##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551262_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 680717 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.57395070198041 31.0 31.0 34.0 30.0 34.0 2 31.74249651470435 33.0 31.0 34.0 30.0 34.0 3 31.695255150084396 33.0 31.0 34.0 30.0 34.0 4 35.418654154369584 37.0 35.0 37.0 33.0 37.0 5 34.24289682790352 37.0 35.0 37.0 32.0 37.0 6 34.724966469178824 37.0 35.0 37.0 32.0 37.0 7 35.43760476086244 37.0 35.0 37.0 33.0 37.0 8 35.2459597747669 37.0 35.0 37.0 32.0 37.0 9 37.17259007781501 39.0 37.0 39.0 34.0 39.0 10 36.7614911923751 39.0 37.0 39.0 32.0 39.0 11 36.88449678794565 39.0 37.0 39.0 33.0 39.0 12 36.91406854831009 39.0 37.0 39.0 33.0 39.0 13 37.041930787684166 39.0 37.0 39.0 33.0 39.0 14 38.10481007525888 40.0 37.0 41.0 33.0 41.0 15 38.19846132827592 40.0 37.0 41.0 33.0 41.0 16 38.24665022322051 40.0 38.0 41.0 34.0 41.0 17 38.13195057564303 40.0 37.0 41.0 33.0 41.0 18 37.96997577554255 39.0 37.0 41.0 33.0 41.0 19 37.84382937402768 39.0 37.0 41.0 34.0 41.0 20 37.818044796883285 39.0 36.0 41.0 34.0 41.0 21 37.71098562251273 39.0 36.0 41.0 33.0 41.0 22 37.8274055150672 40.0 36.0 41.0 33.0 41.0 23 37.88758177039798 40.0 36.0 41.0 34.0 41.0 24 37.782292788339355 40.0 35.0 41.0 33.0 41.0 25 37.467974209546696 39.0 35.0 41.0 33.0 41.0 26 37.59427926730198 39.0 35.0 41.0 33.0 41.0 27 37.63421509966697 40.0 35.0 41.0 33.0 41.0 28 37.492803911170135 39.0 35.0 41.0 33.0 41.0 29 37.47209780275797 40.0 35.0 41.0 33.0 41.0 30 37.180876928297664 39.0 35.0 41.0 32.0 41.0 31 37.034963134459694 39.0 35.0 41.0 32.0 41.0 32 36.94301743602701 39.0 35.0 41.0 32.0 41.0 33 36.75428408575076 40.0 35.0 41.0 31.0 41.0 34 36.463606755817764 40.0 35.0 41.0 30.0 41.0 35 36.36993052913325 40.0 35.0 41.0 30.0 41.0 36 36.15381869411224 39.0 35.0 41.0 29.0 41.0 37 36.126012718941936 39.0 35.0 41.0 29.0 41.0 38 35.91749287883217 39.0 35.0 41.0 27.0 41.0 39 35.88146762898532 39.0 35.0 41.0 27.0 41.0 40 35.756077782690895 39.0 35.0 41.0 26.0 41.0 41 35.57661700824278 39.0 35.0 41.0 26.0 41.0 42 35.70290884464469 39.0 35.0 41.0 26.0 41.0 43 35.652033076888046 39.0 35.0 41.0 26.0 41.0 44 35.71310397713 39.0 35.0 41.0 26.0 41.0 45 35.72157005040274 39.0 35.0 41.0 26.0 41.0 46 35.638636907848635 39.0 35.0 41.0 26.0 41.0 47 35.54271452013098 39.0 35.0 41.0 26.0 41.0 48 35.504460737722134 39.0 35.0 41.0 26.0 41.0 49 35.4924954129249 39.0 35.0 41.0 26.0 41.0 50 35.3729391215439 39.0 35.0 41.0 26.0 41.0 51 34.527214686866934 38.0 34.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 16.0 9 30.0 10 23.0 11 28.0 12 28.0 13 30.0 14 40.0 15 55.0 16 95.0 17 161.0 18 274.0 19 588.0 20 1054.0 21 1616.0 22 2489.0 23 3516.0 24 5078.0 25 7683.0 26 10227.0 27 11599.0 28 10968.0 29 10538.0 30 11428.0 31 13349.0 32 16814.0 33 22921.0 34 37490.0 35 48765.0 36 55352.0 37 80773.0 38 140000.0 39 187643.0 40 44.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.73281113884331 20.371901979824216 23.057893368316055 16.837393513016423 2 36.53309672007604 26.143463436347265 21.682725714210164 15.640714129366536 3 28.977533982550753 25.517065094598784 30.390749753568663 15.114651169281801 4 26.277880528912895 22.741462311063188 33.96418776084628 17.01646939917763 5 25.58317186143434 28.92890878294504 28.228911574119643 17.259007781500976 6 23.441753327741193 33.92393608503975 28.239488656813332 14.394821930405735 7 71.56072200341698 5.594836033182659 18.347272067540548 4.497169895859806 8 72.21165330085778 7.754323749810861 14.926320335763613 5.107702613567753 9 66.32403774255674 7.862738847421174 16.67565229015876 9.13757111986332 10 33.66700111793888 31.254397936293643 22.52360378835845 12.554997157409026 11 25.996412606119723 23.279865200957225 32.814223825760195 17.90949836716286 12 23.196717578670725 20.787493187330416 35.8764361695095 20.139353064489356 13 23.474365999380066 22.2325871103557 37.24117364484801 17.05187324541623 14 18.70689287912598 27.782323638163874 33.883831313159504 19.626952169550634 15 17.589688519605062 25.043446836203593 37.995525306404865 19.37133933778648 16 20.382038350739002 25.953369755713464 32.920435364475985 20.744156529071553 17 20.198702250715055 26.16461760173464 32.17680768953912 21.459872458011187 18 21.263755716399032 24.346681513756817 33.63042204028987 20.75914072955428 19 20.999181745130503 26.132004930095764 31.225310958886 21.64350236588773 20 22.289145121981672 25.94778740651401 33.07159950463996 18.69146796686435 21 22.285619427750444 27.10289297902065 32.90589187577216 17.70559571745674 22 20.5005898192641 23.778016415044725 33.091725342543235 22.629668423147944 23 19.648106334938014 26.326211920666005 32.99447494333181 21.031206801064172 24 20.478848038171517 25.546739687711632 32.65483306572335 21.319579208393503 25 19.861263932001112 28.79037838044297 30.535450120975383 20.81290756658053 26 19.3497444606202 26.834058793889383 31.961299629655205 21.854897115835215 27 22.39976377848651 25.465208008614447 31.248668683167896 20.886359529731152 28 19.147751561955996 26.729022486583997 33.01004675951974 21.11317919194026 29 20.506906688095054 25.174925850243202 32.23777281895413 22.080394642707617 30 22.936403821264932 26.345897046790366 31.428185281108007 19.28951385083669 31 23.6920776181585 26.8002708908401 28.10433704461619 21.403314446385206 32 22.810213348572166 27.789815738405238 28.42164952542687 20.978321387595727 33 22.42106484780019 25.710537565537518 29.57734271363871 22.29105487302359 34 21.17825763129171 28.386098775261964 29.317910379790717 21.1177332136556 35 21.549924564833844 28.331891226456808 28.70693695030387 21.411247258405474 36 24.194048334329832 29.14089114859773 27.76645801412334 18.898602502949096 37 22.834599400338174 28.066288927704168 28.480704903799964 20.618406768157694 38 21.387155014492073 27.740015307389122 28.440453227993423 22.432376450125382 39 22.897180472942498 26.41215071755223 28.725446845017828 21.965221964487444 40 21.32751202041377 26.828182636837333 31.21914099398135 20.625164348767548 41 20.53276177912407 28.882340238307545 28.168534060409833 22.416363922158546 42 22.90290972606825 27.736930324936793 28.972833056909113 20.387326892085845 43 23.959589667953054 25.93794484345183 28.348050658349944 21.754414830245167 44 22.523016172653247 25.30082251508336 28.956379817163374 23.21978149510002 45 21.75940956373941 24.49285092042655 28.81241396938816 24.93532554644588 46 23.37535275305303 26.790722135630517 28.243601966749765 21.590323144566685 47 20.482373732402746 26.040924495788996 31.9617403414341 21.51496143037415 48 21.266399987072454 25.61020218387377 30.163930091359553 22.959467737694226 49 21.977121182517845 23.639192204690055 31.93852952107851 22.44515709171359 50 21.169149587861035 23.442340943446396 32.102033591051786 23.28647587764078 51 20.872697464585137 23.348763142392507 29.620679371897573 26.157860021124783 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 256.0 1 539.0 2 822.0 3 8883.5 4 16945.0 5 11064.0 6 5183.0 7 4990.0 8 4797.0 9 4780.0 10 4763.0 11 4738.5 12 4714.0 13 4680.0 14 4646.0 15 4375.5 16 4105.0 17 3956.5 18 3808.0 19 3592.5 20 3377.0 21 3357.0 22 3337.0 23 3515.0 24 3693.0 25 4232.0 26 5664.5 27 6558.0 28 7248.5 29 7939.0 30 9381.0 31 10823.0 32 11749.5 33 12676.0 34 14642.0 35 16608.0 36 18146.5 37 19685.0 38 21512.5 39 23340.0 40 26525.5 41 29711.0 42 32510.0 43 35309.0 44 39464.5 45 43620.0 46 60631.5 47 77643.0 48 73072.5 49 68502.0 50 66105.0 51 63708.0 52 55433.0 53 47158.0 54 41375.5 55 35593.0 56 31891.5 57 28190.0 58 26255.5 59 24321.0 60 21573.5 61 18826.0 62 17039.0 63 15252.0 64 13277.0 65 11302.0 66 9176.5 67 7051.0 68 5656.0 69 4261.0 70 3482.5 71 2704.0 72 2309.0 73 1914.0 74 1514.5 75 923.0 76 731.0 77 641.0 78 551.0 79 400.0 80 249.0 81 189.5 82 130.0 83 75.5 84 21.0 85 13.0 86 5.0 87 3.5 88 2.0 89 1.5 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 680717.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.50844474831694 #Duplication Level Percentage of deduplicated Percentage of total 1 76.19724671251423 29.342374650027285 2 8.800510552643342 6.777879487468927 3 3.2295357877966473 3.7309320134123825 4 1.8496321346895248 2.849058274536123 5 1.3731440131113692 2.643882018019068 6 1.0165396148715085 2.3487215756252917 7 0.8656777300061356 2.333513212505279 8 0.7267415835671848 2.238855049368104 9 0.645022756284548 2.2354940854611556 >10 5.183583474570455 34.58206727160078 >50 0.07008170585367843 1.8577566154867047 >100 0.03327902220157786 2.202260249945318 >500 0.003915179082538571 1.0099911969866289 >1k 0.004306696990792429 3.2087837954122143 >5k 3.915179082538571E-4 0.9505888187790259 >10k+ 3.915179082538571E-4 1.6878416853657725 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11195 1.6445894549423623 No Hit GAATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTC 6305 0.9262292553293071 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCG 4195 0.6162619708336945 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGC 3837 0.5636703652178512 No Hit GCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 2460 0.3613836587010461 No Hit GAACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCT 1745 0.2563473513956607 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCC 1685 0.24753311581758647 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTT 1573 0.23107987607184777 No Hit CTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGCT 1362 0.20008314762228652 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGGCTAAGT 1193 0.17525638407737723 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCT 1156 0.1698209388042314 No Hit CCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTGC 1063 0.15615887365821626 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTC 1014 0.1489605812694556 No Hit CGCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTTCTG 870 0.12780641588207728 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTA 811 0.11913908423030423 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 764 0.11223459969414602 No Hit CGTTTCTGTCTCTTATACACATCTGACGCAGGCTAAGTCGTATGCCGTCTT 750 0.11017794472592869 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4690392630123825E-4 0.0 0.0 0.2088973832003608 0.0 2 1.4690392630123825E-4 0.0 0.0 0.9147707490778106 0.0 3 1.4690392630123825E-4 0.0 0.0 1.2968678613873312 0.0 4 1.4690392630123825E-4 0.0 0.0 1.9809994461721978 0.0 5 1.4690392630123825E-4 0.0 0.0 4.001222240666826 0.0 6 1.4690392630123825E-4 0.0 0.0 5.180420057086866 0.0 7 1.4690392630123825E-4 0.0 0.0 6.155127608095581 0.0 8 1.4690392630123825E-4 0.0 0.0 7.530295262201473 0.0 9 1.4690392630123825E-4 0.0 0.0 8.106011749376025 0.0 10 1.4690392630123825E-4 0.0 0.0 9.811713237659703 0.0 11 1.4690392630123825E-4 0.0 0.0 11.303081897469873 0.0 12 1.4690392630123825E-4 0.0 0.0 13.112791365574827 0.0 13 1.4690392630123825E-4 0.0 0.0 13.713481520220592 0.0 14 1.4690392630123825E-4 0.0 0.0 13.99803442546609 0.0 15 1.4690392630123825E-4 0.0 0.0 14.461075601167593 0.0 16 1.4690392630123825E-4 0.0 0.0 15.11215380253468 0.0 17 1.4690392630123825E-4 0.0 0.0 15.944070737178592 0.0 18 1.4690392630123825E-4 0.0 0.0 16.813007461250418 0.0 19 1.4690392630123825E-4 0.0 0.0 17.536068586505113 0.0 20 1.4690392630123825E-4 0.0 0.0 18.105908916627616 0.0 21 1.4690392630123825E-4 0.0 0.0 18.67104832110848 0.0 22 1.4690392630123825E-4 0.0 0.0 19.30949278481366 0.0 23 1.4690392630123825E-4 0.0 0.0 19.915324576879968 0.0 24 1.4690392630123825E-4 0.0 0.0 20.415973157714586 0.0 25 1.4690392630123825E-4 0.0 0.0 20.8327395966312 0.0 26 1.4690392630123825E-4 0.0 0.0 21.294752444848594 0.0 27 1.4690392630123825E-4 0.0 0.0 21.754121022392564 0.0 28 1.4690392630123825E-4 0.0 0.0 22.202324901537644 0.0 29 2.938078526024765E-4 0.0 0.0 22.651263300314227 0.0 30 2.938078526024765E-4 0.0 0.0 23.1818802821143 0.0 31 2.938078526024765E-4 0.0 0.0 23.647712632415526 0.0 32 2.938078526024765E-4 0.0 0.0 24.07534996187843 0.0 33 2.938078526024765E-4 0.0 0.0 24.527960958812546 0.0 34 2.938078526024765E-4 0.0 0.0 25.009365125301702 0.0 35 2.938078526024765E-4 0.0 0.0 25.475344379529233 0.0 36 2.938078526024765E-4 0.0 0.0 25.914734023096234 0.0 37 2.938078526024765E-4 0.0 0.0 26.33884565832791 0.0 38 2.938078526024765E-4 0.0 0.0 26.767805123127527 0.0 39 2.938078526024765E-4 0.0 0.0 27.226732988892593 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AACGTTG 20 7.031258E-4 45.0 1 ACGTTAG 20 7.031258E-4 45.0 1 ATTCGGT 20 7.031258E-4 45.0 45 CGTAAGG 70 0.0 45.0 2 TTACCGG 40 6.8084773E-9 45.0 2 TAATGCG 40 6.8084773E-9 45.0 1 CGACGGT 50 2.1827873E-11 44.999996 28 ATTACCG 25 3.8891252E-5 44.999996 1 CGGTCTA 55 1.8189894E-12 44.999996 31 CACGTAT 25 3.8891252E-5 44.999996 45 CGTTTTT 5645 0.0 43.365807 1 ACGGTCT 60 3.6379788E-12 41.249996 30 GTACACG 50 1.0804797E-9 40.499996 1 TGAACCG 50 1.0804797E-9 40.499996 1 AACGGGC 40 3.4554432E-7 39.375 4 CGGATAG 80 0.0 39.375 2 TTACGAG 40 3.4554432E-7 39.375 1 GTACGGG 235 0.0 39.255318 3 CGTTATT 265 0.0 39.056602 1 TCGGCGT 105 0.0 38.571426 4 >>END_MODULE