SRR3551255_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551255_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	622350
Sequences flagged as poor quality	0
Sequence length	51
%GC	44

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	11835	1.9016630513376716	No Hit
GAATCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC	2059	0.33084277335904233	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCC	1540	0.24744918454246	No Hit
GCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	1357	0.21804450871695993	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCG	1302	0.20920703784044348	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGC	1218	0.19570980959267292	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTT	1205	0.19362095284004177	No Hit
CGTTCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTC	1118	0.17964168072627942	No Hit
CCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	1098	0.17642805495300073	No Hit
CGCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTG	960	0.15425403711737767	No Hit
CTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGCT	932	0.1497549610347875	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCT	808	0.12983048124045957	No Hit
GAACTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCT	716	0.11504780268337751	No Hit
TCTGTCTCTTATACACATCTGACGCACCGATCATCGTATGCCGTCTTCTGC	693	0.111352133044107	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGGT	20	7.0307904E-4	45.0	28
GCTTGCG	20	7.0307904E-4	45.0	1
CGTAGAC	20	7.0307904E-4	45.0	14
GACGCGA	20	7.0307904E-4	45.0	1
TTACCGG	20	7.0307904E-4	45.0	2
TCGACGG	20	7.0307904E-4	45.0	2
ATTGACG	35	1.2107193E-7	45.0	1
CTGGCGT	20	7.0307904E-4	45.0	35
CCGTTGG	20	7.0307904E-4	45.0	2
GGTCGAT	30	2.1638916E-6	44.999996	8
TCTACGG	30	2.1638916E-6	44.999996	2
TTACGCG	25	3.888738E-5	44.999996	1
CGTTTTT	5860	0.0	43.31058	1
CGTTATT	210	0.0	41.785713	1
GCTACGA	60	3.6379788E-12	41.249996	10
CGTTCTG	180	0.0	40.000004	1
ACGCCGG	40	3.4548066E-7	39.375	27
ACTCGAG	40	3.4548066E-7	39.375	1
CCAACGG	40	3.4548066E-7	39.375	2
CGCCGGT	40	3.4548066E-7	39.375	28