##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551241_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 800831 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.564908201605583 31.0 31.0 34.0 30.0 34.0 2 31.712004155683285 31.0 31.0 34.0 30.0 34.0 3 31.698390796560073 33.0 31.0 34.0 30.0 34.0 4 35.437430618944575 37.0 35.0 37.0 33.0 37.0 5 34.207721729053944 37.0 35.0 37.0 32.0 37.0 6 34.69851566685106 37.0 35.0 37.0 32.0 37.0 7 35.454381760945815 37.0 35.0 37.0 33.0 37.0 8 35.23906791819997 37.0 35.0 37.0 32.0 37.0 9 37.13747095204856 39.0 37.0 39.0 34.0 39.0 10 36.69301762793898 39.0 35.0 39.0 32.0 39.0 11 36.82857431842673 39.0 37.0 39.0 33.0 39.0 12 36.831456324742675 39.0 37.0 39.0 33.0 39.0 13 36.91610214889284 39.0 37.0 39.0 33.0 39.0 14 37.923034947448336 40.0 37.0 41.0 33.0 41.0 15 38.04208503417075 40.0 37.0 41.0 33.0 41.0 16 38.14660396513122 40.0 37.0 41.0 34.0 41.0 17 38.036194902544985 40.0 37.0 41.0 33.0 41.0 18 37.94701129202041 39.0 37.0 41.0 33.0 41.0 19 37.84748592399645 39.0 37.0 41.0 33.0 41.0 20 37.860303859366084 40.0 36.0 41.0 34.0 41.0 21 37.763187239255224 39.0 36.0 41.0 33.0 41.0 22 37.88079007930512 40.0 36.0 41.0 33.0 41.0 23 37.90562678018208 40.0 36.0 41.0 34.0 41.0 24 37.81337760401383 40.0 36.0 41.0 33.0 41.0 25 37.543230719090545 39.0 35.0 41.0 33.0 41.0 26 37.64842769573106 39.0 36.0 41.0 33.0 41.0 27 37.67413224513037 40.0 36.0 41.0 33.0 41.0 28 37.55646572123207 40.0 36.0 41.0 33.0 41.0 29 37.5867729895571 40.0 36.0 41.0 33.0 41.0 30 37.30822483145632 39.0 35.0 41.0 33.0 41.0 31 37.18248794065165 39.0 35.0 41.0 32.0 41.0 32 37.12373522004018 39.0 35.0 41.0 32.0 41.0 33 37.04793021249177 40.0 35.0 41.0 32.0 41.0 34 36.836353737555115 40.0 35.0 41.0 31.0 41.0 35 36.790913438665584 40.0 35.0 41.0 31.0 41.0 36 36.595607562644304 40.0 35.0 41.0 30.0 41.0 37 36.57220187530203 40.0 35.0 41.0 31.0 41.0 38 36.41000285952966 39.0 35.0 41.0 30.0 41.0 39 36.34008673490412 39.0 35.0 41.0 30.0 41.0 40 36.246647544862775 39.0 35.0 41.0 29.0 41.0 41 36.03453537637779 39.0 35.0 41.0 28.0 41.0 42 36.19068442655192 39.0 35.0 41.0 29.0 41.0 43 36.09946543028429 39.0 35.0 41.0 29.0 41.0 44 36.20056416397467 39.0 35.0 41.0 30.0 41.0 45 36.146316763461954 39.0 35.0 41.0 29.0 41.0 46 36.05448964887723 39.0 35.0 41.0 29.0 41.0 47 35.91674897700014 39.0 35.0 41.0 29.0 41.0 48 35.887669183635495 39.0 35.0 41.0 29.0 41.0 49 35.83768984966866 39.0 35.0 40.0 29.0 41.0 50 35.67938054346048 38.0 35.0 40.0 28.0 41.0 51 34.76179118940201 37.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 18.0 9 37.0 10 30.0 11 50.0 12 41.0 13 34.0 14 45.0 15 56.0 16 97.0 17 161.0 18 239.0 19 526.0 20 1076.0 21 1905.0 22 2879.0 23 3997.0 24 5219.0 25 7074.0 26 9168.0 27 10400.0 28 10956.0 29 11162.0 30 12628.0 31 15648.0 32 20115.0 33 28264.0 34 47123.0 35 60022.0 36 64627.0 37 98773.0 38 168922.0 39 219475.0 40 62.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.31958802793598 19.39048313564285 22.388244211325485 13.901684625095681 2 34.302118674227145 26.86496901343729 22.88235595275408 15.950556359581485 3 30.854949421288637 26.203655952379467 27.294023333262572 15.647371293069323 4 27.416645959010076 23.878446263943328 31.089081216885962 17.615826560160635 5 26.768694019087675 30.16379236068534 25.170229424185624 17.897284196041362 6 24.319737872285163 35.96763861538827 25.745381984463638 13.967241527862933 7 73.80908081730104 6.076937581087645 15.760878387574905 4.35310321403642 8 74.76571211653894 8.614801375071645 11.454102051494012 5.1653844568954 9 68.53343589346566 7.921396649230612 13.727615439462259 9.817552017841468 10 36.68239616098777 29.773073220192526 20.066031409872995 13.478499208946706 11 28.600790928423102 23.956115584936146 30.076133416413704 17.36696007022705 12 25.279615799088695 21.518397764322312 32.44791972338733 20.75406671320166 13 24.243442124493182 23.35861124257178 34.83931066604565 17.558635966889394 14 19.338412224302008 29.081666419007256 31.624649894921653 19.955271461769087 15 17.477095666876032 26.024342214524665 37.412013271214526 19.08654884738478 16 20.32913311297889 24.614431759010326 32.88059528165119 22.175839846359594 17 20.739456889156386 25.06633734208591 31.856908636154195 22.33729713260351 18 21.18474434680975 24.339966859424774 32.707400188054656 21.767888605710816 19 21.81471496483028 25.825298970694195 30.473345812037746 21.88664025243778 20 24.484941267258638 25.080697425549207 32.457659606084185 17.976701701107974 21 23.018714310509957 27.45473139776058 30.812368652062673 18.7141856396668 22 20.631818698327113 24.090975499200205 32.07380833159556 23.20339747087713 23 20.545783067838283 27.231837928351926 30.779527765533555 21.44285123827624 24 21.147408129805164 25.61264486514633 31.24704213498229 21.99290487006622 25 19.763345824524777 28.72828349551903 29.625726276829944 21.882644403126253 26 19.569547132915684 26.61235641477415 31.954557203704653 21.86353924860551 27 22.76660119301076 26.194540421137543 29.822147244549726 21.21671114130197 28 18.431479300876212 27.818853166273534 31.974161839389335 21.775505693460918 29 22.352531308103707 24.897512708673865 31.044627393295215 21.705328589927213 30 23.376967175346607 26.173562212252023 29.74272973948311 20.706740872918257 31 22.577672442750092 26.705135040976185 26.67004648920933 24.047146027064386 32 23.939632706526094 28.421227449986326 26.68253351830786 20.95660632517972 33 23.8110163068113 25.718659742192795 27.720455376977167 22.749868574018738 34 22.322437567976262 26.283572938610018 28.509885356585844 22.884104136827872 35 22.82928607908535 25.45468394705 27.76490920056791 23.95112077329674 36 23.694512325322073 26.48523845855118 27.97556538146001 21.84468383466674 37 22.40098098100598 28.159624190372252 28.141018517015446 21.29837631160632 38 21.123058423063043 27.321994278443267 26.4842394962233 25.07070780227039 39 22.295340714832466 27.78251591159683 28.313838999739023 21.608304373831682 40 22.813427552130225 24.896388876055 29.378108489806216 22.912075082008563 41 20.153315743271676 26.519452918281132 28.97665050428867 24.350580834158517 42 21.5286371281831 25.01276798725324 29.661938661215665 23.796656223348 43 22.82766276530254 24.984921912363532 29.28932571291571 22.898089609418218 44 22.158857486785603 25.69630796010644 28.940937601066892 23.203896952041067 45 21.28963539123735 24.58209035364515 28.425597910170808 25.702676344946685 46 23.297175059407042 26.91941246030686 27.600954508504287 22.182457971781812 47 20.304408795363816 26.077786699066348 32.02211203112766 21.595692474442174 48 20.999436834987655 25.545589518887258 29.241625261759346 24.21334838436574 49 20.955732233142825 23.92714567742757 31.924962944741146 23.192159144688453 50 21.33271564162726 24.083108670868135 30.320005094707874 24.264170592796734 51 20.249590737621297 24.032785943601084 28.438834161015247 27.278789157762372 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 305.0 1 676.0 2 1047.0 3 6700.5 4 12354.0 5 8289.0 6 4224.0 7 4120.0 8 4016.0 9 3930.0 10 3844.0 11 3657.0 12 3470.0 13 3469.5 14 3469.0 15 3238.5 16 3008.0 17 3094.5 18 3181.0 19 3043.0 20 2905.0 21 3028.5 22 3152.0 23 3651.5 24 4151.0 25 4974.5 26 6962.0 27 8126.0 28 10142.5 29 12159.0 30 13344.0 31 14529.0 32 15932.0 33 17335.0 34 19756.5 35 22178.0 36 23765.0 37 25352.0 38 27584.0 39 29816.0 40 32492.0 41 35168.0 42 38438.5 43 41709.0 44 45007.5 45 48306.0 46 50887.0 47 53468.0 48 71140.5 49 88813.0 50 81764.0 51 74715.0 52 72812.0 53 70909.0 54 60127.0 55 49345.0 56 43191.5 57 37038.0 58 33584.5 59 30131.0 60 28222.0 61 26313.0 62 23522.0 63 20731.0 64 17765.5 65 14800.0 66 12148.5 67 9497.0 68 7689.5 69 5882.0 70 4749.5 71 3617.0 72 3039.0 73 2461.0 74 1966.0 75 1243.5 76 1016.0 77 762.5 78 509.0 79 406.0 80 303.0 81 230.0 82 157.0 83 94.5 84 32.0 85 17.5 86 3.0 87 9.5 88 16.0 89 9.0 90 2.0 91 1.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 800831.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 29.74155286089416 #Duplication Level Percentage of deduplicated Percentage of total 1 74.98561910607711 22.301887544502673 2 9.868474384274924 5.870075051125852 3 3.422051400057823 3.053313678225499 4 1.6248960463054334 1.9330772661860391 5 0.9813617689016387 1.4593611462724343 6 0.6746639887496285 1.2039332810843266 7 0.5345206686197859 1.1128232304697097 8 0.4418812359311377 1.051378730934654 9 0.37788543727219254 1.0115009737193716 >10 6.811375682065511 48.7123909435576 >50 0.21703128374393746 3.9779903044169687 >100 0.05254891314971571 2.7595743244297837 >500 0.002563361617059303 0.5475184530789179 >1k 0.003417815489412404 1.695795143836444 >5k 0.001708907744706202 3.3093799281597622 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7465 0.9321567222048098 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGC 6468 0.8076610420925263 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCG 6372 0.7956734941579434 No Hit GAATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTC 5740 0.7167554702552723 No Hit GCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 4087 0.5103448792566722 No Hit CTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGCT 1729 0.21590073311347838 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGCAGACTT 1509 0.18842926909672578 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCT 1390 0.1735697044694823 No Hit GAACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCT 1258 0.15708682605943075 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTC 1143 0.14272674259612828 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGCAGACTTCGTA 1135 0.14172778026824637 No Hit CCTGTCTCTTATACACATCTGACGCGGCAGACTTCGTATGCCGTCTTCTGC 1095 0.1367329686288368 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 854 0.10663922850139416 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.22601522668328275 0.0 2 0.0 0.0 0.0 1.0843736069158163 0.0 3 0.0 0.0 0.0 1.3859353596451687 0.0 4 0.0 0.0 0.0 1.8986527744305604 0.0 5 0.0 0.0 0.0 3.5116023230868936 0.0 6 0.0 0.0 0.0 4.210751082313247 0.0 7 0.0 0.0 0.0 4.922886351802066 0.0 8 0.0 0.0 0.0 5.994398318746402 0.0 9 0.0 0.0 0.0 6.383743886038378 0.0 10 0.0 0.0 0.0 8.026412563949197 0.0 11 0.0 0.0 0.0 9.176343073632264 0.0 12 0.0 0.0 0.0 10.985713590008379 0.0 13 0.0 0.0 0.0 11.460845047207213 0.0 14 0.0 0.0 0.0 11.670127654898474 0.0 15 0.0 0.0 0.0 12.131398509797947 0.0 16 0.0 0.0 0.0 12.767987253240696 0.0 17 0.0 0.0 0.0 13.529696028250655 0.0 18 0.0 0.0 0.0 14.368699513380475 0.0 19 0.0 0.0 0.0 15.056609946418158 0.0 20 0.0 0.0 0.0 15.56620560392892 0.0 21 0.0 0.0 0.0 16.115385143682 0.0 22 0.0 0.0 0.0 16.716385854193955 0.0 23 0.0 0.0 0.0 17.26369233958226 0.0 24 0.0 0.0 0.0 17.71322538712912 0.0 25 0.0 0.0 0.0 18.11106213420809 0.0 26 0.0 0.0 0.0 18.509148621869034 0.0 27 0.0 0.0 0.0 18.914602456698105 0.0 28 0.0 0.0 0.0 19.325425714039543 0.0 29 0.0 0.0 0.0 19.73749767429083 0.0 30 0.0 0.0 0.0 20.20101619442804 0.0 31 0.0 0.0 0.0 20.641183970151005 0.0 32 0.0 0.0 0.0 21.071861603759096 0.0 33 0.0 0.0 0.0 21.481061547317722 0.0 34 0.0 0.0 0.0 21.91261327296271 0.0 35 0.0 0.0 0.0 22.347037015300355 0.0 36 0.0 0.0 0.0 22.770222431449334 0.0 37 0.0 0.0 0.0 23.170931195220962 0.0 38 0.0 0.0 0.0 23.564647222697424 0.0 39 0.0 0.0 0.0 23.985335233026692 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TTGTGCG 65 0.0 45.000004 1 GTTAACG 35 1.2113196E-7 45.000004 1 GTCACGC 20 7.032003E-4 45.000004 37 ACTACCG 20 7.032003E-4 45.000004 10 CGCACGG 35 1.2113196E-7 45.000004 2 ATACGGA 20 7.032003E-4 45.000004 28 TACACGT 20 7.032003E-4 45.000004 41 GATTACG 25 3.8897422E-5 45.0 1 CGTTTTT 3730 0.0 42.345844 1 CGATGAA 835 0.0 40.958084 19 CTGCGCG 50 1.0804797E-9 40.5 1 TTGTCGG 45 1.9270374E-8 40.0 2 ATAACGG 85 0.0 39.705883 2 CGGGTCA 40 3.4564619E-7 39.375004 6 CGAATAT 160 0.0 39.375004 14 TATAGCG 40 3.4564619E-7 39.375004 1 TACGGCT 970 0.0 39.20103 7 AATGACG 75 0.0 39.000004 1 CTTGCGG 150 0.0 39.000004 2 CCGATGA 855 0.0 38.68421 18 >>END_MODULE