##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551222_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 536123 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.24272601623135 33.0 31.0 34.0 30.0 34.0 2 32.35552662355467 34.0 31.0 34.0 30.0 34.0 3 32.3945773637766 34.0 31.0 34.0 30.0 34.0 4 35.903223700531406 37.0 35.0 37.0 35.0 37.0 5 35.96530646885137 37.0 35.0 37.0 35.0 37.0 6 36.019295945146915 37.0 35.0 37.0 35.0 37.0 7 36.24267192416666 37.0 37.0 37.0 35.0 37.0 8 35.981599371785954 37.0 36.0 37.0 35.0 37.0 9 37.864751185828624 39.0 38.0 39.0 35.0 39.0 10 37.64639271212017 39.0 37.0 39.0 35.0 39.0 11 37.57529895191961 39.0 37.0 39.0 35.0 39.0 12 37.546048201625375 39.0 37.0 39.0 35.0 39.0 13 37.52311689668229 39.0 37.0 39.0 35.0 39.0 14 38.77843517252571 40.0 38.0 41.0 35.0 41.0 15 38.8392383837291 40.0 38.0 41.0 35.0 41.0 16 38.90765738459272 40.0 38.0 41.0 35.0 41.0 17 38.922956112683096 40.0 38.0 41.0 35.0 41.0 18 38.94683123089291 40.0 38.0 41.0 35.0 41.0 19 38.93026040666041 40.0 38.0 41.0 35.0 41.0 20 38.872607591914544 40.0 38.0 41.0 35.0 41.0 21 38.845966317430886 40.0 38.0 41.0 35.0 41.0 22 38.83090447527899 40.0 38.0 41.0 35.0 41.0 23 38.78388354911093 40.0 38.0 41.0 35.0 41.0 24 38.74965446362122 40.0 38.0 41.0 35.0 41.0 25 38.68320702525353 40.0 38.0 41.0 35.0 41.0 26 38.697496656550825 40.0 38.0 41.0 35.0 41.0 27 38.66476722692367 40.0 38.0 41.0 35.0 41.0 28 38.632914461793284 40.0 38.0 41.0 35.0 41.0 29 38.62667149143014 40.0 38.0 41.0 35.0 41.0 30 38.58178253870847 40.0 38.0 41.0 35.0 41.0 31 38.53348392066746 40.0 38.0 41.0 35.0 41.0 32 38.48445599237488 40.0 38.0 41.0 35.0 41.0 33 38.445733535028346 40.0 38.0 41.0 35.0 41.0 34 38.41753478213022 40.0 38.0 41.0 35.0 41.0 35 38.38464307630898 40.0 38.0 41.0 35.0 41.0 36 38.34039017165837 40.0 38.0 41.0 35.0 41.0 37 38.29374788994316 40.0 38.0 41.0 34.0 41.0 38 38.244802032369435 40.0 38.0 41.0 34.0 41.0 39 38.21372334333726 40.0 38.0 41.0 34.0 41.0 40 38.137604616850986 40.0 38.0 41.0 34.0 41.0 41 38.119340151420474 40.0 38.0 41.0 34.0 41.0 42 38.09016774135786 40.0 37.0 41.0 34.0 41.0 43 38.00992682649317 40.0 37.0 41.0 34.0 41.0 44 37.98262525577153 40.0 37.0 41.0 34.0 41.0 45 37.9333660372713 40.0 37.0 41.0 34.0 41.0 46 37.81584822885793 40.0 37.0 41.0 33.0 41.0 47 37.77302037032547 40.0 37.0 41.0 33.0 41.0 48 37.78736409368746 40.0 37.0 41.0 33.0 41.0 49 37.715636150659456 40.0 37.0 41.0 33.0 41.0 50 37.690968303915334 40.0 36.0 41.0 33.0 41.0 51 36.9256420634817 39.0 35.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 5.0 11 5.0 12 4.0 13 8.0 14 5.0 15 12.0 16 17.0 17 39.0 18 54.0 19 97.0 20 219.0 21 348.0 22 542.0 23 768.0 24 1151.0 25 1716.0 26 2361.0 27 2901.0 28 3301.0 29 3800.0 30 4823.0 31 6320.0 32 8590.0 33 11857.0 34 21056.0 35 34482.0 36 29883.0 37 46821.0 38 95660.0 39 258790.0 40 486.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.40018615131229 22.83916190874109 26.852793109044004 12.90785883090261 2 28.386396405302516 25.40070095854869 27.843050941668235 18.36985169448056 3 31.775544044929987 24.54996334796306 27.79138369366731 15.883108913439639 4 27.264825422524307 27.252514814697378 27.230877988819728 18.25178177395859 5 23.962784659490453 30.144575032222082 26.192496871053844 19.70014343723362 6 24.38806020260276 32.54421093666938 26.254982531993594 16.812746328734267 7 81.57605624082534 4.367840961868825 8.88732622924217 5.168776568063672 8 80.53860774486452 5.020489701057407 8.475293915761869 5.9656086383162075 9 74.54968356142155 7.491004862690091 11.98736110929768 5.971950466590689 10 32.513993990185085 41.30022401575758 16.113279974931125 10.072502019126208 11 21.185623448350473 24.90249439027984 33.13717188033343 20.774710281036253 12 22.718294122803908 21.97760588521664 35.49782419332877 19.80627579865068 13 21.671519408792385 25.211192207758295 35.22326033391591 17.894028049533407 14 17.235410530792375 29.50442342522145 31.119724391604166 22.14044165238201 15 15.186813473773741 29.3615457646846 36.811888316673596 18.639752444868062 16 17.914359204883954 29.51412269199419 32.09170283684901 20.47981526627285 17 17.677659790756973 28.0873978545968 30.38854889642862 23.84639345821761 18 18.699813289114626 26.850927865433867 33.289002710198965 21.160256135252546 19 19.043018113380697 28.090382244373025 31.33758484526872 21.52901479697756 20 20.71670120476085 29.18099018322288 31.578201270976997 18.524107341039276 21 20.712038095735494 27.61679689175805 32.12080063716722 19.550364375339242 22 19.122477491172734 25.78699291020904 30.894216439138035 24.196313159480194 23 17.39041227479515 28.5757186317319 31.35679685445318 22.677072239019775 24 19.606694732365522 25.794826933371635 31.35064155053971 23.247836783723137 25 17.53496865458113 30.638118491465576 28.594744116555344 23.23216873739795 26 17.70395972565997 30.775586945533025 28.66898081223898 22.851472516568027 27 18.976055867776612 29.564484269468018 29.90638342320699 21.553076439548388 28 15.407098744131478 28.051398652921065 33.443817929840726 23.09768467310673 29 17.22701693454674 26.605461806339214 30.842735715498122 25.324785543615924 30 18.71883877393807 28.143914735984094 29.617830236718067 23.519416253359772 31 18.722755785519368 28.7508650067242 27.536777940882967 24.98960126687346 32 17.783978676535046 30.843295288581164 25.52492618298413 25.847799851899655 33 17.62207553117475 29.71818034294369 26.756733063121708 25.90301106275985 34 17.000762884636547 27.251022619809262 29.024496244331992 26.723718251222202 35 15.442911421446198 27.65895139734725 26.556592423753507 30.341544757453047 36 17.55324804196052 30.653413489068736 27.533980075467756 24.259358393502982 37 16.154128809993228 26.515370539969375 30.810093952320646 26.52040669771675 38 15.934776161440563 28.86203352588865 28.18756143646141 27.01562887620938 39 18.304754692486615 28.056434810668446 28.316636294283214 25.322174202561726 40 19.3194472164037 26.660299968477386 28.667302092989853 25.352950722129066 41 16.911977288793803 27.9202720271281 26.23819533950232 28.929555344575782 42 19.147098706826604 26.718868617835835 28.26832648478054 25.86570619055702 43 20.109191360937693 27.100124411748794 28.56564631623713 24.225037911076377 44 18.31949011700673 26.167875655399975 29.2826459599756 26.229988267617692 45 18.91916593766729 25.011797665834145 27.304555111420324 28.764481285078237 46 21.093666938370486 25.77319010749399 27.77888656147936 25.35425639265616 47 16.02524047653244 25.936398923381386 31.539590728247063 26.498769871839112 48 17.78547087142316 25.106552041229346 29.346250767081433 27.761726320266057 49 18.304381643764582 23.544783566457696 33.00847007123365 25.142364718544062 50 18.56626184662848 23.60838837356353 29.888104035827602 27.937245743980395 51 16.789617307968506 22.970102010173036 27.734866812280018 32.50541386957843 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 181.0 1 376.0 2 571.0 3 1291.0 4 2011.0 5 1387.0 6 763.0 7 761.5 8 760.0 9 814.5 10 869.0 11 873.5 12 878.0 13 881.5 14 885.0 15 898.0 16 911.0 17 986.5 18 1062.0 19 1316.0 20 1570.0 21 1807.0 22 2044.0 23 2493.0 24 2942.0 25 3236.5 26 4665.0 27 5799.0 28 7102.5 29 8406.0 30 10109.5 31 11813.0 32 13461.5 33 15110.0 34 16373.0 35 17636.0 36 19087.5 37 20539.0 38 22438.5 39 24338.0 40 26793.0 41 29248.0 42 32947.5 43 36647.0 44 42309.5 45 47972.0 46 54955.5 47 61939.0 48 66882.0 49 71825.0 50 66165.5 51 60506.0 52 48897.5 53 37289.0 54 29694.0 55 22099.0 56 18410.0 57 14721.0 58 12833.0 59 10945.0 60 9700.0 61 8455.0 62 7126.0 63 5797.0 64 4415.5 65 3034.0 66 2243.5 67 1453.0 68 1113.0 69 773.0 70 544.5 71 316.0 72 310.5 73 305.0 74 193.5 75 77.5 76 73.0 77 45.5 78 18.0 79 12.0 80 6.0 81 3.5 82 1.0 83 0.5 84 0.0 85 0.0 86 0.0 87 0.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 536123.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 31.30255418380918 #Duplication Level Percentage of deduplicated Percentage of total 1 68.17767118248926 21.341352463157957 2 13.020969618229076 8.151792140006973 3 5.1468664224122564 4.833301951931633 4 2.646577292126678 3.3137851635373723 5 1.5608935379782922 2.442997727386155 6 1.0474695998965406 1.9673084343992626 7 0.7810865454441185 1.711500273770619 8 0.6030810323390767 1.5102381353617218 9 0.521920577999278 1.4703702455220664 >10 6.24915334396573 41.98361636385833 >50 0.16969374110279803 3.418042028303249 >100 0.06498909233724176 3.723190715939711 >500 0.004814006839795686 0.9872125135201875 >1k 0.004814006839795686 3.1452918433047303 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTGAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC 3381 0.6306388645889096 No Hit GCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 3346 0.6241105119534136 No Hit CCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 2641 0.49261083743842365 No Hit CTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGCT 1933 0.3605515898403911 No Hit TCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 1707 0.3183970842511886 No Hit CTGAATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCT 1527 0.284822699268638 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1134 0.21151862539006908 No Hit ACTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTGC 1029 0.1919335674835812 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCC 969 0.18074210582273098 No Hit GAATCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTC 800 0.1492194888113362 No Hit CTGAATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTAT 651 0.12142735902022483 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGC 611 0.11396638457965803 No Hit ACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCGTCTTCTG 588 0.10967632427633212 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCACTCACCATCGTATGCCG 572 0.10669193450010539 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.595730830425108E-4 0.0 0.0 0.3683856130029863 0.0 2 5.595730830425108E-4 0.0 0.0 2.040576509495023 0.0 3 5.595730830425108E-4 0.0 0.0 2.7344471324677357 0.0 4 5.595730830425108E-4 0.0 0.0 3.714632649597201 0.0 5 5.595730830425108E-4 0.0 0.0 6.1379571478933 0.0 6 5.595730830425108E-4 0.0 0.0 7.3076514158131625 0.0 7 5.595730830425108E-4 0.0 0.0 8.91101482309097 0.0 8 5.595730830425108E-4 0.0 0.0 10.837811472367349 0.0 9 5.595730830425108E-4 0.0 0.0 11.525153742704566 0.0 10 5.595730830425108E-4 0.0 0.0 13.185966653174738 0.0 11 5.595730830425108E-4 0.0 0.0 15.538971467368496 0.0 12 5.595730830425108E-4 0.0 0.0 18.236486776355427 0.0 13 5.595730830425108E-4 0.0 0.0 18.97922678191385 0.0 14 5.595730830425108E-4 0.0 0.0 19.36738397718434 0.0 15 5.595730830425108E-4 0.0 0.0 19.855145181236395 0.0 16 5.595730830425108E-4 0.0 0.0 20.832346308589635 0.0 17 5.595730830425108E-4 0.0 0.0 22.395047405166352 0.0 18 5.595730830425108E-4 0.0 0.0 23.87325296620365 0.0 19 5.595730830425108E-4 0.0 0.0 24.852505861528044 0.0 20 5.595730830425108E-4 0.0 0.0 25.754164622670544 0.0 21 7.46097444056681E-4 0.0 0.0 26.891217127412926 0.0 22 7.46097444056681E-4 0.0 0.0 28.076765966018993 0.0 23 7.46097444056681E-4 0.0 0.0 29.184720670443163 0.0 24 7.46097444056681E-4 0.0 0.0 29.974651339338173 0.0 25 7.46097444056681E-4 0.0 0.0 30.668895011032916 0.0 26 7.46097444056681E-4 0.0 0.0 31.314642348863973 0.0 27 7.46097444056681E-4 0.0 0.0 31.99974632686902 0.0 28 7.46097444056681E-4 0.0 0.0 32.69137865750957 0.0 29 7.46097444056681E-4 0.0 0.0 33.390471962590674 0.0 30 7.46097444056681E-4 0.0 0.0 34.159325378691086 0.0 31 9.326218050708513E-4 0.0 0.0 34.84871941699946 0.0 32 9.326218050708513E-4 0.0 0.0 35.479917854671406 0.0 33 9.326218050708513E-4 0.0 0.0 36.07828800480487 0.0 34 0.0011191461660850215 0.0 0.0 36.717880038722456 0.0 35 0.0011191461660850215 0.0 0.0 37.424061269522106 0.0 36 0.0011191461660850215 0.0 0.0 38.068502936826064 0.0 37 0.0011191461660850215 0.0 0.0 38.71555594518422 0.0 38 0.0011191461660850215 0.0 0.0 39.303853779822916 0.0 39 0.0011191461660850215 0.0 0.0 39.91584020831041 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGTCA 20 7.0299144E-4 45.000004 6 GATCGGA 20 7.0299144E-4 45.000004 9 GTCGACG 20 7.0299144E-4 45.000004 1 CCCTATA 20 7.0299144E-4 45.000004 37 ATTACCG 20 7.0299144E-4 45.000004 1 GTAGGCG 40 6.8030204E-9 45.000004 1 TCGGCGT 20 7.0299144E-4 45.000004 4 CCTCCGG 20 7.0299144E-4 45.000004 2 ACGGCGC 20 7.0299144E-4 45.000004 10 ACGGAAT 20 7.0299144E-4 45.000004 5 CGGGCCG 20 7.0299144E-4 45.000004 6 CCAAGCG 20 7.0299144E-4 45.000004 20 TAGATCG 20 7.0299144E-4 45.000004 28 GCGTCGC 20 7.0299144E-4 45.000004 14 CGCTTCT 20 7.0299144E-4 45.000004 18 CGCCAGG 40 6.8030204E-9 45.000004 2 TGCAACG 20 7.0299144E-4 45.000004 1 GCGAGAC 35 1.210301E-7 45.0 21 CGGCGCT 25 3.8880113E-5 45.0 11 TTTACGG 45 3.8380676E-10 45.0 2 >>END_MODULE