##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551211_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 637219 Sequences flagged as poor quality 0 Sequence length 51 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.46392370597864 33.0 31.0 34.0 31.0 34.0 2 32.576377979940965 34.0 31.0 34.0 31.0 34.0 3 32.59479550986396 34.0 31.0 34.0 31.0 34.0 4 36.05916647180953 37.0 35.0 37.0 35.0 37.0 5 36.084354044684794 37.0 35.0 37.0 35.0 37.0 6 36.12439051566259 37.0 36.0 37.0 35.0 37.0 7 36.24282232639014 37.0 37.0 37.0 35.0 37.0 8 35.92767949480477 37.0 37.0 37.0 35.0 37.0 9 37.81809079766925 39.0 38.0 39.0 35.0 39.0 10 37.69268650181492 39.0 37.0 39.0 35.0 39.0 11 37.622881615268845 39.0 37.0 39.0 35.0 39.0 12 37.51034573670904 39.0 37.0 39.0 35.0 39.0 13 37.47096681046862 39.0 37.0 39.0 35.0 39.0 14 38.769713395237744 40.0 38.0 41.0 35.0 41.0 15 38.836753141384676 40.0 38.0 41.0 35.0 41.0 16 38.89935328356499 40.0 38.0 41.0 35.0 41.0 17 38.87736712182154 40.0 38.0 41.0 35.0 41.0 18 38.881031482112114 40.0 38.0 41.0 35.0 41.0 19 38.87015610017906 40.0 38.0 41.0 35.0 41.0 20 38.7842688306532 40.0 38.0 41.0 35.0 41.0 21 38.744149185758744 40.0 38.0 41.0 35.0 41.0 22 38.71953441438501 40.0 38.0 41.0 35.0 41.0 23 38.678360187000074 40.0 38.0 41.0 35.0 41.0 24 38.64897625463146 40.0 38.0 41.0 35.0 41.0 25 38.59639150747231 40.0 38.0 41.0 35.0 41.0 26 38.54933704111146 40.0 38.0 41.0 35.0 41.0 27 38.49401226266009 40.0 38.0 41.0 35.0 41.0 28 38.43339887856451 40.0 38.0 41.0 35.0 41.0 29 38.41738397630956 40.0 38.0 41.0 35.0 41.0 30 38.36525747035164 40.0 37.0 41.0 34.0 41.0 31 38.33096156894255 40.0 37.0 41.0 34.0 41.0 32 38.25343720133894 40.0 37.0 41.0 34.0 41.0 33 38.207248999166694 40.0 37.0 41.0 34.0 41.0 34 38.139421454790266 40.0 37.0 41.0 34.0 41.0 35 38.06883975524898 40.0 37.0 41.0 34.0 41.0 36 38.0248391840168 40.0 37.0 41.0 34.0 41.0 37 37.958810079423245 40.0 37.0 41.0 34.0 41.0 38 37.8827043763604 40.0 37.0 41.0 34.0 41.0 39 37.834490183123854 40.0 36.0 41.0 34.0 41.0 40 37.73733677118855 40.0 36.0 41.0 33.0 41.0 41 37.69989595413821 40.0 36.0 41.0 33.0 41.0 42 37.66058607794181 40.0 36.0 41.0 33.0 41.0 43 37.57680326543935 40.0 36.0 41.0 33.0 41.0 44 37.537758604184745 40.0 36.0 41.0 33.0 41.0 45 37.485778044910774 40.0 35.0 41.0 33.0 41.0 46 37.38207900266627 40.0 35.0 41.0 33.0 41.0 47 37.34126414937408 40.0 35.0 41.0 33.0 41.0 48 37.28854757940363 40.0 35.0 41.0 33.0 41.0 49 37.18346596695955 39.0 35.0 41.0 33.0 41.0 50 37.119046983847 39.0 35.0 41.0 33.0 41.0 51 36.37539370294985 38.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 6.0 10 13.0 11 8.0 12 10.0 13 10.0 14 21.0 15 20.0 16 40.0 17 62.0 18 116.0 19 176.0 20 384.0 21 674.0 22 1018.0 23 1453.0 24 1957.0 25 2489.0 26 3249.0 27 3939.0 28 4321.0 29 4857.0 30 6060.0 31 7689.0 32 10128.0 33 14290.0 34 29391.0 35 48406.0 36 35854.0 37 55667.0 38 108549.0 39 295695.0 40 665.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.258754054728435 21.394214547902685 24.25178784687839 11.09524355049049 2 32.0094033605401 25.25379814475086 25.27168838342862 17.465110111280424 3 32.31965776287274 24.703437907532575 26.054935587294164 16.92196874230053 4 28.818506667252546 25.606424165004498 26.663674498092494 18.911394669650466 5 26.095580954114677 31.069224238448633 23.68651907742864 19.14867573000805 6 26.482575064459784 36.01697375627532 22.703654473579725 14.796796705685173 7 81.35068163378682 6.3077215211724695 8.226057289566068 4.115539555474649 8 82.84530122297043 6.592082156997829 6.673843686393532 3.8887729336381995 9 76.354910948983 8.86304394564506 8.50382678482594 6.278218320545998 10 40.05624439949217 31.558224095640586 15.809164510160556 12.576366994706687 11 29.47510981310978 26.43015980377233 25.466911689701654 18.627818693416234 12 29.184628832473607 23.101476886282423 27.727202107909527 19.98669217333444 13 26.266322881144472 24.860212893840263 28.43637744637244 20.437086778642822 14 19.87307346453888 29.420968301321835 28.07559096637106 22.630367267768225 15 19.946988398023286 27.99461409656649 31.940981044193595 20.11741646121663 16 23.04655071490335 26.621302880171495 30.309830686153425 20.022315718771726 17 22.574499504879796 27.344759023192967 27.902808924404326 22.177932547522907 18 23.18119830074119 27.603696688265728 27.97515453870647 21.23995047228661 19 25.112402486429314 28.262183017141673 26.778077866479183 19.84733662994983 20 27.53982539754778 26.68721428582638 27.8814661835256 17.891494133100235 21 25.822519416401583 27.17182004930801 27.493216617834687 19.512443916455723 22 24.31173583964069 25.128880337843036 28.355871372322543 22.20351245019373 23 23.469953030276873 27.26252669804259 28.073080055679444 21.19444021600109 24 22.95286235972248 25.854376595801444 29.34061915919017 21.852141885285906 25 22.789025437094626 28.250413123274733 27.136510367707178 21.824051071923467 26 21.044570234095342 29.992985143255304 27.11344137572797 21.849003246921388 27 22.67634831980842 29.121699133265018 28.15845101919434 20.043501527732225 28 20.42107972298378 29.350662801956627 29.293696515640622 20.934560959418974 29 22.047522123477172 27.711351984168708 28.82478394398158 21.416341948372537 30 22.448640106462612 27.69848356687418 27.939060197514515 21.913816129148692 31 22.61781271431015 29.120443677919212 26.353106231923405 21.90863737584724 32 24.509783920441794 28.26798949811603 26.52934077609111 20.692885805351064 33 23.75368593842933 28.996938258275414 26.029669548459793 21.219706254835465 34 22.058507357752983 27.693618677409184 28.04106594436136 22.206808020476476 35 23.12925383580841 25.8474715913995 28.571495827964956 22.45177874482713 36 22.350557657571414 29.688066426142345 26.839281314587293 21.122094601698947 37 23.202541041619913 29.058141706383523 27.260643515023876 20.478673736972688 38 23.281163932651097 29.1016118477321 25.315629320531873 22.301594899084932 39 24.042126804128568 27.087547609220692 26.552880563824992 22.317445022825748 40 23.747565593618518 26.230699335707193 28.45866177876052 21.56307329191377 41 21.099810269310865 26.572340121685013 28.361363989460454 23.966485619543672 42 22.6181265781466 27.253581578703713 27.374889951492342 22.753401891657344 43 23.15546146615214 27.043920535953887 27.33424458467183 22.466373413222144 44 22.080163962468163 26.84508779556165 27.627236475999617 23.447511765970567 45 21.792978552114736 27.076876238781328 26.874120200433442 24.25602500867049 46 22.324820822982367 28.609787216012077 26.571241598257426 22.494150362748126 47 22.034025978509746 26.690039060354447 29.269999795988504 22.005935165147303 48 22.121593988879802 26.23556422517219 28.721993537543604 22.920848248404393 49 22.027120974107802 25.762100627884603 29.271255251334317 22.93952314667328 50 21.005023390702412 26.788121509245645 28.21777128428374 23.989083815768204 51 20.8444820383573 26.005031237298322 26.801146858458395 26.349339865885984 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 216.0 1 551.0 2 886.0 3 1812.0 4 2738.0 5 1898.5 6 1059.0 7 1056.5 8 1054.0 9 1037.0 10 1020.0 11 1022.0 12 1024.0 13 1063.5 14 1103.0 15 1051.0 16 999.0 17 1116.0 18 1233.0 19 1392.5 20 1552.0 21 1810.0 22 2068.0 23 2631.5 24 3195.0 25 3801.0 26 5411.0 27 6415.0 28 8014.5 29 9614.0 30 11144.5 31 12675.0 32 14771.5 33 16868.0 34 19109.5 35 21351.0 36 22623.0 37 23895.0 38 25673.0 39 27451.0 40 30386.0 41 33321.0 42 36183.5 43 39046.0 44 41627.0 45 44208.0 46 49684.0 47 55160.0 48 54040.0 49 52920.0 50 51424.0 51 49928.0 52 45456.0 53 40984.0 54 38214.5 55 35445.0 56 32184.5 57 28924.0 58 28614.0 59 28304.0 60 27499.5 61 26695.0 62 24281.5 63 21868.0 64 18538.5 65 15209.0 66 12251.5 67 9294.0 68 7520.5 69 5747.0 70 4675.5 71 3604.0 72 2880.0 73 2156.0 74 1961.0 75 1385.0 76 1004.0 77 713.5 78 423.0 79 345.5 80 268.0 81 166.0 82 64.0 83 46.5 84 29.0 85 22.5 86 16.0 87 11.0 88 6.0 89 4.5 90 3.0 91 2.0 92 1.0 93 1.5 94 2.0 95 1.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 637219.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.920096273816178 #Duplication Level Percentage of deduplicated Percentage of total 1 72.28249034348279 18.735691086142626 2 9.104442811181917 4.719760683705779 3 3.336053680866402 2.5941249774802793 4 1.743498863055434 1.807666335347436 5 1.0958241917512133 1.4201934274684125 6 0.8891818998490113 1.382860826941269 7 0.6861583465441856 1.2449703281055473 8 0.6085639728698533 1.2619229412450126 9 0.5681523314283717 1.3253906815934862 >10 9.298585915698157 57.03249600984739 >50 0.3392791050206723 5.216484853380976 >100 0.04225678383831479 2.010907130504236 >500 0.0030620857853851297 0.5063777823104288 >1k 0.002449668628308104 0.7411529359270822 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1429 0.22425571114483403 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCG 1109 0.1740374973125409 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGC 1102 0.1729389738849595 No Hit GCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTCTGC 1029 0.16148294385446763 No Hit GAATCTGTCTCTTATACACATCTGACGCTTAGACGGTCGTATGCCGTCTTC 909 0.1426511136673577 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 645 0.10122108725571587 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5693191822591606E-4 0.0 0.0 0.0899219891434499 0.0 2 1.5693191822591606E-4 0.0 0.0 0.4251285664740066 0.0 3 1.5693191822591606E-4 0.0 0.0 0.581432757027019 0.0 4 1.5693191822591606E-4 0.0 0.0 0.8237356387678334 0.0 5 1.5693191822591606E-4 0.0 0.0 1.5657097481399644 0.0 6 1.5693191822591606E-4 0.0 0.0 1.9828347867844494 0.0 7 1.5693191822591606E-4 0.0 0.0 2.366533326846814 0.0 8 1.5693191822591606E-4 0.0 0.0 2.9901807698766043 0.0 9 1.5693191822591606E-4 0.0 0.0 3.2580635542882432 0.0 10 1.5693191822591606E-4 0.0 0.0 4.048529626392182 0.0 11 1.5693191822591606E-4 0.0 0.0 4.931428598331186 0.0 12 1.5693191822591606E-4 0.0 0.0 5.835356447312463 0.0 13 1.5693191822591606E-4 0.0 0.0 6.139490504834288 0.0 14 1.5693191822591606E-4 0.0 0.0 6.27084252038938 0.0 15 1.5693191822591606E-4 0.0 0.0 6.521933589550845 0.0 16 1.5693191822591606E-4 0.0 0.0 7.012031970170381 0.0 17 1.5693191822591606E-4 0.0 0.0 7.5898552930782035 0.0 18 1.5693191822591606E-4 0.0 0.0 8.203772957177987 0.0 19 1.5693191822591606E-4 0.0 0.0 8.641926872864746 0.0 20 1.5693191822591606E-4 0.0 0.0 9.032373485410824 0.0 21 1.5693191822591606E-4 0.0 0.0 9.482297294964525 0.0 22 1.5693191822591606E-4 0.0 0.0 10.002683535801664 0.0 23 1.5693191822591606E-4 0.0 0.0 10.433304719413577 0.0 24 1.5693191822591606E-4 0.0 0.0 10.826105310733045 0.0 25 1.5693191822591606E-4 0.0 0.0 11.161625751900052 0.0 26 1.5693191822591606E-4 0.0 0.0 11.474077201087852 0.0 27 1.5693191822591606E-4 0.0 0.0 11.795159905778076 0.0 28 1.5693191822591606E-4 0.0 0.0 12.13240659804557 0.0 29 1.5693191822591606E-4 0.0 0.0 12.474361247859841 0.0 30 1.5693191822591606E-4 0.0 0.0 12.872183660562538 0.0 31 1.5693191822591606E-4 0.0 0.0 13.235481051255533 0.0 32 1.5693191822591606E-4 0.0 0.0 13.574297062705286 0.0 33 1.5693191822591606E-4 0.0 0.0 13.910602163463425 0.0 34 1.5693191822591606E-4 0.0 0.0 14.247534991894467 0.0 35 1.5693191822591606E-4 0.0 0.0 14.606438288877136 0.0 36 1.5693191822591606E-4 0.0 0.0 14.984644211801594 0.0 37 1.5693191822591606E-4 0.0 0.0 15.341664325765553 0.0 38 1.5693191822591606E-4 0.0 0.0 15.70025375891177 0.0 39 1.5693191822591606E-4 0.0 0.0 16.06025557932202 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCGTTAG 30 2.1639735E-6 45.000004 1 GGTCCGT 20 7.0309173E-4 45.0 8 CACGACA 20 7.0309173E-4 45.0 21 TATTCCG 25 3.8888422E-5 45.0 1 CGGTCGA 50 2.1827873E-11 45.0 41 CGTCACG 20 7.0309173E-4 45.0 37 ATACCGG 20 7.0309173E-4 45.0 2 ACGACAC 20 7.0309173E-4 45.0 22 GTGCCGG 20 7.0309173E-4 45.0 2 CAACGAG 55 6.002665E-11 40.909092 14 TCGTCCC 110 0.0 40.909092 38 CGTTAGG 105 0.0 40.714287 2 TAGTACG 50 1.0804797E-9 40.5 1 TACGGGA 320 0.0 40.078125 4 TGATCGG 40 3.4549885E-7 39.375 2 GAATGCG 40 3.4549885E-7 39.375 1 ATCCGGC 40 3.4549885E-7 39.375 6 AACGGGC 80 0.0 39.375 4 CTCGTCC 115 0.0 39.130432 37 CGGGTAC 35 6.2439085E-6 38.571426 6 >>END_MODULE