##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551205_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 714146 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.32096798133715 33.0 31.0 34.0 30.0 34.0 2 32.42191652687266 34.0 31.0 34.0 30.0 34.0 3 32.445983034281504 34.0 31.0 34.0 30.0 34.0 4 35.942660184332055 37.0 35.0 37.0 35.0 37.0 5 35.98622130488724 37.0 35.0 37.0 35.0 37.0 6 36.01470007533474 37.0 35.0 37.0 35.0 37.0 7 36.13656311174466 37.0 36.0 37.0 35.0 37.0 8 35.80280362838971 37.0 35.0 37.0 35.0 37.0 9 37.66032996054028 39.0 38.0 39.0 35.0 39.0 10 37.570599009166195 39.0 37.0 39.0 35.0 39.0 11 37.48549036191479 39.0 37.0 39.0 35.0 39.0 12 37.33632898594965 39.0 37.0 39.0 35.0 39.0 13 37.25542536120065 39.0 37.0 39.0 34.0 39.0 14 38.47794288562843 40.0 38.0 41.0 34.0 41.0 15 38.55923718679374 40.0 38.0 41.0 35.0 41.0 16 38.606429217554954 40.0 38.0 41.0 35.0 41.0 17 38.6313246871088 40.0 38.0 41.0 35.0 41.0 18 38.621748213950646 40.0 38.0 41.0 35.0 41.0 19 38.6177714360929 40.0 38.0 41.0 35.0 41.0 20 38.551706513794095 40.0 38.0 41.0 35.0 41.0 21 38.46039325292027 40.0 37.0 41.0 34.0 41.0 22 38.45134468302 40.0 37.0 41.0 34.0 41.0 23 38.43659839864677 40.0 37.0 41.0 34.0 41.0 24 38.37227681734547 40.0 37.0 41.0 34.0 41.0 25 38.28034043458901 40.0 37.0 41.0 34.0 41.0 26 38.27231126408326 40.0 37.0 41.0 34.0 41.0 27 38.23028764426322 40.0 37.0 41.0 34.0 41.0 28 38.16936592797551 40.0 37.0 41.0 34.0 41.0 29 38.14490874415036 40.0 37.0 41.0 34.0 41.0 30 38.065107134955596 40.0 36.0 41.0 34.0 41.0 31 38.01455024602812 40.0 36.0 41.0 34.0 41.0 32 37.959917159796454 40.0 36.0 41.0 34.0 41.0 33 37.939826029971464 40.0 36.0 41.0 34.0 41.0 34 37.86550789334394 40.0 36.0 41.0 34.0 41.0 35 37.799070498189444 40.0 36.0 41.0 33.0 41.0 36 37.750784853517345 40.0 36.0 41.0 33.0 41.0 37 37.67698341795655 40.0 36.0 41.0 33.0 41.0 38 37.57655717458335 40.0 35.0 41.0 33.0 41.0 39 37.5319654524425 40.0 35.0 41.0 33.0 41.0 40 37.44764655966707 40.0 35.0 41.0 33.0 41.0 41 37.37785690881137 40.0 35.0 41.0 33.0 41.0 42 37.356004234428255 40.0 35.0 41.0 33.0 41.0 43 37.273838962901145 40.0 35.0 41.0 33.0 41.0 44 37.19311037238884 39.0 35.0 41.0 33.0 41.0 45 37.12120770822773 39.0 35.0 41.0 33.0 41.0 46 36.999617725227054 39.0 35.0 41.0 32.0 41.0 47 36.96440643789925 39.0 35.0 41.0 32.0 41.0 48 36.9057181584718 39.0 35.0 41.0 32.0 41.0 49 36.80758556373627 39.0 35.0 41.0 32.0 41.0 50 36.75822730926169 39.0 35.0 41.0 32.0 41.0 51 35.988611572423565 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 9.0 10 10.0 11 11.0 12 16.0 13 15.0 14 23.0 15 43.0 16 62.0 17 81.0 18 173.0 19 217.0 20 374.0 21 632.0 22 902.0 23 1297.0 24 2012.0 25 2874.0 26 4041.0 27 4959.0 28 5609.0 29 6593.0 30 8054.0 31 10369.0 32 13714.0 33 19246.0 34 38970.0 35 60758.0 36 46142.0 37 71406.0 38 125421.0 39 289569.0 40 537.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.850341526802644 21.586622343330355 22.426646652085147 13.136389477781854 2 32.18277495078038 25.049219627359108 23.538744178361288 19.22926124349923 3 32.58927446208478 23.47503171620369 25.805927639446274 18.12976618226525 4 29.911110613235948 25.67052115393771 24.30077323124403 20.11759500158231 5 25.622071677220067 30.21805065070728 23.42420177386697 20.735675898205688 6 27.018564831281 33.38084929412193 23.656927294978896 15.943658579618173 7 77.14220901608354 7.371181803160698 9.690175398307908 5.796433782447847 8 77.21138254642608 6.49755092096014 9.489096067190744 6.801970465423037 9 70.91449087441504 9.005021382182354 12.309387716237296 7.771100027165313 10 42.39217190882537 24.029820232837544 18.552088788567044 15.025919069770048 11 31.003604305002057 25.239796904274474 23.191616280144398 20.564982510579068 12 29.653740271597123 22.559532644585282 27.186457671120472 20.600269412697124 13 25.51873146387433 25.165862442693793 28.389993082646964 20.92541301078491 14 20.42607534033657 28.497674145062774 28.248145337227964 22.82810517737269 15 20.17808683378469 26.273759147289212 32.78741321802545 20.760740800900656 16 22.268695756890047 26.467977136327864 30.68868270633736 20.57464440044473 17 22.171236693897324 25.86543927992315 26.74859202460001 25.21473200157951 18 23.995373495055635 25.811248680241857 28.178271669938642 22.01510615476387 19 26.02675083246283 25.701607234375047 26.187362248055717 22.084279685106406 20 26.3791997714753 26.419107577442148 26.553953953393282 20.64773869768927 21 25.2469383011317 26.616406169046662 27.92678247865282 20.20987305116881 22 23.85058517446012 25.23559608259375 26.60408375878322 24.309734984162905 23 23.553447054243808 25.59938724014417 27.281536268494115 23.5656294371179 24 23.482593195228986 24.733737919136985 28.245764871608888 23.537904014025145 25 23.44156517014728 26.25961638096412 26.349513964931543 23.94930448395706 26 21.2163899258695 27.128346304537164 26.454674534338917 25.200589235254416 27 22.681356473326183 26.764835201765464 27.433746040725566 23.120062284182787 28 21.252236937544982 27.435846451565926 27.352530154898297 23.959386455990792 29 21.555396235503665 27.108742470027135 26.658974495411304 24.676886799057897 30 22.17795800858648 26.509985353135075 26.46713697199172 24.844919666286724 31 22.609102340417785 28.5970935915065 24.814533722796178 23.979270345279538 32 22.90932106319996 28.758965253603602 24.587269269869186 23.744444413327248 33 22.18635965194792 28.460566886883075 23.810257286325207 25.542816174843804 34 20.51303234912749 27.92230160219339 27.180576520767463 24.38408952791166 35 22.455352266903404 25.86095840346372 26.000005601095573 25.683683728537304 36 22.032329523654827 28.33468226385081 23.990052454260052 25.64293575823431 37 22.514863907380285 28.47470965320817 26.14843463381437 22.861991805597174 38 21.897343120314332 29.566083125859414 24.750681233249225 23.785892520577026 39 22.64971028333142 26.2022051513276 26.569777048390662 24.578307516950314 40 23.237265209074895 24.23019942700792 28.800273333464027 23.732262030453157 41 20.59046749544211 24.594270639337054 27.502219434121315 27.31304243109952 42 22.233828936940064 25.05314039426112 26.18260131681757 26.53042935198125 43 22.903299885457596 25.063782475852275 26.28930218750788 25.74361545118225 44 21.72889017091743 26.173499536509343 26.28286092759744 25.814749364975793 45 22.491339305968246 24.706432578212297 26.220968821501483 26.581259294317967 46 21.853654574834838 26.844370758920444 25.952676343492787 25.349298322751928 47 21.353196685271637 26.0147084769781 28.318439086685355 24.313655751064907 48 21.23487354126467 24.7445200281175 27.450829382227166 26.569777048390662 49 21.391704217344913 24.698170962240216 28.93792025720231 24.972204563212564 50 20.764661567802662 24.41475552618092 28.38411193229396 26.436470973722457 51 20.441898435333954 24.92417516866299 26.04901518737065 28.58491120863241 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 396.0 1 972.5 2 1549.0 3 2139.5 4 2730.0 5 1988.5 6 1247.0 7 1224.0 8 1201.0 9 1198.0 10 1195.0 11 1180.5 12 1166.0 13 1341.5 14 1517.0 15 1342.5 16 1168.0 17 1208.0 18 1248.0 19 1320.5 20 1393.0 21 1790.0 22 2187.0 23 2360.5 24 2534.0 25 3090.0 26 4678.0 27 5710.0 28 6674.5 29 7639.0 30 9157.0 31 10675.0 32 11815.0 33 12955.0 34 14048.0 35 15141.0 36 17272.0 37 19403.0 38 20767.5 39 22132.0 40 25899.0 41 29666.0 42 33522.0 43 37378.0 44 41812.0 45 46246.0 46 52208.5 47 58171.0 48 64719.0 49 71267.0 50 69768.0 51 68269.0 52 60384.5 53 52500.0 54 46736.5 55 40973.0 56 38042.5 57 35112.0 58 34242.0 59 33372.0 60 32516.0 61 31660.0 62 29682.0 63 27704.0 64 24564.5 65 21425.0 66 18360.5 67 15296.0 68 13442.0 69 11588.0 70 9207.5 71 6827.0 72 5489.5 73 4152.0 74 3499.5 75 2020.5 76 1194.0 77 1180.0 78 1166.0 79 698.5 80 231.0 81 229.0 82 227.0 83 128.5 84 30.0 85 17.0 86 4.0 87 4.5 88 5.0 89 4.0 90 3.0 91 2.0 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 714146.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 26.34884724561935 #Duplication Level Percentage of deduplicated Percentage of total 1 71.3927073023754 18.811155391615028 2 10.996524774443571 5.7949150302896495 3 4.12852202982366 3.2634538894199387 4 2.035195011093932 2.1450016984944233 5 1.2061216925744338 1.588995811863581 6 0.8281204407812554 1.3092011397072156 7 0.6234262314799958 1.1498593779524977 8 0.5152732877838192 1.086148571965113 9 0.42102290237643814 0.9984121327461669 >10 7.094648761026955 47.49502691505588 >50 0.6724956323888703 10.645985287170575 >100 0.07734774046643825 3.574750354067538 >500 0.006445645038869854 1.146529915998936 >1k 0.0021485483462899513 0.9905644836534444 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 2308 0.32318321463678296 Illumina Single End Adapter 1 (95% over 21bp) CCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 2049 0.28691612079322715 Illumina Single End Adapter 1 (95% over 21bp) CTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGCT 1325 0.18553629089849974 Illumina Single End Adapter 1 (95% over 22bp) CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1317 0.1844160717836409 No Hit TCTGTCTCTTATACACATCTGACGCCCAAATGCTCGTATGCCGTCTTCTGC 920 0.12882519820876964 Illumina Single End Adapter 1 (95% over 21bp) ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC 899 0.1258846230322651 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 826 0.11566262360917796 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.400273893573583E-4 0.0 0.0 0.1914174412515088 0.0 2 1.400273893573583E-4 0.0 0.0 1.0572067896480553 0.0 3 1.400273893573583E-4 0.0 0.0 1.4834501628518537 0.0 4 1.400273893573583E-4 0.0 0.0 1.9983308735188603 0.0 5 1.400273893573583E-4 0.0 0.0 3.457836352790606 0.0 6 1.400273893573583E-4 0.0 0.0 4.322225427293579 0.0 7 1.400273893573583E-4 0.0 0.0 5.107078944641572 0.0 8 1.400273893573583E-4 0.0 0.0 6.273787152767081 0.0 9 1.400273893573583E-4 0.0 0.0 6.758421947332899 0.0 10 1.400273893573583E-4 0.0 0.0 7.751916274823356 0.0 11 1.400273893573583E-4 0.0 0.0 9.112002307651377 0.0 12 1.400273893573583E-4 0.0 0.0 10.15506633097434 0.0 13 1.400273893573583E-4 0.0 0.0 10.607214771209248 0.0 14 2.800547787147166E-4 0.0 0.0 10.790370596488673 0.0 15 2.800547787147166E-4 0.0 0.0 11.15416175403909 0.0 16 2.800547787147166E-4 0.0 0.0 11.848417550472872 0.0 17 2.800547787147166E-4 0.0 0.0 12.61758800021284 0.0 18 2.800547787147166E-4 0.0 0.0 13.4721751574608 0.0 19 2.800547787147166E-4 0.0 0.0 13.966191787113559 0.0 20 2.800547787147166E-4 0.0 0.0 14.488774004195221 0.0 21 4.200821680720749E-4 0.0 0.0 15.102233996969808 0.0 22 4.200821680720749E-4 0.0 0.0 15.755881850489956 0.0 23 4.200821680720749E-4 0.0 0.0 16.358699761673382 0.0 24 4.200821680720749E-4 0.0 0.0 16.873300417561676 0.0 25 5.601095574294332E-4 0.0 0.0 17.342252144519467 0.0 26 5.601095574294332E-4 0.0 0.0 17.7815180649335 0.0 27 7.001369467867915E-4 0.0 0.0 18.201600233005575 0.0 28 7.001369467867915E-4 0.0 0.0 18.62504305842223 0.0 29 7.001369467867915E-4 0.0 0.0 19.038123857026434 0.0 30 7.001369467867915E-4 0.0 0.0 19.5275195828304 0.0 31 7.001369467867915E-4 0.0 0.0 19.9793879682866 0.0 32 8.401643361441497E-4 0.0 0.0 20.460662105507836 0.0 33 8.401643361441497E-4 0.0 0.0 20.887885670437136 0.0 34 8.401643361441497E-4 0.0 0.0 21.32449107045338 0.0 35 8.401643361441497E-4 0.0 0.0 21.783920934934873 0.0 36 8.401643361441497E-4 0.0 0.0 22.237609676452713 0.0 37 8.401643361441497E-4 0.0 0.0 22.688497870183408 0.0 38 8.401643361441497E-4 0.0 0.0 23.125943434535795 0.0 39 8.401643361441497E-4 0.0 0.0 23.57403108047934 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTGTACG 30 2.1643427E-6 45.000004 1 GTTAACG 30 2.1643427E-6 45.000004 1 TCGCACG 25 3.8893162E-5 45.0 1 GATCGTA 20 7.0314907E-4 45.0 10 TAAGTCG 20 7.0314907E-4 45.0 43 ATCGTAA 20 7.0314907E-4 45.0 11 CGAATCG 20 7.0314907E-4 45.0 24 CGAATAT 105 0.0 45.0 14 CTCGAAT 20 7.0314907E-4 45.0 11 ATAACGG 25 3.8893162E-5 45.0 2 ATAACGC 40 6.8084773E-9 45.0 11 TTCGCAA 40 6.8084773E-9 45.0 14 ACGAGAT 20 7.0314907E-4 45.0 43 CGTCAAT 25 3.8893162E-5 45.0 36 CAATACG 20 7.0314907E-4 45.0 20 ATACCCG 20 7.0314907E-4 45.0 22 TCGAAAC 20 7.0314907E-4 45.0 21 CTAGCGT 25 3.8893162E-5 45.0 14 TAACGGG 170 0.0 43.676468 3 ATAGCGG 65 0.0 41.538464 2 >>END_MODULE