##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551197_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 380109 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.36264334703993 33.0 31.0 34.0 30.0 34.0 2 32.45804229839336 34.0 31.0 34.0 31.0 34.0 3 32.47665801125466 34.0 31.0 34.0 30.0 34.0 4 35.976782975409684 37.0 35.0 37.0 35.0 37.0 5 36.02061777016593 37.0 35.0 37.0 35.0 37.0 6 36.05300584832246 37.0 35.0 37.0 35.0 37.0 7 36.19282889907895 37.0 37.0 37.0 35.0 37.0 8 35.83624434043919 37.0 35.0 37.0 35.0 37.0 9 37.73551796984549 39.0 38.0 39.0 35.0 39.0 10 37.6603000718215 39.0 37.0 39.0 35.0 39.0 11 37.57632415964894 39.0 37.0 39.0 35.0 39.0 12 37.361769913366956 39.0 37.0 39.0 35.0 39.0 13 37.237937012804224 39.0 37.0 39.0 34.0 39.0 14 38.473545746088625 40.0 38.0 41.0 34.0 41.0 15 38.57031009526215 40.0 38.0 41.0 35.0 41.0 16 38.63816431602514 40.0 38.0 41.0 35.0 41.0 17 38.65232867414347 40.0 38.0 41.0 35.0 41.0 18 38.64685655956581 40.0 38.0 41.0 35.0 41.0 19 38.634623226495556 40.0 37.0 41.0 35.0 41.0 20 38.55333601677414 40.0 37.0 41.0 35.0 41.0 21 38.49230878511164 40.0 37.0 41.0 35.0 41.0 22 38.44701388285991 40.0 37.0 41.0 35.0 41.0 23 38.425522679021014 40.0 37.0 41.0 35.0 41.0 24 38.36290906029586 40.0 37.0 41.0 34.0 41.0 25 38.29076133424886 40.0 37.0 41.0 34.0 41.0 26 38.24717646780265 40.0 37.0 41.0 34.0 41.0 27 38.20807189516691 40.0 36.0 41.0 34.0 41.0 28 38.13641876409135 40.0 36.0 41.0 34.0 41.0 29 38.1337432157618 40.0 36.0 41.0 34.0 41.0 30 38.04979624265671 40.0 36.0 41.0 34.0 41.0 31 37.95193220891902 40.0 36.0 41.0 34.0 41.0 32 37.857151501279894 40.0 36.0 41.0 34.0 41.0 33 37.8231112654528 40.0 36.0 41.0 34.0 41.0 34 37.71172479472993 40.0 36.0 41.0 34.0 41.0 35 37.639103520306016 40.0 35.0 41.0 33.0 41.0 36 37.5685790128621 40.0 35.0 41.0 33.0 41.0 37 37.48161711509067 40.0 35.0 41.0 33.0 41.0 38 37.410442794040655 40.0 35.0 41.0 33.0 41.0 39 37.36749458707897 40.0 35.0 41.0 33.0 41.0 40 37.25464011638767 39.0 35.0 41.0 33.0 41.0 41 37.17477355179698 39.0 35.0 41.0 33.0 41.0 42 37.148525817594425 39.0 35.0 41.0 33.0 41.0 43 37.063076643804806 39.0 35.0 41.0 33.0 41.0 44 36.99157346971526 39.0 35.0 41.0 33.0 41.0 45 36.959240638869375 39.0 35.0 41.0 32.0 41.0 46 36.85233183113265 39.0 35.0 41.0 32.0 41.0 47 36.79579015492924 39.0 35.0 41.0 32.0 41.0 48 36.7646517183229 39.0 35.0 41.0 32.0 41.0 49 36.67576668797634 39.0 35.0 41.0 32.0 41.0 50 36.601798431502544 39.0 35.0 41.0 32.0 41.0 51 35.79301726609999 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 8.0 10 6.0 11 8.0 12 5.0 13 13.0 14 10.0 15 13.0 16 35.0 17 44.0 18 82.0 19 151.0 20 211.0 21 351.0 22 546.0 23 793.0 24 1141.0 25 1730.0 26 2321.0 27 2722.0 28 3180.0 29 3675.0 30 4136.0 31 5380.0 32 7308.0 33 10168.0 34 20933.0 35 35848.0 36 23968.0 37 35654.0 38 67260.0 39 152079.0 40 328.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.2939209542526 20.646446150972483 23.12599806897495 13.933634825799967 2 32.73297922438038 24.974941398388356 24.491658971505544 17.800420405725724 3 32.24127815968578 24.34038657332502 26.36533204949107 17.053003217498137 4 29.879850253479923 25.28222167851853 25.16751773833295 19.670410329668595 5 25.70499514612914 29.25371406622837 24.256463277638783 20.78482751000371 6 25.249599456997863 34.381716823332255 24.281456108642523 16.087227611027362 7 77.15102773151912 7.058238557887344 10.350715189590353 5.440018521003186 8 76.62381053855604 6.96589662438932 9.954776130004813 6.45551670704982 9 70.95990886824569 8.557545335680029 12.670312989168897 7.812232806905388 10 42.03162776992915 23.660581570023336 19.38838596297378 14.919404697073734 11 32.79033119447317 23.934187298906366 23.755028162974305 19.520453343646167 12 30.783538406088777 22.154697731440194 27.65522521171559 19.406538650755444 13 24.65845323315154 26.35323025763662 29.216093278506953 19.772223230704878 14 19.92191713429569 29.541263163987175 28.281361398967135 22.25545830275 15 18.423399603797858 26.99436214349042 34.610072373976934 19.972165878734785 16 20.611982352430484 24.640563627801498 32.55566166546964 22.19179235429837 17 21.006605999857936 25.23907615973313 27.754144206004067 26.000173634404867 18 21.990271211678756 25.841798010570656 29.61703090429324 22.55089987345735 19 24.366431734055233 26.883341357347497 27.161682569999655 21.58854433859761 20 26.431102657395645 25.88441736449282 27.809917681507144 19.874562296604395 21 25.20329694903304 26.674980071505804 27.864638827283756 20.257084152177402 22 22.278346474300793 25.070966485929034 26.924119134248336 25.726567905521836 23 22.452507044032107 26.20800875538332 27.900418037983844 23.439066162600728 24 23.471688384121396 24.05704679447211 29.680170687881635 22.791094133524858 25 21.774017452888515 26.980681857046267 27.082757840514166 24.16254284955105 26 20.566469091760524 28.641258165420968 27.349260343743502 23.443012399075002 27 23.254119213173063 27.74256857901286 28.017752802485603 20.985559405328473 28 19.40995872236648 26.601580073084303 31.741421539611007 22.247039664938214 29 21.512513515859926 26.240894059335613 29.568360654443858 22.678231770360608 30 23.652162932211553 26.36691054408078 27.934092589230985 22.04683393447669 31 24.369062558371414 26.70681304573162 26.775740642815617 22.14838375308135 32 24.607415241417595 27.848064634091802 26.864925587134213 20.67959453735639 33 26.162495494713355 26.428734915511075 26.061998005835168 21.346771583940395 34 21.566971579204914 26.14039657045742 29.35289614294847 22.939735707389197 35 24.79604534488791 24.30934284639406 28.02169903895988 22.87291276975815 36 26.192486891917845 26.46635570323249 26.690238852539665 20.650918552309996 37 23.267799499617215 26.690501934971284 30.634633749792822 19.40706481561868 38 23.58876006619154 25.78181521616168 27.808076104485817 22.82134861316096 39 25.119110570915186 23.971545004196166 29.320273921427802 21.58907050346085 40 25.31642239462891 23.910772962492338 29.510745601919446 21.2620590409593 41 22.052095583109054 25.084383689941568 28.35028899605113 24.51323173089824 42 24.28171919107414 24.779997316559196 27.680218042719325 23.25806544964734 43 25.571086188435423 23.57586902704224 28.02432986327606 22.828714921246274 44 22.718746464829824 25.211978669276448 28.738861747551358 23.33041311834237 45 23.433015266673507 24.637406638622082 27.421344930006917 24.508233164697497 46 24.125974391556106 25.60397149238771 28.00433559847307 22.265718517583114 47 22.997876924776843 24.48850198232612 30.647261706510502 21.866359386386534 48 23.43853999773749 22.805563667263865 29.680433770313254 24.07546256468539 49 23.007874057178334 22.495652562817508 30.794587868216748 23.701885511787406 50 21.352559397436 23.892094109847438 30.457842355745324 24.297504136971238 51 21.673256881578705 23.44327548150662 26.950427377410165 27.93304025950451 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 200.0 1 609.0 2 1018.0 3 1510.5 4 2003.0 5 1425.0 6 847.0 7 816.0 8 785.0 9 769.5 10 754.0 11 816.5 12 879.0 13 843.0 14 807.0 15 796.5 16 786.0 17 815.5 18 845.0 19 803.5 20 762.0 21 1292.5 22 1823.0 23 1714.5 24 1606.0 25 2002.0 26 2706.0 27 3014.0 28 3490.0 29 3966.0 30 5110.0 31 6254.0 32 6871.0 33 7488.0 34 8757.0 35 10026.0 36 9880.0 37 9734.0 38 10567.0 39 11400.0 40 13455.0 41 15510.0 42 17899.0 43 20288.0 44 23285.0 45 26282.0 46 29788.5 47 33295.0 48 35236.5 49 37178.0 50 38005.0 51 38832.0 52 33105.5 53 27379.0 54 24196.0 55 21013.0 56 20100.0 57 19187.0 58 18038.0 59 16889.0 60 16319.0 61 15749.0 62 14700.5 63 13652.0 64 11757.5 65 9863.0 66 8287.5 67 6712.0 68 5304.0 69 3896.0 70 3472.0 71 3048.0 72 2345.0 73 1642.0 74 1476.5 75 852.5 76 394.0 77 428.5 78 463.0 79 284.5 80 106.0 81 62.0 82 18.0 83 11.5 84 5.0 85 3.0 86 1.0 87 0.5 88 0.0 89 0.5 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 380109.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.110152899362642 #Duplication Level Percentage of deduplicated Percentage of total 1 69.65704478305122 18.884131345862695 2 11.859214133431069 6.430102168471976 3 4.269758316921174 3.47261402445175 4 2.133617888809659 2.313708287777807 5 1.2937116958547152 1.7536360941157534 6 0.8914036287726502 1.4499653202643947 7 0.6927575383438074 1.3146533950680688 8 0.5709757723303442 1.2383392391765846 9 0.4811369086646076 1.173932564348177 >10 7.725142151200921 50.31321234711764 >50 0.34438222536116286 5.740849536716219 >100 0.07187107311885138 3.7312545211767336 >500 0.004991046744364679 0.7387819004070556 >1k 0.0039928373954917435 1.444819255045154 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 1655 0.43540142432828477 No Hit GCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 1621 0.4264566216532626 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1048 0.27571038833597733 No Hit CTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGCT 1015 0.2670286680925735 Illumina Single End Adapter 2 (95% over 21bp) GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 624 0.16416343732981856 No Hit GAATCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTC 538 0.14153834821064484 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCC 534 0.14048601848417167 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCG 528 0.13890752389446184 No Hit TCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGCCGTCTTCTGC 506 0.13311971039885928 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCAGTTGTGGTCGTATGC 476 0.1252272374503103 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 438 0.11523010504881494 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 411 0.10812687939512086 No Hit ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC 402 0.1057591375105562 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.2749211410411224 0.0 2 2.63082431618299E-4 0.0 0.0 1.403544772683625 0.0 3 2.63082431618299E-4 0.0 0.0 1.8713053361009606 0.0 4 2.63082431618299E-4 0.0 0.0 2.381159088577224 0.0 5 2.63082431618299E-4 0.0 0.0 3.9941174768290146 0.0 6 2.63082431618299E-4 0.0 0.0 4.830193444511969 0.0 7 2.63082431618299E-4 0.0 0.0 5.639961169033093 0.0 8 2.63082431618299E-4 0.0 0.0 6.7675324709491225 0.0 9 2.63082431618299E-4 0.0 0.0 7.219771170900978 0.0 10 2.63082431618299E-4 0.0 0.0 8.37496612813693 0.0 11 2.63082431618299E-4 0.0 0.0 9.911630611219413 0.0 12 2.63082431618299E-4 0.0 0.0 11.178372519461522 0.0 13 2.63082431618299E-4 0.0 0.0 11.637714445067074 0.0 14 2.63082431618299E-4 0.0 0.0 11.843444906592582 0.0 15 2.63082431618299E-4 0.0 0.0 12.2520119228958 0.0 16 2.63082431618299E-4 0.0 0.0 13.021264952947707 0.0 17 2.63082431618299E-4 0.0 0.0 13.927057765009511 0.0 18 2.63082431618299E-4 0.0 0.0 14.895727278228087 0.0 19 2.63082431618299E-4 0.0 0.0 15.459249846754483 0.0 20 5.26164863236598E-4 0.0 0.0 15.994096430234485 0.0 21 5.26164863236598E-4 0.0 0.0 16.647067025511102 0.0 22 5.26164863236598E-4 0.0 0.0 17.342920057141505 0.0 23 5.26164863236598E-4 0.0 0.0 18.035616099592485 0.0 24 5.26164863236598E-4 0.0 0.0 18.608872718088758 0.0 25 5.26164863236598E-4 0.0 0.0 19.111886327342948 0.0 26 5.26164863236598E-4 0.0 0.0 19.550970905713886 0.0 27 5.26164863236598E-4 0.0 0.0 19.996895627306905 0.0 28 5.26164863236598E-4 0.0 0.0 20.442294184036683 0.0 29 5.26164863236598E-4 0.0 0.0 20.890849729945884 0.0 30 5.26164863236598E-4 0.0 0.0 21.39386333920007 0.0 31 5.26164863236598E-4 0.0 0.0 21.8471543688784 0.0 32 5.26164863236598E-4 0.0 0.0 22.328858301171508 0.0 33 5.26164863236598E-4 0.0 0.0 22.794251122704278 0.0 34 5.26164863236598E-4 0.0 0.0 23.241754338887002 0.0 35 5.26164863236598E-4 0.0 0.0 23.711356479325666 0.0 36 5.26164863236598E-4 0.0 0.0 24.169382992773127 0.0 37 5.26164863236598E-4 0.0 0.0 24.646088358865484 0.0 38 5.26164863236598E-4 0.0 0.0 25.081489783193767 0.0 39 5.26164863236598E-4 0.0 0.0 25.519785114269855 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCCCGTG 30 2.1616543E-6 45.000004 18 GTCTTAC 30 2.1616543E-6 45.000004 31 TATACGG 30 2.1616543E-6 45.000004 2 CGGGTAC 20 7.027323E-4 45.0 6 ACACGCG 25 3.8858623E-5 45.0 36 CGTATGG 25 3.8858623E-5 45.0 2 CACGCCC 20 7.027323E-4 45.0 44 ATCGTTA 20 7.027323E-4 45.0 33 ATCGTAG 20 7.027323E-4 45.0 1 TAGTTAG 20 7.027323E-4 45.0 1 CAGGGTA 50 2.1827873E-11 45.0 5 CGTTAAG 20 7.027323E-4 45.0 35 AACGGCA 25 3.8858623E-5 45.0 40 GTTAACG 25 3.8858623E-5 45.0 1 ACTACGA 20 7.027323E-4 45.0 30 TACTAGA 20 7.027323E-4 45.0 30 TTACGCG 50 2.1827873E-11 45.0 1 AACTCGA 20 7.027323E-4 45.0 25 TCCCCGT 20 7.027323E-4 45.0 17 AATAGCG 20 7.027323E-4 45.0 1 >>END_MODULE