##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551231_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 605958 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.354569128553464 33.0 31.0 34.0 30.0 34.0 2 32.44859379692982 34.0 31.0 34.0 31.0 34.0 3 32.475706237065936 34.0 31.0 34.0 30.0 34.0 4 35.97441406830176 37.0 35.0 37.0 35.0 37.0 5 36.01980335270761 37.0 35.0 37.0 35.0 37.0 6 36.056358691526476 37.0 35.0 37.0 35.0 37.0 7 36.19268497156568 37.0 37.0 37.0 35.0 37.0 8 35.857453816931205 37.0 36.0 37.0 35.0 37.0 9 37.755603523676555 39.0 38.0 39.0 35.0 39.0 10 37.63431128890121 39.0 37.0 39.0 35.0 39.0 11 37.56689737572571 39.0 37.0 39.0 35.0 39.0 12 37.39045280365966 39.0 37.0 39.0 35.0 39.0 13 37.310250875473216 39.0 37.0 39.0 34.0 39.0 14 38.55833737651785 40.0 38.0 41.0 35.0 41.0 15 38.66639602084633 40.0 38.0 41.0 35.0 41.0 16 38.715363110974685 40.0 38.0 41.0 35.0 41.0 17 38.719071288769186 40.0 38.0 41.0 35.0 41.0 18 38.70304542559055 40.0 38.0 41.0 35.0 41.0 19 38.71363196789216 40.0 38.0 41.0 35.0 41.0 20 38.65111773423241 40.0 38.0 41.0 35.0 41.0 21 38.60043435353605 40.0 38.0 41.0 35.0 41.0 22 38.58750771505616 40.0 38.0 41.0 35.0 41.0 23 38.555140785334956 40.0 38.0 41.0 35.0 41.0 24 38.48908175154054 40.0 37.0 41.0 35.0 41.0 25 38.40396199076503 40.0 37.0 41.0 34.0 41.0 26 38.37941738536334 40.0 37.0 41.0 34.0 41.0 27 38.356414140914055 40.0 37.0 41.0 34.0 41.0 28 38.31830093834886 40.0 37.0 41.0 34.0 41.0 29 38.297375395654484 40.0 37.0 41.0 34.0 41.0 30 38.22833925783635 40.0 37.0 41.0 34.0 41.0 31 38.18746018700966 40.0 37.0 41.0 34.0 41.0 32 38.113021034461134 40.0 37.0 41.0 34.0 41.0 33 38.06693368187234 40.0 37.0 41.0 34.0 41.0 34 38.00907653665766 40.0 37.0 41.0 34.0 41.0 35 37.92992583644411 40.0 36.0 41.0 34.0 41.0 36 37.86623165301886 40.0 36.0 41.0 34.0 41.0 37 37.82161965020678 40.0 36.0 41.0 34.0 41.0 38 37.74139131755006 40.0 36.0 41.0 33.0 41.0 39 37.71084134543978 40.0 36.0 41.0 33.0 41.0 40 37.59991121496869 40.0 36.0 41.0 33.0 41.0 41 37.53274814426082 40.0 35.0 41.0 33.0 41.0 42 37.500148525145306 40.0 35.0 41.0 33.0 41.0 43 37.43617214394397 40.0 35.0 41.0 33.0 41.0 44 37.39298268196806 40.0 35.0 41.0 33.0 41.0 45 37.31443928457088 40.0 35.0 41.0 33.0 41.0 46 37.168729515907046 39.0 35.0 41.0 33.0 41.0 47 37.10920393822674 39.0 35.0 41.0 33.0 41.0 48 37.07603497272088 39.0 35.0 41.0 33.0 41.0 49 36.98541648101023 39.0 35.0 41.0 32.0 41.0 50 36.9382019875965 39.0 35.0 41.0 32.0 41.0 51 36.13921591925513 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 8.0 10 4.0 11 5.0 12 14.0 13 15.0 14 18.0 15 23.0 16 35.0 17 60.0 18 94.0 19 196.0 20 297.0 21 538.0 22 745.0 23 1025.0 24 1718.0 25 2362.0 26 3257.0 27 4145.0 28 4559.0 29 5308.0 30 6255.0 31 8104.0 32 10560.0 33 15483.0 34 31448.0 35 50634.0 36 36598.0 37 55446.0 38 104239.0 39 262184.0 40 579.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.42990768337079 22.18652117803544 23.50988022272171 10.873690915872057 2 32.83197845395225 25.55276108245126 24.75683133154443 16.858429132052056 3 32.862508622709825 24.026087616633497 25.922918750144397 17.18848501051228 4 29.342132623053086 25.85212176421468 25.37832655068503 19.427419062047203 5 25.886282547635314 30.67192775736932 23.596189834939054 19.845599860056307 6 25.993055624317197 34.710326458269385 23.739599114130023 15.557018803283395 7 79.55749408374838 7.067981609286453 8.419890487459526 4.954633819505642 8 79.67697431175098 6.8050921020928845 8.396786575967312 5.121147010188825 9 73.33726099828701 8.918109835995235 10.695790797381997 7.048838368335759 10 40.019605319180535 27.57880909237934 17.713438885203264 14.688146703236857 11 30.911053241313752 25.99767640661564 24.148043263724546 18.943227088346056 12 30.45871165988402 22.309632020701102 27.510322497598843 19.721333821816035 13 24.554837133926775 25.90823126355292 29.142118760706186 20.39481284181412 14 19.571818508873555 29.702058558513954 28.107558609672616 22.618564322939875 15 19.683872479610798 27.390842269596245 33.37360015050548 19.55168510028748 16 21.790454123883173 26.208582112951724 31.16965202208734 20.831311741077766 17 21.841117701226818 26.165179764934205 27.62930764178375 24.364394892055223 18 22.120179946464937 27.80737278821304 29.065545796903415 21.006901468418604 19 23.831849732159654 27.602573115628477 27.345459586307964 21.220117565903905 20 25.972097076034974 26.830902471788477 28.291234706035734 18.90576574614082 21 24.618042834651906 27.15122170183412 27.97900184501236 20.251733618501614 22 22.562619851540866 25.991240316985664 27.68805758814967 23.758082243323795 23 22.608662646586065 26.575439221860258 28.165648444281615 22.650249687272055 24 22.8066961736622 25.68577360147073 29.145089263612327 22.36244096125474 25 22.55304823106552 28.12571168298793 26.443746926354635 22.877493159591918 26 20.58806055865258 29.26787005039953 27.01094795348852 23.133121437459362 27 22.15764128867017 28.36764264189927 28.034946316411368 21.439769753019185 28 20.47056066592074 27.726344070051063 29.543631736853047 22.25946352717515 29 20.839398110100042 27.0206846019031 28.227038837675217 23.91287845032164 30 21.56519098683407 27.65307166503289 27.822555358622214 22.959181989510824 31 23.946214094046123 28.134788219645586 25.19828106898498 22.720716617323315 32 23.70956402919014 28.473425550945773 24.960805864432846 22.856204555431233 33 22.457992138068974 28.69901874387334 25.765152040240412 23.07783707781727 34 22.673848682581962 27.752418484449414 26.64673129160767 22.92700154136095 35 21.553804059027193 27.06771756458368 26.467180893725306 24.911297482663816 36 22.119189778829558 29.27711161499642 25.978863221543406 22.624835384630618 37 22.977170034886907 28.304601969113367 26.30842401618594 22.409803979813784 38 21.842933008558347 27.866782846335887 25.726535502460568 24.5637486426452 39 23.407397872459807 25.979853389178786 27.54332808544487 23.069420652916538 40 22.783262206291525 26.401499773911723 29.11043339637401 21.704804623422746 41 20.258004680192357 28.486792814023413 27.25106360506834 24.00413890071589 42 21.583344060149383 28.08428967024117 26.39522871222098 23.937137557388468 43 22.84828321434819 26.726109730377352 26.63699464319309 23.788612412081363 44 22.056644189861345 26.13035886975665 26.491274972852903 25.321721967529104 45 21.835506751292993 26.057086464738482 26.271787813676855 25.83561897029167 46 22.975189699616145 27.272517237168252 26.2079220011948 23.5443710620208 47 21.76999065941864 27.321695563058825 28.644394495988173 22.263919281534363 48 22.219361737942233 25.47552800689157 27.880315137352753 24.424795117813446 49 21.439274669201495 26.194224682238705 28.372593480076176 23.993907168483624 50 20.697969166179835 24.81525122203189 28.860746124318847 25.626033487469428 51 20.43012882080936 25.669435835486947 26.49144000079213 27.408995342911556 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 359.0 1 710.5 2 1062.0 3 1720.0 4 2378.0 5 1732.5 6 1087.0 7 1083.0 8 1079.0 9 1063.5 10 1048.0 11 1065.5 12 1083.0 13 1065.0 14 1047.0 15 1128.0 16 1209.0 17 1182.5 18 1156.0 19 1311.0 20 1466.0 21 1553.5 22 1641.0 23 1981.5 24 2322.0 25 2734.0 26 4530.5 27 5915.0 28 7266.0 29 8617.0 30 10303.0 31 11989.0 32 12564.0 33 13139.0 34 15308.0 35 17477.0 36 18414.5 37 19352.0 38 21008.0 39 22664.0 40 26267.0 41 29870.0 42 32617.5 43 35365.0 44 38743.0 45 42121.0 46 47302.0 47 52483.0 48 55212.5 49 57942.0 50 55924.5 51 53907.0 52 48665.5 53 43424.0 54 38489.5 55 33555.0 56 30139.0 57 26723.0 58 26849.5 59 26976.0 60 25060.0 61 23144.0 62 21576.5 63 20009.0 64 17707.5 65 15406.0 66 12092.5 67 8779.0 68 7591.5 69 6404.0 70 5360.5 71 4317.0 72 3493.0 73 2669.0 74 2246.5 75 1446.5 76 1069.0 77 696.5 78 324.0 79 282.5 80 241.0 81 147.0 82 53.0 83 80.0 84 107.0 85 56.0 86 5.0 87 3.0 88 1.0 89 1.0 90 1.0 91 1.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 1.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 605958.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.75692169714535 #Duplication Level Percentage of deduplicated Percentage of total 1 70.72850992425967 18.92477201799184 2 11.788428394204892 6.308441109522906 3 4.360177198107952 3.4999475962635924 4 2.1702440246038948 2.3227619772009604 5 1.2145128078364986 1.6248312049730664 6 0.8579598787660507 1.3773819177261324 7 0.5994980625008939 1.122850590114874 8 0.48504902704897085 1.038273506882068 9 0.37133134585024313 0.89421153701495 >10 6.543124549662739 44.82224767522364 >50 0.8138622433016597 13.232277071085683 >100 0.05795496832086856 2.954827263498442 >500 0.008101232130874101 1.4091329611097192 >1k 0.0012463434047498617 0.4680435713921408 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC 1653 0.2727911835473746 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1154 0.19044224187154885 No Hit CTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGCT 900 0.14852514530710048 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 854 0.14093386010251535 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 788 0.130042016113328 No Hit CCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC 777 0.12822670878179676 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCC 692 0.11419933394723727 No Hit TCTGTCTCTTATACACATCTGACGCACGCTGAATCGTATGCCGTCTTCTGC 630 0.10396760171497035 No Hit ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC 621 0.10248235026189934 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.15331095554477372 0.0 2 0.0 0.0 0.0 0.7543427102208404 0.0 3 0.0 0.0 0.0 1.072846632934956 0.0 4 0.0 0.0 0.0 1.545981734707686 0.0 5 0.0 0.0 0.0 2.851352734017869 0.0 6 0.0 0.0 0.0 3.5449651626020287 0.0 7 0.0 0.0 0.0 4.195835354925589 0.0 8 0.0 0.0 0.0 5.220328801666122 0.0 9 0.0 0.0 0.0 5.637189376161384 0.0 10 0.0 0.0 0.0 6.75508863650616 0.0 11 0.0 0.0 0.0 8.199743216526558 0.0 12 0.0 0.0 0.0 9.399166278851009 0.0 13 0.0 0.0 0.0 9.85662372639688 0.0 14 0.0 0.0 0.0 10.03551401252232 0.0 15 0.0 0.0 0.0 10.427125312315376 0.0 16 0.0 0.0 0.0 11.1430165126956 0.0 17 0.0 0.0 0.0 11.994230623244515 0.0 18 0.0 0.0 0.0 12.915416580027 0.0 19 1.6502793923011164E-4 0.0 0.0 13.491364087940088 0.0 20 1.6502793923011164E-4 0.0 0.0 14.079523663356206 0.0 21 1.6502793923011164E-4 0.0 0.0 14.756303242138895 0.0 22 1.6502793923011164E-4 0.0 0.0 15.464603157314533 0.0 23 1.6502793923011164E-4 0.0 0.0 16.163661507893288 0.0 24 1.6502793923011164E-4 0.0 0.0 16.71799035576723 0.0 25 1.6502793923011164E-4 0.0 0.0 17.25004043184511 0.0 26 1.6502793923011164E-4 0.0 0.0 17.72218536598246 0.0 27 1.6502793923011164E-4 0.0 0.0 18.184758679644464 0.0 28 1.6502793923011164E-4 0.0 0.0 18.645846741853397 0.0 29 1.6502793923011164E-4 0.0 0.0 19.106604748183866 0.0 30 1.6502793923011164E-4 0.0 0.0 19.61654108040491 0.0 31 1.6502793923011164E-4 0.0 0.0 20.158327804897368 0.0 32 1.6502793923011164E-4 0.0 0.0 20.670409500328404 0.0 33 1.6502793923011164E-4 0.0 0.0 21.158562144571075 0.0 34 1.6502793923011164E-4 0.0 0.0 21.66734328121751 0.0 35 1.6502793923011164E-4 0.0 0.0 22.19675291026771 0.0 36 1.6502793923011164E-4 0.0 0.0 22.702893599886462 0.0 37 1.6502793923011164E-4 0.0 0.0 23.19220143970374 0.0 38 1.6502793923011164E-4 0.0 0.0 23.64932883137115 0.0 39 1.6502793923011164E-4 0.0 0.0 24.15233399014453 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAA 25 3.888614E-5 45.000004 1 CACGACG 25 3.888614E-5 45.000004 26 TATTGCG 25 3.888614E-5 45.000004 1 CTCGAAC 25 3.888614E-5 45.000004 12 ACATCCG 25 3.888614E-5 45.000004 16 ACGACCC 25 3.888614E-5 45.000004 34 ACTATCG 20 7.030643E-4 45.0 26 CTATCGA 20 7.030643E-4 45.0 27 GCGAAGT 20 7.030643E-4 45.0 43 CTATACG 20 7.030643E-4 45.0 1 GGCGTAT 20 7.030643E-4 45.0 8 CGACCTT 20 7.030643E-4 45.0 29 ACGGGTA 70 0.0 45.0 5 ATCCGAT 20 7.030643E-4 45.0 19 TCGGAAC 20 7.030643E-4 45.0 33 GAGCGTA 20 7.030643E-4 45.0 9 CGTAAAT 20 7.030643E-4 45.0 14 TTCGGAA 20 7.030643E-4 45.0 32 TAGGCGA 20 7.030643E-4 45.0 20 TAGCTAA 20 7.030643E-4 45.0 20 >>END_MODULE