SRR3551210_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551210_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	655743
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG	6890	1.0507165154641376	No Hit
GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC	6632	1.011371833172447	No Hit
GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC	6508	0.9924619858694641	No Hit
GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC	2607	0.3975642896683609	No Hit
GAATGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCT	1541	0.23500060237013587	No Hit
GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAACTAGT	1493	0.22768066147865856	No Hit
AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC	1481	0.22585067625578922	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1454	0.22173320950433323	No Hit
GAATGATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTC	1029	0.15692123286104465	No Hit
GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTA	1027	0.15661623532389976	No Hit
AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	980	0.1494487932009949	No Hit
GAACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCT	973	0.1483813018209878	No Hit
GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT	957	0.1459413215238287	No Hit
CCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC	933	0.14228135107809003	No Hit
CTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGCT	920	0.14029886708664827	No Hit
GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA	865	0.13191143481516387	No Hit
AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG	670	0.10217417494353734	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTACG	20	7.0310675E-4	45.0	1
CTCGTAG	20	7.0310675E-4	45.0	1
CGCATCG	45	3.8380676E-10	45.0	21
TACGCGG	35	1.2108649E-7	45.0	2
TACGCAT	20	7.0310675E-4	45.0	27
CAAGCGT	35	1.2108649E-7	45.0	17
GACGAAT	35	1.2108649E-7	45.0	20
CGTCCAC	20	7.0310675E-4	45.0	11
ATTTCGA	20	7.0310675E-4	45.0	11
CCCGATC	35	1.2108649E-7	45.0	41
CTCGTGA	25	3.8889677E-5	44.999996	12
ACGGGTA	25	3.8889677E-5	44.999996	5
TATAGCG	25	3.8889677E-5	44.999996	1
CGACTTG	25	3.8889677E-5	44.999996	41
CGTAAGG	65	0.0	41.538464	2
TACGGCT	755	0.0	41.42384	7
TAACGCC	50	1.0804797E-9	40.499996	12
CCGCATC	50	1.0804797E-9	40.499996	20
TGCAACG	50	1.0804797E-9	40.499996	1
GATTGCG	45	1.9261279E-8	40.0	1