##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551237_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 856345 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.626230082501795 33.0 31.0 34.0 30.0 34.0 2 31.806930617916844 33.0 31.0 34.0 30.0 34.0 3 31.75642760803181 33.0 31.0 34.0 30.0 34.0 4 35.45830360427164 37.0 35.0 37.0 33.0 37.0 5 34.36210055526686 37.0 35.0 37.0 32.0 37.0 6 34.772398974712296 37.0 35.0 37.0 32.0 37.0 7 35.4859817013003 37.0 35.0 37.0 33.0 37.0 8 35.36332085783183 37.0 35.0 37.0 33.0 37.0 9 37.32002872673981 39.0 37.0 39.0 34.0 39.0 10 36.772108204053275 39.0 37.0 39.0 32.0 39.0 11 36.85310476501877 39.0 37.0 39.0 33.0 39.0 12 36.86420893448318 39.0 37.0 39.0 33.0 39.0 13 37.01669420619026 39.0 37.0 39.0 33.0 39.0 14 38.08942423906253 40.0 37.0 41.0 33.0 41.0 15 38.21669070292931 40.0 37.0 41.0 33.0 41.0 16 38.222724486042424 40.0 37.0 41.0 34.0 41.0 17 38.10913241742522 40.0 37.0 41.0 33.0 41.0 18 37.961763074461814 39.0 37.0 41.0 33.0 41.0 19 37.81068728141111 39.0 37.0 41.0 33.0 41.0 20 37.86815127080791 39.0 36.0 41.0 34.0 41.0 21 37.686351879207564 39.0 35.0 41.0 33.0 41.0 22 37.799551582598134 40.0 35.0 41.0 33.0 41.0 23 37.8693213599659 40.0 35.0 41.0 34.0 41.0 24 37.73053967734967 40.0 35.0 41.0 33.0 41.0 25 37.41355995539181 39.0 35.0 41.0 33.0 41.0 26 37.55153822349637 39.0 35.0 41.0 33.0 41.0 27 37.622725653796074 40.0 35.0 41.0 33.0 41.0 28 37.463522295336574 39.0 35.0 41.0 33.0 41.0 29 37.44868948846551 40.0 35.0 41.0 33.0 41.0 30 37.111034688122196 39.0 35.0 41.0 32.0 41.0 31 36.95627580005722 39.0 35.0 41.0 32.0 41.0 32 36.849956501176514 39.0 35.0 41.0 31.0 41.0 33 36.71195020698433 39.0 35.0 41.0 31.0 41.0 34 36.46419959245397 39.0 35.0 41.0 30.0 41.0 35 36.37798200491624 39.0 35.0 41.0 30.0 41.0 36 36.16109979038822 39.0 35.0 41.0 30.0 41.0 37 36.15947194179916 39.0 35.0 41.0 30.0 41.0 38 35.95026887527807 39.0 35.0 41.0 29.0 41.0 39 35.91598012483286 39.0 35.0 41.0 29.0 41.0 40 35.84072657632146 39.0 35.0 41.0 28.0 41.0 41 35.681753265331146 39.0 35.0 41.0 27.0 41.0 42 35.778496984276195 39.0 35.0 41.0 28.0 41.0 43 35.72027161949915 39.0 35.0 41.0 28.0 41.0 44 35.72953307370277 39.0 35.0 41.0 28.0 41.0 45 35.68870373506005 39.0 35.0 41.0 27.0 41.0 46 35.617956547886656 39.0 35.0 41.0 27.0 41.0 47 35.5703764253893 38.0 35.0 41.0 27.0 41.0 48 35.50438900209612 38.0 35.0 40.0 27.0 41.0 49 35.466125218223965 38.0 35.0 40.0 27.0 41.0 50 35.37860558536571 38.0 35.0 40.0 27.0 41.0 51 34.48745540640746 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 5.0 8 20.0 9 47.0 10 46.0 11 55.0 12 42.0 13 82.0 14 95.0 15 101.0 16 168.0 17 260.0 18 444.0 19 666.0 20 1102.0 21 1702.0 22 2480.0 23 3654.0 24 5449.0 25 8495.0 26 12280.0 27 14505.0 28 14157.0 29 13717.0 30 14417.0 31 17071.0 32 21203.0 33 30054.0 34 51863.0 35 64625.0 36 71411.0 37 102916.0 38 171797.0 39 231358.0 40 58.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.545265050884865 20.054650870852285 22.925573221073282 19.474510857189568 2 38.2977655033894 21.920604429289597 23.662425774658576 16.11920429266242 3 30.904833916237028 21.886739573419593 31.62743987528391 15.580986635059467 4 27.247663033006557 24.002008536279188 31.13885174783528 17.61147668287898 5 23.896326830891752 30.347932200223042 28.158160554449434 17.59758041443577 6 24.98280482749359 32.41894329972149 28.40934436471282 14.188907508072097 7 75.01053897669748 5.614326001786663 14.881618973661318 4.493516047854545 8 76.59716586188978 5.566681652838517 13.437691584583316 4.3984609006883915 9 70.44368799957961 7.113371363177225 15.881566424747035 6.5613742124961325 10 37.35900834359984 26.800179834062206 22.028621641978408 13.81219018035955 11 27.747111269406606 22.71047299861621 31.1097746819331 18.432641050044083 12 24.958398776194173 20.677180342035044 33.83951561578569 20.524905265985087 13 23.418482037029467 21.265144305157385 35.58869380915402 19.727679848659125 14 20.021253116442555 24.90129562267544 34.242857726733966 20.834593534148034 15 20.188241888491206 23.85568900384775 36.137771575708385 19.81829753195266 16 22.984194454337914 23.134834675276903 33.97182210440886 19.90914876597633 17 22.004682692139266 23.705165558273826 32.61769497106891 21.672456778518004 18 22.968896881513874 23.414628449982192 32.47032446035185 21.146150208152086 19 23.29423304859607 24.582849202132316 31.041577868732812 21.081339880538803 20 24.370551588436904 24.416444306909014 31.22001062655822 19.992993478095862 21 23.631713853645437 25.129124359925033 31.65955310067788 19.579608685751655 22 22.99248550525781 22.681512708079104 31.752155965177586 22.5738458214855 23 22.148900267999462 24.349532022724485 31.61833139680853 21.88323631246752 24 21.73177866397305 23.975617303773596 32.60952069551408 21.68308333673928 25 23.079483152234204 24.662840327204574 30.559529161728044 21.698147358833182 26 21.303213074169875 24.658753189427156 31.335735013341587 22.702298723061386 27 22.861930647110682 23.967559803583836 31.412339652826837 21.758169896478638 28 22.00293106166323 25.312928784543615 31.877339156531537 20.806800997261618 29 23.61396399815495 23.530236061400487 31.32686008559634 21.528939854848222 30 23.869818823021095 23.237013119712266 31.84616013405812 21.04700792320852 31 24.24992263632064 23.899830091843825 30.322008069177723 21.528239202657808 32 24.45614793103247 24.88296189035961 30.071408135739684 20.589482042868237 33 23.515639140766865 25.368630633681516 29.496055912044795 21.619674313506824 34 22.346717736426324 25.227332441948047 31.414558384763154 21.01139143686248 35 22.535543501742872 25.227916318773392 30.395693324536253 21.84084685494748 36 23.12899590702345 26.878769654753633 29.18029532489826 20.811939113324655 37 22.625810858941197 26.948134221604608 29.966660633272806 20.459394286181386 38 21.161681331706266 27.018082665280936 29.52069551407435 22.299540488938455 39 22.166299797394743 25.71557024330147 29.456585838651478 22.66154412065231 40 22.070193671942967 24.970893740256557 31.11783218212286 21.84108040567762 41 20.663284073591832 26.120897535455924 30.222281907408817 22.99353648354343 42 22.144229253396702 26.172629022181482 29.25246250051089 22.430679223910925 43 22.580735568024572 25.009196059999184 29.74513776573694 22.66493060623931 44 22.577932959262913 25.120132656814718 29.854322732076444 22.44761165184593 45 21.928078052654012 24.64380594269833 30.08098371567534 23.34713228897232 46 22.83378778412906 25.333247698065612 29.440120512176755 22.39284400562857 47 22.259136212624583 24.998919827873113 30.940567177948143 21.801376781554165 48 21.390794597971613 24.332366044059345 31.131611675201 23.145227682768045 49 21.723020511592875 24.872919208963676 30.773928731994697 22.63013154744875 50 20.882121107731113 23.718010848431415 32.11334216933596 23.286525874501514 51 21.102826547711494 24.155334590614764 30.6044876772796 24.13735118439414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 454.0 1 847.5 2 1241.0 3 12488.5 4 23736.0 5 15444.0 6 7152.0 7 6791.5 8 6431.0 9 6193.5 10 5956.0 11 5923.0 12 5890.0 13 5535.0 14 5180.0 15 4944.5 16 4709.0 17 4421.0 18 4133.0 19 4031.0 20 3929.0 21 3729.0 22 3529.0 23 3861.0 24 4193.0 25 4599.0 26 6080.5 27 7156.0 28 8370.5 29 9585.0 30 11061.5 31 12538.0 32 14045.5 33 15553.0 34 18066.0 35 20579.0 36 21395.5 37 22212.0 38 24778.5 39 27345.0 40 30713.5 41 34082.0 42 38561.0 43 43040.0 44 52729.5 45 62419.0 46 65879.5 47 69340.0 48 70236.0 49 71132.0 50 64787.5 51 58443.0 52 54365.5 53 50288.0 54 47858.0 55 45428.0 56 43647.5 57 41867.0 58 40455.5 59 39044.0 60 37619.5 61 36195.0 62 33593.0 63 30991.0 64 27830.5 65 24670.0 66 20424.0 67 16178.0 68 13938.0 69 11698.0 70 10257.5 71 8817.0 72 7511.0 73 6205.0 74 5298.5 75 3463.0 76 2534.0 77 2021.0 78 1508.0 79 1188.5 80 869.0 81 654.5 82 440.0 83 284.5 84 129.0 85 94.5 86 60.0 87 52.5 88 45.0 89 29.5 90 14.0 91 10.0 92 6.0 93 5.0 94 4.0 95 2.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 856345.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.269841569041045 #Duplication Level Percentage of deduplicated Percentage of total 1 72.79227932995437 22.762030420970547 2 7.580266541967321 4.740674676368415 3 3.2192974554341705 3.0200076418513047 4 1.9498952293440144 2.4389165959126515 5 1.4764581616722645 2.308430639940465 6 1.256326335005256 2.3571075272777007 7 1.0737369953473879 2.3502910011931686 8 1.0045842605841107 2.513055253697391 9 0.862790807013533 2.428139865828442 >10 8.682502494508155 48.00404947599307 >50 0.06241943552913555 1.3350386001255048 >100 0.0321670689881637 1.884069985933153 >500 0.004595295569737597 1.0077750731926576 >1k 0.0022976477848687983 1.0736348985557709 >5k 0.0 0.0 >10k+ 3.8294129747813303E-4 1.7767783431597732 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14838 1.7327128668936 No Hit CGTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTT 1951 0.22782873724958982 No Hit GAATCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 1798 0.20996210639403512 No Hit CGTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTC 1549 0.18088504049185783 No Hit CGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTG 1364 0.1592815979540956 No Hit CGTTTTCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCT 1156 0.1349923220197467 No Hit GCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 1148 0.13405811909919485 No Hit CCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCGTCTTCTGC 967 0.11292177802170855 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGCCG 926 0.10813398805388015 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGTATTCATCGTATGC 925 0.10801721268881116 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07532011046949535 0.0 2 0.0 0.0 0.0 0.3851251539975127 0.0 3 0.0 0.0 0.0 0.7125632776509467 0.0 4 0.0 0.0 0.0 1.0269225604166545 0.0 5 0.0 0.0 0.0 1.9028545737991114 0.0 6 0.0 0.0 0.0 2.905020756821141 0.0 7 0.0 0.0 0.0 3.6332319333913317 0.0 8 0.0 0.0 0.0 4.699274241106096 0.0 9 0.0 0.0 0.0 5.34317360409648 0.0 10 0.0 0.0 0.0 6.317313699501953 0.0 11 0.0 0.0 0.0 7.106598392003223 0.0 12 0.0 0.0 0.0 7.886774606029112 0.0 13 0.0 0.0 0.0 8.265477114947831 0.0 14 0.0 0.0 0.0 8.472286286485003 0.0 15 0.0 0.0 0.0 8.680263211672866 0.0 16 0.0 0.0 0.0 8.994856045168712 0.0 17 0.0 0.0 0.0 9.336891089455769 0.0 18 0.0 0.0 0.0 9.759617911005494 0.0 19 0.0 0.0 0.0 10.036959403044333 0.0 20 0.0 0.0 0.0 10.295032959846791 0.0 21 0.0 0.0 0.0 10.562798871949973 0.0 22 0.0 0.0 0.0 10.861393480431369 0.0 23 0.0 0.0 0.0 11.161739719388798 0.0 24 0.0 0.0 0.0 11.422032008127566 0.0 25 0.0 0.0 0.0 11.662589260169675 0.0 26 0.0 0.0 0.0 11.907233649989198 0.0 27 0.0 0.0 0.0 12.156081952951205 0.0 28 0.0 0.0 0.0 12.403762502262524 0.0 29 0.0 0.0 0.0 12.65389533424029 0.0 30 0.0 0.0 0.0 12.966152660434755 0.0 31 0.0 0.0 0.0 13.233451471077661 0.0 32 0.0 0.0 0.0 13.53508223905085 0.0 33 0.0 0.0 0.0 13.786966701504651 0.0 34 1.1677536506898504E-4 0.0 0.0 14.052046780211247 0.0 35 1.1677536506898504E-4 0.0 0.0 14.309302909458221 0.0 36 1.1677536506898504E-4 0.0 0.0 14.57286490841892 0.0 37 1.1677536506898504E-4 0.0 0.0 14.855578067250933 0.0 38 1.1677536506898504E-4 0.0 0.0 15.164448907858398 0.0 39 1.1677536506898504E-4 0.0 0.0 15.473319748465864 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTTCACG 20 7.0322776E-4 45.0 1 CGTTTTT 6735 0.0 42.995544 1 CGTAAGG 120 0.0 41.249996 2 CGGTCTA 70 0.0 38.57143 31 AACGTAG 65 9.094947E-12 38.076927 1 CGTTATT 285 0.0 37.894737 1 TCGTTTA 30 1.1396791E-4 37.499996 38 TACGATA 30 1.1396791E-4 37.499996 43 GCGTAAG 85 0.0 37.058823 1 GTTTTTT 7950 0.0 37.018867 2 ATAACGG 55 2.748493E-9 36.81818 2 GTACGAG 55 2.748493E-9 36.81818 1 CACGACG 80 0.0 36.5625 26 ACGGTCT 75 1.8189894E-12 36.000004 30 AACGTAA 25 0.0021068095 36.0 42 GATTTCG 25 0.0021068095 36.0 20 TAGCACG 25 0.0021068095 36.0 1 TACGCGG 25 0.0021068095 36.0 2 CGTAGCG 25 0.0021068095 36.0 2 TGCGACG 25 0.0021068095 36.0 1 >>END_MODULE