##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551251_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 544724 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.56554879168166 31.0 31.0 34.0 30.0 34.0 2 31.718060889551406 31.0 31.0 34.0 30.0 34.0 3 31.715356767831047 31.0 31.0 34.0 30.0 34.0 4 35.45224003348485 37.0 35.0 37.0 33.0 37.0 5 34.418960794824535 37.0 35.0 37.0 32.0 37.0 6 34.77782142883368 37.0 35.0 37.0 32.0 37.0 7 35.42635536528591 37.0 35.0 37.0 33.0 37.0 8 34.9539748569918 37.0 35.0 37.0 32.0 37.0 9 36.661547866442454 39.0 37.0 39.0 32.0 39.0 10 36.50622333512017 38.0 35.0 39.0 32.0 39.0 11 36.71303999823764 39.0 35.0 39.0 33.0 39.0 12 36.66093104030665 39.0 35.0 39.0 32.0 39.0 13 36.65220184900977 39.0 35.0 39.0 32.0 39.0 14 37.712678347199684 40.0 37.0 41.0 33.0 41.0 15 37.76018130282492 40.0 36.0 41.0 33.0 41.0 16 37.961817360718456 40.0 37.0 41.0 33.0 41.0 17 37.736696014862574 40.0 36.0 41.0 33.0 41.0 18 37.70537373054978 39.0 36.0 41.0 33.0 41.0 19 37.589816127066186 39.0 36.0 41.0 33.0 41.0 20 37.33568375911471 39.0 35.0 41.0 32.0 41.0 21 37.42343278430912 39.0 35.0 41.0 32.0 41.0 22 37.45747938405504 39.0 35.0 41.0 33.0 41.0 23 37.37272086414404 39.0 35.0 41.0 32.0 41.0 24 37.34825893480001 39.0 35.0 41.0 32.0 41.0 25 37.24330303052555 39.0 35.0 41.0 32.0 41.0 26 37.16440435890469 39.0 35.0 41.0 32.0 41.0 27 37.04106850441691 39.0 35.0 41.0 32.0 41.0 28 36.90907872610717 39.0 35.0 41.0 31.0 41.0 29 36.90907321873095 39.0 35.0 41.0 31.0 41.0 30 36.689049867455815 39.0 35.0 41.0 31.0 41.0 31 36.58790506752043 39.0 35.0 41.0 30.0 41.0 32 36.291955191987135 39.0 35.0 41.0 30.0 41.0 33 36.21979754885043 39.0 35.0 41.0 29.0 41.0 34 35.872612552411866 39.0 35.0 41.0 27.0 41.0 35 35.84912542865745 39.0 35.0 41.0 27.0 41.0 36 35.63862249506172 39.0 35.0 41.0 25.0 41.0 37 35.439940226610176 39.0 35.0 41.0 25.0 41.0 38 35.32991386463603 39.0 35.0 41.0 24.0 41.0 39 35.22466606942231 39.0 35.0 40.0 24.0 41.0 40 35.23737158634464 38.0 35.0 40.0 24.0 41.0 41 35.12698540912462 38.0 35.0 40.0 24.0 41.0 42 35.13901535456488 38.0 35.0 40.0 24.0 41.0 43 34.992967080576584 38.0 35.0 40.0 23.0 41.0 44 35.213774315065976 38.0 35.0 40.0 23.0 41.0 45 35.20444114817779 38.0 35.0 40.0 24.0 41.0 46 35.164123482717855 38.0 35.0 40.0 23.0 41.0 47 34.9477533576637 38.0 35.0 40.0 23.0 41.0 48 35.055811750537885 38.0 35.0 40.0 23.0 41.0 49 35.047350584883354 38.0 35.0 40.0 24.0 41.0 50 34.80814320646786 38.0 35.0 40.0 23.0 41.0 51 33.971815084336285 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 30.0 10 38.0 11 38.0 12 32.0 13 23.0 14 57.0 15 53.0 16 81.0 17 135.0 18 240.0 19 540.0 20 1459.0 21 2932.0 22 4535.0 23 5387.0 24 6287.0 25 7464.0 26 8272.0 27 8311.0 28 8061.0 29 7903.0 30 9023.0 31 11436.0 32 14849.0 33 20301.0 34 34576.0 35 43599.0 36 43449.0 37 64125.0 38 104570.0 39 136858.0 40 51.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 48.307950448300424 17.29462994103436 19.814988875100052 14.582430735565167 2 31.3162261989558 33.02553219612134 20.365726496354117 15.292515108568743 3 27.916706442161537 32.11130774483959 25.360733141921415 14.611252671077462 4 25.746065897592175 20.77657676180965 36.81644282242016 16.660914518178014 5 31.545883787018745 27.0406664659534 23.302259492880797 18.111190254147054 6 22.684331881833735 39.0113158223247 25.35192133998135 12.952430955860214 7 67.00659416511849 5.670210969224781 22.40492432865084 4.918270537005896 8 66.16268055015017 15.356400672634216 13.035225178255411 5.445693598960207 9 60.983911118291104 7.386676555466622 14.06418663396509 17.56522569227719 10 42.84720335435927 21.412495135151012 20.834587791248413 14.905713719241303 11 34.16886349784478 21.659225589472832 25.848319515938346 18.32359139674404 12 26.594385413530524 18.202061961653975 30.19235429318334 25.011198331632166 13 27.615269384128478 21.529067931649788 33.26877464550855 17.586888038713184 14 19.377336045410154 31.28905647630727 28.31709269281324 21.01651478546934 15 17.003106160183872 22.42144645728846 37.80428253574287 22.771164846784796 16 18.915083601970906 22.294226066778773 30.66378569697682 28.126904634273505 17 18.82604768653483 26.79467032845992 31.24940336757697 23.129878617428275 18 19.84858386999655 22.62852380287999 30.653505261380076 26.869387065743382 19 21.157320037303297 24.012527445091457 28.13149411445062 26.698658403154624 20 27.426182800831246 22.998435905155638 31.707066330839105 17.86831496317401 21 22.895631549188213 29.66107606788025 28.149484876744918 19.29380750618662 22 19.99930239901308 22.07888765686843 33.14614373517598 24.77566620894251 23 23.919636366306605 26.00638121323826 28.870951160587747 21.203031259867384 24 22.23144197795581 25.15420653395114 28.62311923102342 23.991232257069637 25 19.711266623097202 31.24022440722274 27.063430287631903 21.985078682048158 26 19.181273452243705 24.116249697094307 33.012498072418325 23.689978778243663 27 26.17417260851367 25.56725974989169 27.135026178394927 21.123541463199714 28 18.39757381719917 28.298551192897687 32.0476057599812 21.25626922992194 29 21.555870495884154 24.722244659680868 32.36960368920774 21.352281155227235 30 22.37867250203773 29.026993486609733 28.82285340833156 19.77148060302098 31 22.66285311460483 23.448939279341467 28.112952614535068 25.775254991518644 32 28.112218297706725 25.924137728464324 27.538900433981244 18.4247435398477 33 28.01712426843686 22.793928668463295 25.95094029269869 23.238006770401157 34 22.08310997863138 25.248015508771417 29.858974453117543 22.809900059479663 35 28.343895257047606 22.712970238138947 26.722340120868548 22.2207943839449 36 24.48249021522826 29.171470322585378 26.675527423061958 19.6705120391244 37 24.285142567612223 24.23612691932061 31.360652367070298 20.118078145996872 38 24.22474500848136 23.918718470271184 27.13135459425324 24.72518192699422 39 22.93822192523186 25.20212070700024 31.047833398197987 20.81182396956991 40 26.357935394805445 21.7746969107291 28.641844310146052 23.2255233843194 41 22.865157400812155 24.21813615702631 28.26385472275868 24.652851719402854 42 25.26949427600032 23.540178145262555 29.10134306547903 22.08898451325809 43 27.28317459851227 24.420624022440723 25.87016544158142 22.42603593746558 44 23.472070259434137 22.938038346024776 30.477085643371687 23.1128057511694 45 22.04676129562861 21.784977346325846 29.073989763623416 27.094271594422132 46 26.518016463383294 25.537336339136885 27.445825775989306 20.498821421490515 47 20.875893112842466 25.594613051747306 33.499166550399835 20.03032728501039 48 23.152458859899692 23.59249821928169 29.067380912168368 24.18766200865025 49 22.236398616547095 21.213862433085378 33.80188866288249 22.74785028748504 50 23.777913218437227 22.338101497272014 30.13085525880997 23.753130025480797 51 21.547976589979513 22.444393858174045 28.486352721745323 27.521276830101115 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 139.0 1 524.5 2 910.0 3 4820.0 4 8730.0 5 5867.0 6 3004.0 7 2852.5 8 2701.0 9 2598.0 10 2495.0 11 2474.5 12 2454.0 13 2405.5 14 2357.0 15 2191.0 16 2025.0 17 2027.0 18 2029.0 19 2033.0 20 2037.0 21 1984.5 22 1932.0 23 2057.0 24 2182.0 25 2527.0 26 3394.0 27 3916.0 28 4130.5 29 4345.0 30 5554.5 31 6764.0 32 7906.0 33 9048.0 34 10138.5 35 11229.0 36 12299.5 37 13370.0 38 14289.5 39 15209.0 40 17678.0 41 20147.0 42 22219.0 43 24291.0 44 27363.0 45 30435.0 46 52132.5 47 73830.0 48 60647.0 49 47464.0 50 47157.5 51 46851.0 52 42085.5 53 37320.0 54 34318.0 55 31316.0 56 29835.5 57 28355.0 58 25982.5 59 23610.0 60 22499.5 61 21389.0 62 20241.0 63 19093.0 64 16503.5 65 13914.0 66 11632.5 67 9351.0 68 8078.5 69 6806.0 70 5560.0 71 4314.0 72 3693.0 73 3072.0 74 2327.5 75 1265.0 76 947.0 77 721.0 78 495.0 79 349.5 80 204.0 81 156.5 82 109.0 83 68.0 84 27.0 85 31.0 86 35.0 87 26.0 88 17.0 89 9.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 544724.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 30.007355879028463 #Duplication Level Percentage of deduplicated Percentage of total 1 76.25202952476494 22.88121786447807 2 8.500273312029222 5.101414526861377 3 2.828347599247448 2.5461369888064187 4 1.5119922005865223 1.8148355219726064 5 1.0367324877961088 1.5554800356324183 6 0.7579893975206315 1.364715456235918 7 0.6567855299013085 1.3795877992361396 8 0.5467350106119678 1.3124857627966178 9 0.48610778354868406 1.312812833085999 >10 7.2422401225644 46.34033384008334 >50 0.12277351281343861 2.3898571114029923 >100 0.048739233729958045 2.8010332400284508 >500 0.0024678093027826857 0.5329923792493 >1k 0.0043186662798697 2.5262987173448934 >5k 0.0024678093027826857 6.14079792278544 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCG 9676 1.7763124077514485 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGC 9541 1.7515292147950154 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTC 8930 1.6393623192662705 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5023 0.9221183571863917 No Hit GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 3438 0.63114531395716 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCAGTTGTGGT 2889 0.5303603292676659 No Hit GAATGACTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCT 1946 0.3572451369868043 No Hit GAACTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCT 1486 0.2727987017278475 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTA 1421 0.2608660532673427 No Hit GAATGATCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTC 1236 0.22690389995667531 No Hit CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 1230 0.22580242471416717 No Hit GAATGATACGGCGACCACCGATGAATGATACGGCGAGCTCCGGTCGAATGC 872 0.1600810685778486 No Hit GAATGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTT 749 0.13750082610643188 No Hit CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGCT 744 0.1365829300710084 Illumina Single End Adapter 2 (95% over 21bp) >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.6715841416937753E-4 0.0 0.0 0.1420903062835491 0.0 2 3.6715841416937753E-4 0.0 0.0 1.159669851153979 0.0 3 3.6715841416937753E-4 0.0 0.0 1.4029123005411914 0.0 4 3.6715841416937753E-4 0.0 0.0 1.9396979020568215 0.0 5 3.6715841416937753E-4 0.0 0.0 4.346421306937091 0.0 6 3.6715841416937753E-4 0.0 0.0 4.973711457545472 0.0 7 3.6715841416937753E-4 0.0 0.0 5.797614938941556 0.0 8 3.6715841416937753E-4 0.0 0.0 6.676225024048876 0.0 9 3.6715841416937753E-4 0.0 0.0 6.972521864283563 0.0 10 3.6715841416937753E-4 0.0 0.0 9.429362392697954 0.0 11 3.6715841416937753E-4 0.0 0.0 10.260241883963255 0.0 12 3.6715841416937753E-4 0.0 0.0 12.826679199007204 0.0 13 3.6715841416937753E-4 0.0 0.0 13.2415682070186 0.0 14 5.507376212540662E-4 0.0 0.0 13.441302384326741 0.0 15 5.507376212540662E-4 0.0 0.0 13.954406268128446 0.0 16 5.507376212540662E-4 0.0 0.0 14.48935607757323 0.0 17 5.507376212540662E-4 0.0 0.0 15.053678560151562 0.0 18 5.507376212540662E-4 0.0 0.0 15.663895844501068 0.0 19 5.507376212540662E-4 0.0 0.0 16.620710671826465 0.0 20 7.343168283387551E-4 0.0 0.0 17.066624565835177 0.0 21 7.343168283387551E-4 0.0 0.0 17.456179643268886 0.0 22 7.343168283387551E-4 0.0 0.0 17.921369354021486 0.0 23 7.343168283387551E-4 0.0 0.0 18.33460614916912 0.0 24 7.343168283387551E-4 0.0 0.0 18.690199073292163 0.0 25 7.343168283387551E-4 0.0 0.0 19.004303096614066 0.0 26 7.343168283387551E-4 0.0 0.0 19.283894229004048 0.0 27 9.178960354234438E-4 0.0 0.0 19.67748804899362 0.0 28 9.178960354234438E-4 0.0 0.0 19.9546926516915 0.0 29 9.178960354234438E-4 0.0 0.0 20.2460328533349 0.0 30 9.178960354234438E-4 0.0 0.0 20.61961653975224 0.0 31 0.0011014752425081325 0.0 0.0 20.93041613734662 0.0 32 0.0011014752425081325 0.0 0.0 21.24158289335517 0.0 33 0.0011014752425081325 0.0 0.0 21.538981208832364 0.0 34 0.0012850544495928214 0.0 0.0 21.836563103516642 0.0 35 0.0012850544495928214 0.0 0.0 22.146444805075596 0.0 36 0.0012850544495928214 0.0 0.0 22.458345877912485 0.0 37 0.0012850544495928214 0.0 0.0 22.757947143874695 0.0 38 0.0012850544495928214 0.0 0.0 23.048002291068503 0.0 39 0.0012850544495928214 0.0 0.0 23.351458720379494 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTCCGAT 45 3.8380676E-10 45.000004 38 CCGCGTA 45 3.8380676E-10 45.000004 40 CCGATCG 40 6.8030204E-9 45.0 40 GCGAACC 40 6.8030204E-9 45.0 33 TCGATAG 25 3.888095E-5 45.0 1 ACGGGCC 25 3.888095E-5 45.0 5 TACGCGG 20 7.0300145E-4 45.0 2 TACGATG 20 7.0300145E-4 45.0 1 CGATCGA 40 6.8030204E-9 45.0 41 TCGAATA 20 7.0300145E-4 45.0 44 GGTCGAA 330 0.0 44.31818 42 CGGTCGA 325 0.0 44.307693 41 GATGAAT 2225 0.0 43.280903 20 GTCGAAT 335 0.0 42.985077 43 ATGAATG 2215 0.0 42.9684 21 CGATGAA 2130 0.0 42.887325 19 CCGATGA 2095 0.0 42.74463 18 CGTTTTT 2465 0.0 42.5355 1 ACAACGA 75 0.0 42.0 13 CGTAAGC 75 0.0 42.0 43 >>END_MODULE