 7.0315704E-4 45.0 1 TGTTGCG 25 3.8893828E-5 45.0 1 ACTAGCG 20 7.0315704E-4 45.0 1 CGTGTTC 20 7.0315704E-4 45.0 23 ATAACGG 20 7.0315704E-4 45.0 2 ACGTAAG 20 7.0315704E-4 45.0 1 TGTCGGA 20 7.0315704E-4 45.0 29 CGAACCC 120 0.0 44.999996 34 CTAGTCG 30 2.1643955E-6 44.999996 29 CGAATGC 370 0.0 43.175674 45 CGTTTTT 4325 0.0 43.07514 1 GATGAAT 2335 0.0 43.072803 20 ATCGAAT 430 0.0 42.383724 43 CGATGAA 2260 0.0 42.11283 19 CCGATGA 2165 0.0 41.882217 18 CCCATCG 480 0.0 41.718746 40 TGAATGA 2425 0.0 41.56701 22 GCGAACC 130 0.0 41.53846 33 >>END_MODULE