SRR3551224_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551224_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	721902
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGC	1784	0.24712495601896103	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1391	0.19268543375693656	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	976	0.13519840643189796	No Hit
CTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCCGTCTTCTGCT	883	0.12231577139279293	No Hit
CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGCGAAAATCGTATGCC	726	0.10056766707946507	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTCACGT	30	2.1643755E-6	45.000004	45
TATGTCG	30	2.1643755E-6	45.000004	27
GGTACCG	25	3.8893595E-5	45.0	10
CGTCTAT	20	7.0315413E-4	45.0	20
TATTGCG	20	7.0315413E-4	45.0	1
CGCCTAC	20	7.0315413E-4	45.0	10
CCTCCGA	20	7.0315413E-4	45.0	34
CTACGAG	20	7.0315413E-4	45.0	34
TCATCGG	20	7.0315413E-4	45.0	44
TTACGCG	25	3.8893595E-5	45.0	1
TAGGCGT	20	7.0315413E-4	45.0	16
ATACGCG	20	7.0315413E-4	45.0	33
CGCAAAG	25	3.8893595E-5	45.0	36
ACGAAGT	25	3.8893595E-5	45.0	18
TAATCCG	20	7.0315413E-4	45.0	1
TCGTCCC	90	0.0	42.500004	38
CGTATGG	70	0.0	41.785713	2
TCCGCTA	50	1.0804797E-9	40.5	2
CCGCTAG	50	1.0804797E-9	40.5	3
CGCTAGT	50	1.0804797E-9	40.5	4