##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551210_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 655743 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.26584042833854 33.0 31.0 34.0 30.0 34.0 2 32.37705473028306 34.0 31.0 34.0 30.0 34.0 3 32.403552916310204 34.0 31.0 34.0 30.0 34.0 4 35.926971389706026 37.0 35.0 37.0 35.0 37.0 5 35.95378677317181 37.0 35.0 37.0 35.0 37.0 6 35.966061399054205 37.0 35.0 37.0 35.0 37.0 7 36.10271402058429 37.0 35.0 37.0 35.0 37.0 8 35.59794614658487 37.0 35.0 37.0 33.0 37.0 9 37.55276228644454 39.0 37.0 39.0 35.0 39.0 10 37.504626050144644 39.0 37.0 39.0 35.0 39.0 11 37.453040291699644 39.0 37.0 39.0 35.0 39.0 12 37.289012616223125 39.0 37.0 39.0 35.0 39.0 13 37.16618248307645 39.0 37.0 39.0 34.0 39.0 14 38.412100472288685 40.0 38.0 41.0 34.0 41.0 15 38.44104778853911 40.0 38.0 41.0 34.0 41.0 16 38.584106883336915 40.0 38.0 41.0 35.0 41.0 17 38.52761218953157 40.0 38.0 41.0 34.0 41.0 18 38.541424003001175 40.0 38.0 41.0 35.0 41.0 19 38.53799735567135 40.0 38.0 41.0 34.0 41.0 20 38.36187957782241 40.0 37.0 41.0 34.0 41.0 21 38.39218108313776 40.0 37.0 41.0 34.0 41.0 22 38.341455417747504 40.0 37.0 41.0 34.0 41.0 23 38.27917797063789 40.0 37.0 41.0 34.0 41.0 24 38.22844773028458 40.0 37.0 41.0 34.0 41.0 25 38.21854446025348 40.0 37.0 41.0 34.0 41.0 26 38.17234800828983 40.0 37.0 41.0 34.0 41.0 27 38.066137190942186 40.0 37.0 41.0 34.0 41.0 28 37.98127772618236 40.0 36.0 41.0 34.0 41.0 29 37.96370681806744 40.0 36.0 41.0 34.0 41.0 30 37.910939194166005 40.0 36.0 41.0 33.0 41.0 31 37.84656946395158 40.0 36.0 41.0 33.0 41.0 32 37.72146862414086 40.0 36.0 41.0 33.0 41.0 33 37.65161656319625 40.0 36.0 41.0 33.0 41.0 34 37.56122901807568 40.0 36.0 41.0 33.0 41.0 35 37.49724815972111 40.0 36.0 41.0 33.0 41.0 36 37.44042559356333 40.0 36.0 41.0 33.0 41.0 37 37.286484186640195 40.0 35.0 41.0 33.0 41.0 38 37.216299678380096 40.0 35.0 41.0 32.0 41.0 39 37.1777891643525 40.0 35.0 41.0 32.0 41.0 40 37.12143171943887 40.0 35.0 41.0 32.0 41.0 41 37.01953204227876 39.0 35.0 41.0 32.0 41.0 42 36.936135040709544 39.0 35.0 41.0 32.0 41.0 43 36.865878858028225 39.0 35.0 41.0 32.0 41.0 44 36.84958131463088 39.0 35.0 41.0 32.0 41.0 45 36.779715528797105 39.0 35.0 41.0 31.0 41.0 46 36.69183658841955 39.0 35.0 41.0 31.0 41.0 47 36.53577087365019 39.0 35.0 41.0 31.0 41.0 48 36.53519595329268 39.0 35.0 41.0 31.0 41.0 49 36.42743574845633 39.0 35.0 41.0 31.0 41.0 50 36.30717064459704 39.0 35.0 41.0 31.0 41.0 51 35.531388059041426 37.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 11.0 11 3.0 12 11.0 13 14.0 14 18.0 15 26.0 16 30.0 17 56.0 18 134.0 19 226.0 20 577.0 21 1191.0 22 1851.0 23 2448.0 24 3227.0 25 3805.0 26 4465.0 27 5163.0 28 5565.0 29 6630.0 30 8049.0 31 10112.0 32 13396.0 33 18410.0 34 35492.0 35 54721.0 36 42227.0 37 65146.0 38 115441.0 39 256798.0 40 495.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.796295194916304 21.04711754452583 22.183690866696253 10.97289639386162 2 31.403156419511912 29.774469571158214 22.22425553913652 16.598118470193356 3 31.044479315829527 28.337626173668646 23.567312193954034 17.050582316547793 4 28.488142458249648 23.920804339504958 29.223491520305974 18.367561681939417 5 29.116284885999544 28.788717531105934 22.405424076200582 19.689573506693932 6 24.677503229161424 37.585608996207355 23.204212625983047 14.532675148648174 7 74.66065211523417 6.890046862871582 13.400371791997777 5.048929229896468 8 73.22091124114174 11.39409799265871 9.489845869494603 5.895144896704959 9 67.27696673849358 9.17005595179819 11.333860979072593 12.21911633063563 10 42.188936824335144 24.203537056438268 18.741183664941904 14.86634245428468 11 32.78433776647254 24.764122529710573 22.788653481623136 19.662886222193755 12 29.035918034961867 21.542433544849125 27.225910150775533 22.195738269413475 13 26.32967488787528 24.556571705683478 29.6245632816515 19.489190124789744 14 19.94455144774706 30.695257135798627 26.95796981439375 22.402221602060564 15 18.876450072665662 25.96474533468142 34.260830843790934 20.89797374886198 16 20.853749105975968 26.16680620303991 29.730092429503628 23.24935226148049 17 21.033240156585737 26.971542204796695 27.95897173130327 24.0362459073143 18 21.609533003021 26.46753377466477 28.335491190908634 23.587442031405597 19 24.437927663734115 26.37527201967844 25.854641223772116 23.332159092815324 20 26.72540919232077 26.44923392243608 28.059620918561084 18.76573596668207 21 24.315013656264725 28.61425893985906 26.862048088961682 20.208679314914534 22 21.544873525146286 24.783184875782126 28.075938286798337 25.596003312273254 23 23.04302142760197 26.926402569299253 28.132362831170138 21.89821317192864 24 23.276192044749237 25.35658024561452 27.794578058782175 23.572649650854068 25 22.10622149226145 29.990560326225367 25.321658027611427 22.58156015390176 26 21.444529335425617 27.18153300912095 27.3456216841049 24.028315971348533 27 24.607048798080953 27.84032768935391 26.084609366779365 21.468014145785773 28 20.255191439329128 28.794817481848835 28.81464232176325 22.135348757058786 29 24.292138840978858 25.602713258090443 27.04687659647148 23.058271304459215 30 23.443025697567492 28.43202291141499 26.044044694339092 22.080906696678422 31 23.93910419173365 28.42211049145778 23.550232331873918 24.088552984934648 32 25.66950771872517 29.885336175910382 23.487707836759217 20.95744826860523 33 24.047835813725804 26.90703522569055 23.1502280619084 25.894900898675242 34 22.899672585143875 27.354619111450674 26.501083503750706 23.24462479965474 35 24.88444405811423 26.8774504645875 24.664388335064196 23.573717142234077 36 25.920673190563985 28.78261758036304 23.24447230088617 22.052236928186804 37 23.807040258149915 29.673820383900402 26.73013665414652 19.789002703803167 38 21.692797330661556 29.390172674355654 23.215345036088834 25.701684958893956 39 23.532542474719516 25.866231130183625 27.66007414490128 22.94115225019558 40 23.053696341402045 25.179224177764763 28.198852294267724 23.56822718656547 41 21.933135389931728 26.536310719290938 26.98450460012535 24.54604929065198 42 22.622124826342027 27.942654363066016 27.57025237021211 21.864968440379844 43 26.47119374511051 25.12722209768156 25.138354507787348 23.26322964942058 44 23.633649158283045 25.601035771636145 26.03885973620763 24.72645533387318 45 22.12192886542441 25.530581340555674 25.363442690200277 26.984047103819638 46 24.549709261097714 28.083410726458386 24.578989024663624 22.787890987780273 47 21.808848893545186 26.266692896454863 30.080382100914537 21.84407610908542 48 22.738633885531375 25.330197958651485 27.443068397222692 24.48809975859445 49 22.21037815119643 24.646240981604073 29.757389709078097 23.385991158121396 50 22.051016938038227 24.87254915416558 27.744405963921842 25.33202794387435 51 21.407624633431084 24.392635529468098 25.4828492259925 28.716890611108315 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 273.0 1 707.5 2 1142.0 3 1950.5 4 2759.0 5 1971.0 6 1183.0 7 1132.5 8 1082.0 9 1082.0 10 1082.0 11 1101.0 12 1120.0 13 1153.0 14 1186.0 15 1182.5 16 1179.0 17 1360.5 18 1542.0 19 1458.0 20 1374.0 21 2008.5 22 2643.0 23 2814.5 24 2986.0 25 3730.0 26 5686.0 27 6898.0 28 7815.5 29 8733.0 30 9521.5 31 10310.0 32 11930.0 33 13550.0 34 14286.5 35 15023.0 36 15925.5 37 16828.0 38 18041.5 39 19255.0 40 22989.0 41 26723.0 42 29678.0 43 32633.0 44 37337.0 45 42041.0 46 59159.5 47 76278.0 48 69007.5 49 61737.0 50 60154.5 51 58572.0 52 51527.0 53 44482.0 54 40313.0 55 36144.0 56 33388.0 57 30632.0 58 29896.0 59 29160.0 60 28387.0 61 27614.0 62 24977.0 63 22340.0 64 20251.0 65 18162.0 66 14976.5 67 11791.0 68 10107.0 69 8423.0 70 7209.0 71 5995.0 72 4696.5 73 3398.0 74 2754.0 75 1727.0 76 1344.0 77 1116.5 78 889.0 79 623.0 80 357.0 81 267.0 82 177.0 83 120.0 84 63.0 85 58.0 86 53.0 87 26.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 1.0 94 2.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 655743.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.385249675311716 #Duplication Level Percentage of deduplicated Percentage of total 1 71.69198021244165 18.916107976227803 2 11.044358505870786 5.828163133621067 3 3.991020785492637 3.1591223965374575 4 1.9771867291962064 2.0867426201821937 5 1.2164778038479902 1.6048535289502046 6 0.8233780489368928 1.3035021239022568 7 0.6431379897722351 1.1878549505072948 8 0.48404176947168376 1.0217250352632041 9 0.4082930898808526 0.9695623605489706 >10 7.211485655416807 47.344023166482984 >50 0.41637187037465034 6.6350966938888325 >100 0.07883618864036146 3.674249123646671 >500 0.007591632980182955 1.544522067241224 >1k 0.0040878023739446675 1.6382041718783615 >5k 0.0017519153031191434 3.08627065112148 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCG 6890 1.0507165154641376 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGC 6632 1.011371833172447 No Hit GAATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTC 6508 0.9924619858694641 No Hit GCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 2607 0.3975642896683609 No Hit GAATGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCT 1541 0.23500060237013587 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCGGAACTAGT 1493 0.22768066147865856 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 1481 0.22585067625578922 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1454 0.22173320950433323 No Hit GAATGATCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTC 1029 0.15692123286104465 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTA 1027 0.15661623532389976 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 980 0.1494487932009949 No Hit GAACTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCT 973 0.1483813018209878 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 957 0.1459413215238287 No Hit CCTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGC 933 0.14228135107809003 No Hit CTGTCTCTTATACACATCTGACGCGGAACTAGTCGTATGCCGTCTTCTGCT 920 0.14029886708664827 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 865 0.13191143481516387 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 670 0.10217417494353734 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.1459413215238287 0.0 2 0.0 0.0 0.0 0.8825103737287321 0.0 3 0.0 0.0 0.0 1.1724105327849477 0.0 4 0.0 0.0 0.0 1.750838361980227 0.0 5 0.0 0.0 0.0 3.940263182374802 0.0 6 0.0 0.0 0.0 4.668749799845366 0.0 7 0.0 0.0 0.0 5.539365269625447 0.0 8 0.0 0.0 0.0 6.605026664409685 0.0 9 0.0 0.0 0.0 7.018755823546725 0.0 10 0.0 0.0 0.0 8.9978848420799 0.0 11 0.0 0.0 0.0 10.323861634817298 0.0 12 1.5249876857244377E-4 0.0 0.0 12.342182836873592 0.0 13 1.5249876857244377E-4 0.0 0.0 12.816606505902465 0.0 14 1.5249876857244377E-4 0.0 0.0 13.027817300375299 0.0 15 1.5249876857244377E-4 0.0 0.0 13.539145671398703 0.0 16 1.5249876857244377E-4 0.0 0.0 14.244299977277683 0.0 17 1.5249876857244377E-4 0.0 0.0 15.008166309057055 0.0 18 1.5249876857244377E-4 0.0 0.0 15.830287170431099 0.0 19 1.5249876857244377E-4 0.0 0.0 16.557706296521655 0.0 20 1.5249876857244377E-4 0.0 0.0 17.10288939416814 0.0 21 1.5249876857244377E-4 0.0 0.0 17.703887041112143 0.0 22 1.5249876857244377E-4 0.0 0.0 18.392418981216725 0.0 23 1.5249876857244377E-4 0.0 0.0 18.981979220517793 0.0 24 1.5249876857244377E-4 0.0 0.0 19.47409274670107 0.0 25 1.5249876857244377E-4 0.0 0.0 19.92030414354404 0.0 26 1.5249876857244377E-4 0.0 0.0 20.332203317458212 0.0 27 1.5249876857244377E-4 0.0 0.0 20.81013445816425 0.0 28 1.5249876857244377E-4 0.0 0.0 21.23133605696134 0.0 29 1.5249876857244377E-4 0.0 0.0 21.670227512912835 0.0 30 1.5249876857244377E-4 0.0 0.0 22.168745987376152 0.0 31 1.5249876857244377E-4 0.0 0.0 22.636917206893553 0.0 32 1.5249876857244377E-4 0.0 0.0 23.128573236771114 0.0 33 1.5249876857244377E-4 0.0 0.0 23.584849552339865 0.0 34 1.5249876857244377E-4 0.0 0.0 24.015506074788448 0.0 35 3.0499753714488754E-4 0.0 0.0 24.4762048546458 0.0 36 3.0499753714488754E-4 0.0 0.0 24.928211204694524 0.0 37 3.0499753714488754E-4 0.0 0.0 25.392874952534758 0.0 38 3.0499753714488754E-4 0.0 0.0 25.80675661044037 0.0 39 3.0499753714488754E-4 0.0 0.0 26.25357800235763 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGTACG 20 7.0310675E-4 45.0 1 CTCGTAG 20 7.0310675E-4 45.0 1 CGCATCG 45 3.8380676E-10 45.0 21 TACGCGG 35 1.2108649E-7 45.0 2 TACGCAT 20 7.0310675E-4 45.0 27 CAAGCGT 35 1.2108649E-7 45.0 17 GACGAAT 35 1.2108649E-7 45.0 20 CGTCCAC 20 7.0310675E-4 45.0 11 ATTTCGA 20 7.0310675E-4 45.0 11 CCCGATC 35 1.2108649E-7 45.0 41 CTCGTGA 25 3.8889677E-5 44.999996 12 ACGGGTA 25 3.8889677E-5 44.999996 5 TATAGCG 25 3.8889677E-5 44.999996 1 CGACTTG 25 3.8889677E-5 44.999996 41 CGTAAGG 65 0.0 41.538464 2 TACGGCT 755 0.0 41.42384 7 TAACGCC 50 1.0804797E-9 40.499996 12 CCGCATC 50 1.0804797E-9 40.499996 20 TGCAACG 50 1.0804797E-9 40.499996 1 GATTGCG 45 1.9261279E-8 40.0 1 >>END_MODULE