SRR3551231_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551231_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	605958
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC	1653	0.2727911835473746	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1154	0.19044224187154885	No Hit
CTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGCT	900	0.14852514530710048	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	854	0.14093386010251535	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	788	0.130042016113328	No Hit
CCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC	777	0.12822670878179676	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCC	692	0.11419933394723727	No Hit
TCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC	630	0.10396760171497035	No Hit
ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC	621	0.10248235026189934	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGCGAA	25	3.888614E-5	45.000004	1
CACGACG	25	3.888614E-5	45.000004	26
TATTGCG	25	3.888614E-5	45.000004	1
CTCGAAC	25	3.888614E-5	45.000004	12
ACATCCG	25	3.888614E-5	45.000004	16
ACGACCC	25	3.888614E-5	45.000004	34
ACTATCG	20	7.030643E-4	45.0	26
CTATCGA	20	7.030643E-4	45.0	27
GCGAAGT	20	7.030643E-4	45.0	43
CTATACG	20	7.030643E-4	45.0	1
GGCGTAT	20	7.030643E-4	45.0	8
CGACCTT	20	7.030643E-4	45.0	29
ACGGGTA	70	0.0	45.0	5
ATCCGAT	20	7.030643E-4	45.0	19
TCGGAAC	20	7.030643E-4	45.0	33
GAGCGTA	20	7.030643E-4	45.0	9
CGTAAAT	20	7.030643E-4	45.0	14
TTCGGAA	20	7.030643E-4	45.0	32
TAGGCGA	20	7.030643E-4	45.0	20
TAGCTAA	20	7.030643E-4	45.0	20