##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551261_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 824934 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.579428172435613 31.0 31.0 34.0 30.0 34.0 2 31.727792768876057 33.0 31.0 34.0 30.0 34.0 3 31.7020282834748 33.0 31.0 34.0 30.0 34.0 4 35.44061827976541 37.0 35.0 37.0 33.0 37.0 5 34.23111545893369 37.0 35.0 37.0 32.0 37.0 6 34.68848538186085 37.0 35.0 37.0 32.0 37.0 7 35.425980745126274 37.0 35.0 37.0 32.0 37.0 8 35.15030293332558 37.0 35.0 37.0 32.0 37.0 9 37.042617954890936 39.0 37.0 39.0 33.0 39.0 10 36.614244291058434 39.0 35.0 39.0 32.0 39.0 11 36.79706618953759 39.0 37.0 39.0 33.0 39.0 12 36.818792776149365 39.0 37.0 39.0 33.0 39.0 13 36.924164842278294 39.0 37.0 39.0 33.0 39.0 14 37.96345768267522 40.0 37.0 41.0 33.0 41.0 15 38.068558211929684 40.0 37.0 41.0 33.0 41.0 16 38.1266343731741 40.0 37.0 41.0 33.0 41.0 17 38.01620978163101 40.0 37.0 41.0 33.0 41.0 18 37.884262256132004 39.0 37.0 41.0 33.0 41.0 19 37.79127542324598 39.0 37.0 41.0 33.0 41.0 20 37.83843192303869 40.0 36.0 41.0 33.0 41.0 21 37.720662501484966 39.0 36.0 41.0 33.0 41.0 22 37.82551573822875 40.0 36.0 41.0 33.0 41.0 23 37.88525748726565 40.0 36.0 41.0 34.0 41.0 24 37.752537778779875 40.0 36.0 41.0 33.0 41.0 25 37.480183869254994 39.0 35.0 41.0 33.0 41.0 26 37.59339171376134 39.0 35.0 41.0 33.0 41.0 27 37.648221554694075 40.0 36.0 41.0 33.0 41.0 28 37.530863075106616 40.0 35.0 41.0 33.0 41.0 29 37.552148414297385 40.0 35.0 41.0 33.0 41.0 30 37.2574896900843 39.0 35.0 41.0 32.0 41.0 31 37.175228563739644 39.0 35.0 41.0 32.0 41.0 32 37.100912315409474 39.0 35.0 41.0 32.0 41.0 33 37.00608412309349 40.0 35.0 41.0 32.0 41.0 34 36.808387095210044 40.0 35.0 41.0 31.0 41.0 35 36.709970737052906 40.0 35.0 41.0 31.0 41.0 36 36.525011697905526 39.0 35.0 41.0 30.0 41.0 37 36.511807005166474 39.0 35.0 41.0 30.0 41.0 38 36.34662409356385 39.0 35.0 41.0 30.0 41.0 39 36.29586003243896 39.0 35.0 41.0 30.0 41.0 40 36.1562658346001 39.0 35.0 41.0 30.0 41.0 41 36.0092686202775 39.0 35.0 41.0 29.0 41.0 42 36.091121229092266 39.0 35.0 41.0 29.0 41.0 43 36.028338024617724 39.0 35.0 41.0 29.0 41.0 44 36.0913964026213 39.0 35.0 41.0 29.0 41.0 45 36.090187821086296 39.0 35.0 41.0 29.0 41.0 46 36.01458177260241 39.0 35.0 41.0 29.0 41.0 47 35.91316517442608 39.0 35.0 41.0 29.0 41.0 48 35.86932045472729 39.0 35.0 41.0 29.0 41.0 49 35.83636630324365 39.0 35.0 41.0 29.0 41.0 50 35.7127855076891 38.0 35.0 40.0 28.0 41.0 51 34.811266113410284 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 3.0 8 20.0 9 41.0 10 49.0 11 52.0 12 41.0 13 46.0 14 69.0 15 102.0 16 130.0 17 223.0 18 373.0 19 607.0 20 1176.0 21 1914.0 22 2722.0 23 3678.0 24 5048.0 25 7205.0 26 9841.0 27 11315.0 28 11818.0 29 12049.0 30 13375.0 31 16325.0 32 20729.0 33 29394.0 34 49806.0 35 60785.0 36 68545.0 37 101459.0 38 171316.0 39 224618.0 40 60.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.726285981666415 19.471375891889533 21.73616313547508 15.066174990968975 2 35.761527588873776 25.684600222563258 21.857506176251675 16.696366012311287 3 30.908412066904745 25.30238782738983 27.928294869650177 15.860905236055247 4 27.350066793222243 23.844695454424233 29.95827544991478 18.84696230243874 5 25.92874096594394 30.521229577154052 25.143950910012197 18.406078546889812 6 24.774588027648274 34.6342858943867 26.383322787035084 14.20780329092994 7 72.8538283062645 6.417361873798388 15.82344769399734 4.905362125939773 8 72.38712430327759 8.686391881047454 13.176326833419399 5.75015698225555 9 65.76586732999246 8.683240113754556 15.538333975808975 10.012558580444011 10 37.78253775453552 24.315642221074658 22.584230980902714 15.317589043487114 11 29.719468466568234 24.109928794303546 27.34291470590374 18.827688033224476 12 26.12584764356906 21.61288054559516 31.317172040429902 20.944099770405874 13 24.666094499681186 22.008427340853935 33.87664952590146 19.448828633563412 14 20.23422479858995 27.62390688224755 31.415604157423505 20.726264161739 15 19.526046932239428 25.029517512916183 35.571694220386114 19.872741334458272 16 21.479900210198636 24.82562241342944 32.17324052590874 21.52123685046319 17 21.764650262930125 25.425549195450785 31.057757347860555 21.75204319375853 18 22.588716188204145 24.731190616461436 30.817738146324437 21.86235504900998 19 22.89031607377075 26.21955210962332 28.99771375649446 21.892418060111478 20 24.916053890371835 25.78715388140142 30.51868391895594 18.778108309270802 21 23.860333069069767 27.137686166408464 29.83511408185382 19.166866682667948 22 22.028913828257775 24.211876344046917 30.720033360244575 23.03917646745073 23 22.409671561603716 26.03905282119539 30.475771395044937 21.075504222155956 24 21.87520456181949 24.865746835504414 30.48959068240611 22.769457920269986 25 21.671067018694828 27.27284849454623 28.895402541294214 22.160681945464727 26 21.00434701442782 25.94777279152029 30.603660414045248 22.444219780006645 27 23.15979217731358 26.352168779562973 29.207912390567003 21.280126652556447 28 20.388418952304065 26.85620910278883 30.352973692440848 22.402398252466256 29 23.277862228978318 25.799397285116143 29.42611166469075 21.496628821214788 30 22.112314439700633 27.49347220504913 29.274584390993702 21.119628964256535 31 23.362475058610748 26.128393301767172 26.7406847093222 23.768446930299877 32 23.9552497533136 28.755876227673973 26.858997204624856 20.429876814387576 33 22.92013664123433 27.18035624668155 27.820771116234756 22.078735995849367 34 23.93512693136663 26.164153738359673 27.893989094885168 22.006730235388527 35 22.9894755216781 28.429425869221053 26.689650323541038 21.891448285559814 36 23.477029677525717 28.89867553040607 26.400172619870194 21.22412217219802 37 22.621567301141667 29.24088472532348 27.279152029132025 20.858395944402826 38 21.46220182463082 28.209165824175024 26.96652095804028 23.362111393153874 39 24.546084898913126 25.94898500970987 27.651424235150934 21.853505856226075 40 23.63086016578296 25.246019681574527 30.118773138214692 21.00434701442782 41 22.250507313312337 27.093440202488928 27.44995357204334 23.206098912155397 42 22.49464805669302 27.60135962392143 28.487854785958632 21.416137533426916 43 23.9552497533136 25.28420455454618 28.209771933269813 22.550773758870406 44 22.616597206564403 25.287235100020123 28.508704938819346 23.587462754596125 45 22.19547260750557 24.457108083798218 28.123098332715102 25.224320975981108 46 23.747354333801248 26.600794730245088 27.578327478319476 22.073523457634188 47 21.199635364768575 26.260282640793083 30.975811398245195 21.56427059619315 48 21.707069898925248 25.179711346604698 28.896251094026915 24.21696766044314 49 21.525115948669832 24.681489670688805 31.145521944785887 22.647872435855472 50 21.23697168500753 23.93355104772018 30.41613026011778 24.413347007154513 51 21.258427946963028 24.142658685422106 28.366511745182038 26.23240162243283 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 475.0 1 872.5 2 1270.0 3 8053.5 4 14837.0 5 9864.5 6 4892.0 7 4611.0 8 4330.0 9 4209.5 10 4089.0 11 3984.5 12 3880.0 13 3846.0 14 3812.0 15 3606.0 16 3400.0 17 3266.5 18 3133.0 19 3198.0 20 3263.0 21 3492.0 22 3721.0 23 3887.0 24 4053.0 25 4416.0 26 6530.0 27 8281.0 28 8548.5 29 8816.0 30 10458.5 31 12101.0 32 14265.0 33 16429.0 34 18323.5 35 20218.0 36 21939.0 37 23660.0 38 25177.5 39 26695.0 40 30727.5 41 34760.0 42 36922.0 43 39084.0 44 44134.0 45 49184.0 46 66271.0 47 83358.0 48 78883.5 49 74409.0 50 73402.5 51 72396.0 52 64642.5 53 56889.0 54 51746.0 55 46603.0 56 42813.5 57 39024.0 58 37191.0 59 35358.0 60 33864.0 61 32370.0 62 30423.5 63 28477.0 64 24330.5 65 20184.0 66 16570.5 67 12957.0 68 10904.5 69 8852.0 70 7315.5 71 5779.0 72 4888.5 73 3998.0 74 3304.0 75 1892.5 76 1175.0 77 931.5 78 688.0 79 535.5 80 383.0 81 262.0 82 141.0 83 113.5 84 86.0 85 57.0 86 28.0 87 16.5 88 5.0 89 2.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 824934.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 32.84328892679266 #Duplication Level Percentage of deduplicated Percentage of total 1 74.01076584370226 24.307569662979105 2 8.764458891079926 5.757073112934696 3 3.2000334440936835 3.1529886893930477 4 1.8891753265622195 2.481869243346034 5 1.2917145331917386 2.1212076812276686 6 1.0678569061574 2.104315974083904 7 0.9199137180526546 2.114909442080639 8 0.8150917478121985 2.1416235020192365 9 0.7064518171707421 2.088198102977675 >10 7.199030537413731 43.61351530645682 >50 0.08426500413266341 1.8830490791004544 >100 0.041752928662121054 2.5796712106374358 >500 0.005314009102451759 1.1566321699267432 >1k 0.003416148708718988 2.533420883514904 >5k 7.591441574931083E-4 1.9639559393216117 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8866 1.074752646878417 No Hit GAATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTC 6888 0.8349758889802094 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCG 4618 0.5598023599463714 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGC 4465 0.5412554216458529 No Hit GCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 3101 0.3759088605876349 No Hit GAACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCT 2119 0.2568690343712346 No Hit CTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGCT 1353 0.16401312104968396 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCC 1211 0.1467996227576994 No Hit GAATGACTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCT 1206 0.14619351366291122 No Hit CCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTTCTGC 1200 0.1454661827491654 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTC 1049 0.12716168808656209 No Hit GAATGCTGTCTCTTATACACATCTGACGCGACATGAGTCGTATGCCGTCTT 974 0.11807005166473925 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGACATGAGT 955 0.11576683710454412 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 874 0.10594786976897545 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.4244363791527565E-4 0.0 0.0 0.16934688108382004 0.0 2 2.4244363791527565E-4 0.0 0.0 0.8314604562304378 0.0 3 2.4244363791527565E-4 0.0 0.0 1.1146346253154797 0.0 4 2.4244363791527565E-4 0.0 0.0 1.7276533637842542 0.0 5 2.4244363791527565E-4 0.0 0.0 3.469853345843425 0.0 6 2.4244363791527565E-4 0.0 0.0 4.398170035421016 0.0 7 2.4244363791527565E-4 0.0 0.0 5.231206375297902 0.0 8 2.4244363791527565E-4 0.0 0.0 6.459062179519816 0.0 9 2.4244363791527565E-4 0.0 0.0 6.999832713889838 0.0 10 2.4244363791527565E-4 0.0 0.0 8.5197118799807 0.0 11 2.4244363791527565E-4 0.0 0.0 9.689017545646076 0.0 12 2.4244363791527565E-4 0.0 0.0 11.127556871216363 0.0 13 2.4244363791527565E-4 0.0 0.0 11.582017470488548 0.0 14 2.4244363791527565E-4 0.0 0.0 11.790397777276727 0.0 15 2.4244363791527565E-4 0.0 0.0 12.211886041792434 0.0 16 2.4244363791527565E-4 0.0 0.0 12.80017552919385 0.0 17 2.4244363791527565E-4 0.0 0.0 13.457803897039035 0.0 18 2.4244363791527565E-4 0.0 0.0 14.154950577864412 0.0 19 2.4244363791527565E-4 0.0 0.0 14.706509854121663 0.0 20 2.4244363791527565E-4 0.0 0.0 15.15515180608388 0.0 21 2.4244363791527565E-4 0.0 0.0 15.681254500360028 0.0 22 2.4244363791527565E-4 0.0 0.0 16.225904132936694 0.0 23 2.4244363791527565E-4 0.0 0.0 16.715882725163468 0.0 24 2.4244363791527565E-4 0.0 0.0 17.14221986243748 0.0 25 2.4244363791527565E-4 0.0 0.0 17.52552325398153 0.0 26 2.4244363791527565E-4 0.0 0.0 17.87767263805347 0.0 27 2.4244363791527565E-4 0.0 0.0 18.24655063314156 0.0 28 2.4244363791527565E-4 0.0 0.0 18.611185864566135 0.0 29 2.4244363791527565E-4 0.0 0.0 18.988913052438136 0.0 30 2.4244363791527565E-4 0.0 0.0 19.428220924340614 0.0 31 2.4244363791527565E-4 0.0 0.0 19.84292076699469 0.0 32 2.4244363791527565E-4 0.0 0.0 20.25822671874356 0.0 33 2.4244363791527565E-4 0.0 0.0 20.672562895940768 0.0 34 2.4244363791527565E-4 0.0 0.0 21.081201647646964 0.0 35 2.4244363791527565E-4 0.0 0.0 21.4888706248015 0.0 36 2.4244363791527565E-4 0.0 0.0 21.893630278301053 0.0 37 2.4244363791527565E-4 0.0 0.0 22.29705649179207 0.0 38 2.4244363791527565E-4 0.0 0.0 22.702179810748497 0.0 39 2.4244363791527565E-4 0.0 0.0 23.11857675886798 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGTC 20 7.032127E-4 45.0 23 ATATGCG 25 3.8898455E-5 45.0 1 ACGATAG 25 3.8898455E-5 45.0 1 GTTAACG 20 7.032127E-4 45.0 1 AATTGCG 30 2.1647538E-6 44.999996 1 CGTTTTT 4390 0.0 43.05239 1 TACGGGA 190 0.0 40.263157 4 TATTACG 45 1.9272193E-8 40.000004 1 TCTAGCG 40 3.4566438E-7 39.375 1 TGCGTAG 40 3.4566438E-7 39.375 1 CGAACAC 75 0.0 39.000004 34 TGCAACG 35 6.246146E-6 38.571426 1 CGCGCAA 65 9.094947E-12 38.076927 18 CCTCGAC 30 1.13964285E-4 37.499996 26 ATCGTCA 30 1.13964285E-4 37.499996 24 GGCGAAC 120 0.0 37.499996 32 TATCGAG 30 1.13964285E-4 37.499996 1 CTAGCGA 30 1.13964285E-4 37.499996 17 TTACACG 410 0.0 37.317074 34 CGTTATT 195 0.0 36.923077 1 >>END_MODULE