##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551264_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 692133 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.637766151881213 33.0 31.0 34.0 30.0 34.0 2 31.77811489988196 33.0 31.0 34.0 30.0 34.0 3 31.758591195622806 33.0 31.0 34.0 30.0 34.0 4 35.46611272688919 37.0 35.0 37.0 33.0 37.0 5 34.262131700121216 37.0 35.0 37.0 32.0 37.0 6 34.74232120127201 37.0 35.0 37.0 32.0 37.0 7 35.48093068817698 37.0 35.0 37.0 33.0 37.0 8 35.2581555857039 37.0 35.0 37.0 32.0 37.0 9 37.16435280502447 39.0 37.0 39.0 34.0 39.0 10 36.70480240069467 39.0 35.0 39.0 32.0 39.0 11 36.853509368864074 39.0 37.0 39.0 33.0 39.0 12 36.852823084580564 39.0 37.0 39.0 33.0 39.0 13 36.97093766660454 39.0 37.0 39.0 33.0 39.0 14 37.99893373094478 40.0 37.0 41.0 33.0 41.0 15 38.13847627551352 40.0 37.0 41.0 33.0 41.0 16 38.18020091514203 40.0 37.0 41.0 34.0 41.0 17 38.108669865473836 40.0 37.0 41.0 34.0 41.0 18 38.01811068103963 40.0 37.0 41.0 33.0 41.0 19 37.96031687551381 40.0 37.0 41.0 34.0 41.0 20 38.10683206840304 40.0 37.0 41.0 34.0 41.0 21 37.94264686122465 40.0 36.0 41.0 34.0 41.0 22 38.06399059140367 40.0 37.0 41.0 34.0 41.0 23 38.16410140825535 40.0 37.0 41.0 34.0 41.0 24 38.03682529224874 40.0 37.0 41.0 34.0 41.0 25 37.715820514265324 40.0 36.0 41.0 33.0 41.0 26 37.85688299792092 40.0 36.0 41.0 33.0 41.0 27 37.95487861437036 40.0 36.0 41.0 34.0 41.0 28 37.85873957750895 40.0 36.0 41.0 34.0 41.0 29 37.89689842848123 40.0 36.0 41.0 34.0 41.0 30 37.61334743466935 40.0 36.0 41.0 33.0 41.0 31 37.56052810659223 40.0 36.0 41.0 33.0 41.0 32 37.617219522837374 40.0 36.0 41.0 33.0 41.0 33 37.605492008038915 40.0 36.0 41.0 33.0 41.0 34 37.47954222671076 40.0 36.0 41.0 33.0 41.0 35 37.47649512449197 40.0 36.0 41.0 33.0 41.0 36 37.301330813586404 40.0 36.0 41.0 33.0 41.0 37 37.344779110373295 40.0 36.0 41.0 33.0 41.0 38 37.13564589464742 40.0 35.0 41.0 32.0 41.0 39 37.082167733658125 40.0 35.0 41.0 32.0 41.0 40 36.98241522944289 39.0 35.0 41.0 32.0 41.0 41 36.844765384687626 39.0 35.0 41.0 31.0 41.0 42 36.97632391462334 39.0 35.0 41.0 32.0 41.0 43 36.92152230857364 39.0 35.0 41.0 32.0 41.0 44 36.97320168233562 39.0 35.0 41.0 32.0 41.0 45 36.93978613936917 39.0 35.0 41.0 32.0 41.0 46 36.862366048143926 39.0 35.0 41.0 32.0 41.0 47 36.83306965568756 39.0 35.0 41.0 32.0 41.0 48 36.76441811039208 39.0 35.0 41.0 32.0 41.0 49 36.732646760088016 39.0 35.0 41.0 32.0 41.0 50 36.6520278616971 39.0 35.0 41.0 32.0 41.0 51 35.753973586001536 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 17.0 9 28.0 10 49.0 11 32.0 12 38.0 13 41.0 14 61.0 15 83.0 16 91.0 17 144.0 18 224.0 19 352.0 20 532.0 21 925.0 22 1302.0 23 1863.0 24 2736.0 25 3944.0 26 5483.0 27 6628.0 28 7009.0 29 7757.0 30 9362.0 31 12180.0 32 16066.0 33 23094.0 34 41878.0 35 51497.0 36 56105.0 37 85500.0 38 146572.0 39 210476.0 40 64.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.14796867076125 21.80780283558218 22.85153287012756 13.192695623529005 2 35.01725824371905 24.40080158004314 23.648922967117592 16.933017209120212 3 32.62552139545434 23.535360978309082 26.908556592446825 16.930561033789747 4 29.202624351100148 25.46028003288385 26.456764812543256 18.88033080347274 5 24.99273983468495 32.3554865900051 23.52727004780873 19.124503527501215 6 26.305059865661658 34.77424136690492 24.22858034510708 14.692118422326345 7 75.85969748588782 7.332116804140244 11.421359767559125 5.386825942412802 8 76.72773874385415 7.126953923595609 10.457672152606508 5.687635179943739 9 69.7078451684864 9.130326107843436 13.575425532376004 7.586403191294158 10 38.74342070093464 25.73060380013668 20.423386834611268 15.102588664317407 11 29.557324964999506 25.36087717245096 26.108854801028127 18.972943061521413 12 27.52317834866998 22.316231128988214 29.68677985300513 20.47381066933667 13 24.593539103033667 24.014748610454927 30.885682376075117 20.50602991043629 14 20.542728059491456 26.940920314448235 30.490382628772217 22.025968997288093 15 20.231371716129704 26.25405810732908 33.55438911307509 19.960181063466127 16 21.897958918300382 25.738550249735237 31.594505680266654 20.768985151697724 17 21.83106426077069 25.941545916752993 29.225885776288663 23.001504046187655 18 22.701272732263885 25.355386898182864 30.152730761284317 21.790609608268934 19 23.68056428461004 27.05578263137287 27.959510672081812 21.304142411935278 20 24.494136242600774 26.143674698359998 29.338869841490002 20.02331921754923 21 24.043500309911533 26.33987976299353 29.391894332447666 20.22472559464727 22 22.232865648654233 25.424159807435853 28.89343522126528 23.449539322644636 23 22.353362720748756 25.524285072377705 29.848020539405002 22.274331667468537 24 22.40985475334943 24.85432713076822 30.063586044878658 22.672232071003695 25 22.272308934843448 26.35461681497631 28.20628405234254 23.1667901978377 26 20.538104670634112 27.002469178611626 29.35837476323192 23.10105138752234 27 21.569264866723593 26.44824043933753 29.742260519293257 22.24023417464562 28 20.220680129397095 26.299714072295355 30.8281789771619 22.651426821145648 29 21.900415093630848 25.196168944408083 30.002181661617062 22.901234300344008 30 21.50251469009569 26.007284727068352 29.650370665753545 22.83982991708241 31 22.607071184295506 26.1129002662783 27.87412245912274 23.405906090303453 32 23.170980143989667 27.078321652052423 27.977426303904018 21.773271900053892 33 22.484984822281266 27.08164471279364 27.54759562107283 22.885774843852268 34 20.626093539825437 25.995003850416033 29.560214583035343 23.818688026723187 35 22.2803998653438 24.78699903053315 29.09917602541708 23.83342507870597 36 21.94751586761504 26.999290598772202 28.437309014307942 22.615884519304817 37 22.717021150559212 26.800773839709997 28.470973064425483 22.01123194530531 38 21.817483056002242 27.16501019312762 27.883947160444595 23.13355959042554 39 23.540562290773597 25.044175035722905 28.41318070370868 23.002081969794823 40 22.239511770136662 24.811849745641375 30.51523334388044 22.433405140341524 41 20.73849968141961 24.925122772646297 29.88934207731751 24.447035468616583 42 21.41727095803841 25.113670349484853 30.041769428708065 23.42728926376867 43 22.50998001829128 24.624169054213567 29.48176145336229 23.384089474132864 44 21.981324398634367 25.004876230435478 28.297018058667916 24.71678131226224 45 21.612753618162984 24.860973252250652 28.37272605120692 25.153547078379447 46 21.672135268799494 26.114778518001597 28.50694880897169 23.706137404227224 47 21.601195146019624 24.72183814382496 30.43042305452854 23.24654365562688 48 20.721450935008157 24.153450276175246 30.62128232579576 24.503816463020836 49 21.53935732005265 24.678060430581983 30.326541286140092 23.456040963225274 50 20.363860703072962 23.821144202053652 31.087522195878535 24.727472898994847 51 20.36010419962637 23.537239230032377 29.0988870636135 27.003769506727753 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 287.0 1 692.0 2 1097.0 3 4474.5 4 7852.0 5 5122.5 6 2393.0 7 2333.0 8 2273.0 9 2208.0 10 2143.0 11 2063.0 12 1983.0 13 1991.0 14 1999.0 15 1900.0 16 1801.0 17 1841.0 18 1881.0 19 1835.0 20 1789.0 21 2320.5 22 2852.0 23 3004.0 24 3156.0 25 3660.0 26 5643.5 27 7123.0 28 8758.5 29 10394.0 30 11312.5 31 12231.0 32 14062.0 33 15893.0 34 17028.5 35 18164.0 36 19621.5 37 21079.0 38 22960.0 39 24841.0 40 28222.0 41 31603.0 42 34529.5 43 37456.0 44 41302.0 45 45148.0 46 52138.0 47 59128.0 48 61779.0 49 64430.0 50 62800.5 51 61171.0 52 54365.0 53 47559.0 54 42538.0 55 37517.0 56 35486.5 57 33456.0 58 31643.0 59 29830.0 60 28494.0 61 27158.0 62 25244.5 63 23331.0 64 20335.5 65 17340.0 66 14439.5 67 11539.0 68 9551.0 69 7563.0 70 6314.5 71 5066.0 72 4069.0 73 3072.0 74 2541.5 75 1644.5 76 1278.0 77 941.5 78 605.0 79 417.0 80 229.0 81 187.0 82 145.0 83 107.5 84 70.0 85 47.0 86 24.0 87 13.5 88 3.0 89 3.0 90 3.0 91 2.5 92 2.0 93 1.0 94 0.0 95 0.5 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 692133.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.489493198956314 #Duplication Level Percentage of deduplicated Percentage of total 1 74.12508080400457 23.341612278497887 2 9.246703472070887 5.823480121930839 3 3.2215301135512977 3.043330518027197 4 1.6816316208847868 2.118149099560055 5 1.108254435943445 1.7449185261677138 6 0.8455515444028875 1.597559376410504 7 0.709245284060797 1.5633642184177017 8 0.5987702963710553 1.5083978540250722 9 0.5748922899711054 1.629276016965979 >10 7.732579643818262 50.169316190713396 >50 0.10089560417445147 2.0948701762152604 >100 0.047425583526603456 2.823272407488179 >500 0.005579480414894524 1.2958971155254821 >1k 0.0018598268049648413 1.2465561000546779 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4687 0.6771819866990882 No Hit GCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 1655 0.2391158924657544 TruSeq Adapter, Index 19 (95% over 22bp) CTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGCT 1133 0.16369686173033215 TruSeq Adapter, Index 13 (95% over 23bp) GAATCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTC 1039 0.1501156569618845 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 982 0.1418802455597407 No Hit CCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCGTCTTCTGC 967 0.13971303203286073 TruSeq Adapter, Index 19 (95% over 22bp) GAATGATACCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCCG 775 0.11197269888879738 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 773 0.11168373708521338 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGCC 760 0.10980548536191742 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTCTGACTGTCGTATGC 737 0.10648242462070151 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 735 0.10619346281711753 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 721 0.10417073019202956 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 720 0.10402624929023757 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4448090179199663E-4 0.0 0.0 0.16904265509663605 0.0 2 1.4448090179199663E-4 0.0 0.0 0.7120018840309593 0.0 3 1.4448090179199663E-4 0.0 0.0 0.9996633594988247 0.0 4 1.4448090179199663E-4 0.0 0.0 1.4039209227128313 0.0 5 1.4448090179199663E-4 0.0 0.0 2.5152680192968693 0.0 6 1.4448090179199663E-4 0.0 0.0 3.3288399772876023 0.0 7 1.4448090179199663E-4 0.0 0.0 4.036940876970178 0.0 8 1.4448090179199663E-4 0.0 0.0 5.102776489489737 0.0 9 1.4448090179199663E-4 0.0 0.0 5.630131781030524 0.0 10 1.4448090179199663E-4 0.0 0.0 6.671694602049028 0.0 11 1.4448090179199663E-4 0.0 0.0 7.896748168343367 0.0 12 1.4448090179199663E-4 0.0 0.0 8.9468353625676 0.0 13 1.4448090179199663E-4 0.0 0.0 9.40787392018586 0.0 14 1.4448090179199663E-4 0.0 0.0 9.601911771292512 0.0 15 1.4448090179199663E-4 0.0 0.0 9.96065785044204 0.0 16 1.4448090179199663E-4 0.0 0.0 10.580914361835081 0.0 17 1.4448090179199663E-4 0.0 0.0 11.267054164445273 0.0 18 1.4448090179199663E-4 0.0 0.0 12.031213654023142 0.0 19 1.4448090179199663E-4 0.0 0.0 12.513924346910203 0.0 20 1.4448090179199663E-4 0.0 0.0 12.994034383565008 0.0 21 1.4448090179199663E-4 0.0 0.0 13.56430050293802 0.0 22 1.4448090179199663E-4 0.0 0.0 14.161729031847925 0.0 23 1.4448090179199663E-4 0.0 0.0 14.707866840621673 0.0 24 1.4448090179199663E-4 0.0 0.0 15.150411842810557 0.0 25 1.4448090179199663E-4 0.0 0.0 15.57677498399874 0.0 26 1.4448090179199663E-4 0.0 0.0 15.974964349337483 0.0 27 1.4448090179199663E-4 0.0 0.0 16.361595242532864 0.0 28 1.4448090179199663E-4 0.0 0.0 16.77741127789023 0.0 29 1.4448090179199663E-4 0.0 0.0 17.19539452677448 0.0 30 1.4448090179199663E-4 0.0 0.0 17.668424999241477 0.0 31 1.4448090179199663E-4 0.0 0.0 18.10432387994793 0.0 32 1.4448090179199663E-4 0.0 0.0 18.54224549327947 0.0 33 1.4448090179199663E-4 0.0 0.0 18.966152459137188 0.0 34 1.4448090179199663E-4 0.0 0.0 19.391937676718204 0.0 35 2.8896180358399325E-4 0.0 0.0 19.825380382094192 0.0 36 2.8896180358399325E-4 0.0 0.0 20.245530844505318 0.0 37 2.8896180358399325E-4 0.0 0.0 20.682007648818942 0.0 38 2.8896180358399325E-4 0.0 0.0 21.108515270908914 0.0 39 2.8896180358399325E-4 0.0 0.0 21.550626830392424 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 20 7.03134E-4 45.0 1 TTATGCG 25 3.889191E-5 45.0 1 GTATGCG 20 7.03134E-4 45.0 1 ACCACGC 25 3.889191E-5 45.0 40 CGTCCAT 25 3.889191E-5 45.0 16 CGACGGT 65 0.0 41.53846 28 CGGTCTA 60 3.6379788E-12 41.250004 31 CGTTTTT 2090 0.0 41.232056 1 TATGCGG 70 0.0 38.571426 2 TGATTCG 35 6.244687E-6 38.571426 15 CGCGGTA 30 1.1394526E-4 37.500004 30 TCTAGCG 30 1.1394526E-4 37.500004 1 TCTCGAG 30 1.1394526E-4 37.500004 1 TCGAAAG 30 1.1394526E-4 37.500004 1 TCTACTC 175 0.0 37.285713 28 CGGGTAT 115 0.0 37.173912 6 TTGTGCG 55 2.746674E-9 36.81818 1 CGAATAT 110 0.0 36.81818 14 GCACCGA 185 0.0 36.486485 9 CTCACGT 75 1.8189894E-12 36.0 45 >>END_MODULE