SRR3551237_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551237_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	856345
Sequences flagged as poor quality	0
Sequence length	51
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	14838	1.7327128668936	No Hit
CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT	1951	0.22782873724958982	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	1798	0.20996210639403512	No Hit
CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC	1549	0.18088504049185783	No Hit
CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG	1364	0.1592815979540956	No Hit
CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT	1156	0.1349923220197467	No Hit
GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	1148	0.13405811909919485	No Hit
CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC	967	0.11292177802170855	No Hit
GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG	926	0.10813398805388015	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC	925	0.10801721268881116	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTCACG	20	7.0322776E-4	45.0	1
CGTTTTT	6735	0.0	42.995544	1
CGTAAGG	120	0.0	41.249996	2
CGGTCTA	70	0.0	38.57143	31
AACGTAG	65	9.094947E-12	38.076927	1
CGTTATT	285	0.0	37.894737	1
TCGTTTA	30	1.1396791E-4	37.499996	38
TACGATA	30	1.1396791E-4	37.499996	43
GCGTAAG	85	0.0	37.058823	1
GTTTTTT	7950	0.0	37.018867	2
ATAACGG	55	2.748493E-9	36.81818	2
GTACGAG	55	2.748493E-9	36.81818	1
CACGACG	80	0.0	36.5625	26
ACGGTCT	75	1.8189894E-12	36.000004	30
AACGTAA	25	0.0021068095	36.0	42
GATTTCG	25	0.0021068095	36.0	20
TAGCACG	25	0.0021068095	36.0	1
TACGCGG	25	0.0021068095	36.0	2
CGTAGCG	25	0.0021068095	36.0	2
TGCGACG	25	0.0021068095	36.0	1