##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551194_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 655066 Sequences flagged as poor quality 0 Sequence length 51 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.41604662736274 33.0 31.0 34.0 31.0 34.0 2 32.51021271139091 34.0 31.0 34.0 31.0 34.0 3 32.527113298507324 34.0 31.0 34.0 31.0 34.0 4 36.01007990034592 37.0 35.0 37.0 35.0 37.0 5 36.04705480058498 37.0 35.0 37.0 35.0 37.0 6 36.081912356922814 37.0 36.0 37.0 35.0 37.0 7 36.210881040994344 37.0 37.0 37.0 35.0 37.0 8 35.885680221534926 37.0 36.0 37.0 35.0 37.0 9 37.760398188884785 39.0 38.0 39.0 35.0 39.0 10 37.656240745207356 39.0 37.0 39.0 35.0 39.0 11 37.578734051225375 39.0 37.0 39.0 35.0 39.0 12 37.41410941798231 39.0 37.0 39.0 35.0 39.0 13 37.35618243047266 39.0 37.0 39.0 35.0 39.0 14 38.6075861058275 40.0 38.0 41.0 35.0 41.0 15 38.69454680902383 40.0 38.0 41.0 35.0 41.0 16 38.734642005538376 40.0 38.0 41.0 35.0 41.0 17 38.73949037196252 40.0 38.0 41.0 35.0 41.0 18 38.73017375348438 40.0 38.0 41.0 35.0 41.0 19 38.717475796331975 40.0 38.0 41.0 35.0 41.0 20 38.664507087835425 40.0 38.0 41.0 35.0 41.0 21 38.59935029447414 40.0 38.0 41.0 35.0 41.0 22 38.584306008860175 40.0 38.0 41.0 35.0 41.0 23 38.55586917959412 40.0 37.0 41.0 35.0 41.0 24 38.49915123056303 40.0 37.0 41.0 35.0 41.0 25 38.40365550952118 40.0 37.0 41.0 34.0 41.0 26 38.394839603948306 40.0 37.0 41.0 35.0 41.0 27 38.342312072371335 40.0 37.0 41.0 34.0 41.0 28 38.29021197864032 40.0 37.0 41.0 34.0 41.0 29 38.26660672359732 40.0 37.0 41.0 34.0 41.0 30 38.18000934257006 40.0 37.0 41.0 34.0 41.0 31 38.14180861165134 40.0 37.0 41.0 34.0 41.0 32 38.07013644426669 40.0 36.0 41.0 34.0 41.0 33 38.0156335392159 40.0 36.0 41.0 34.0 41.0 34 37.94530169479106 40.0 36.0 41.0 34.0 41.0 35 37.86064915596291 40.0 36.0 41.0 34.0 41.0 36 37.81176095233152 40.0 36.0 41.0 34.0 41.0 37 37.76924920542358 40.0 36.0 41.0 34.0 41.0 38 37.67009125798011 40.0 35.0 41.0 33.0 41.0 39 37.609807256062744 40.0 35.0 41.0 33.0 41.0 40 37.51104621519053 40.0 35.0 41.0 33.0 41.0 41 37.46385402386935 40.0 35.0 41.0 33.0 41.0 42 37.43321741626035 40.0 35.0 41.0 33.0 41.0 43 37.36578146324187 40.0 35.0 41.0 33.0 41.0 44 37.287334405998784 39.0 35.0 41.0 33.0 41.0 45 37.21046886878574 39.0 35.0 41.0 33.0 41.0 46 37.054809744361634 39.0 35.0 41.0 33.0 41.0 47 37.01704561067129 39.0 35.0 41.0 33.0 41.0 48 36.96020095685015 39.0 35.0 41.0 33.0 41.0 49 36.8645037293952 39.0 35.0 41.0 32.0 41.0 50 36.811347253559184 39.0 35.0 41.0 32.0 41.0 51 36.0327356327454 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 6.0 10 11.0 11 12.0 12 18.0 13 15.0 14 17.0 15 31.0 16 43.0 17 71.0 18 124.0 19 198.0 20 297.0 21 505.0 22 747.0 23 1265.0 24 1721.0 25 2487.0 26 3478.0 27 4260.0 28 5073.0 29 5745.0 30 6718.0 31 8684.0 32 11374.0 33 16366.0 34 35469.0 35 56109.0 36 40740.0 37 62769.0 38 113745.0 39 276411.0 40 554.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.58532727999927 22.206770004854473 23.102710261256117 12.105192453890142 2 33.129791501925 24.330067504648387 23.9433889104304 18.59675208299622 3 33.054226597014654 23.78783206577658 25.260660757847305 17.897280579361468 4 30.335874553098467 25.380648667462513 24.567295509154803 19.716181270284217 5 25.483386406865872 30.31862438288661 23.595485035095702 20.602504175151818 6 26.609379818216787 34.41286832166529 23.204226749671026 15.773525110446887 7 79.65197399956647 6.500871667893006 8.546925042667457 5.300229289873081 8 80.01712804511301 6.342872321262286 8.220545716004189 5.4194539176205145 9 73.89927121847263 8.5418873823401 10.77616606570941 6.782675333477848 10 41.73594721753228 25.89571127184131 17.65287772529791 14.7154637853285 11 31.52277785749833 25.10556188231415 23.598843475313938 19.772816784873584 12 29.13095779661897 22.6993921223205 27.49539741033728 20.674252670723256 13 25.128155025600474 25.00923571060015 28.619100976084855 21.243508287714523 14 20.363902263283396 29.099052614545712 28.769620160411318 21.76742496175958 15 20.736078502013537 26.976976365740246 32.400399349073226 19.88654578317299 16 22.74412043977248 25.920136291610312 31.198841032811963 20.136902235805245 17 22.602302668738723 26.009592926514273 26.989799501118974 24.39830490362803 18 23.647082889357712 26.46191376136145 27.673852711024537 22.217150638256296 19 25.582613049677438 26.478705962452636 26.90400661918036 21.03467436868957 20 27.484253495067673 26.092180024608208 26.286053619024646 20.137512861299474 21 25.596504779671058 26.571673693948394 27.354342921171305 20.477478605209246 22 23.97132502679119 25.01060961796216 26.844470633493415 24.17359472175323 23 23.49564776678991 25.887009858548605 27.93336854607017 22.683973828591316 24 23.11477011476706 25.87846110162945 27.89077741784797 23.115991365755512 25 22.81739549907948 27.135433681491637 27.04200798087521 23.005162838553673 26 22.108764613031358 28.805799720944147 26.5266400637493 22.558795602275193 27 23.255977260306597 28.72183871548821 27.0343751621974 20.9878088620078 28 21.48058363584738 27.83017283754614 28.086635545120643 22.602607981485832 29 22.918454018373723 27.367318712923584 27.507915232968895 22.206312035733806 30 22.600318135882492 27.922529943547676 26.694714731034736 22.782437189535102 31 25.46567826753335 28.209371269459872 23.81469958752248 22.510250875484303 32 24.733690956331117 28.502166193940763 24.694000299206493 22.070142550521627 33 23.557473598080193 29.781884573462825 24.16336674472496 22.49727508373202 34 23.32787841225159 27.970769357591447 25.359734744285305 23.34161748587165 35 23.260709607886838 27.477231301884085 25.46598358028046 23.796075509948615 36 23.52251528853581 29.99361896358535 24.52516235005328 21.958703397825563 37 25.09411265429743 28.33409152665533 25.589329930113912 20.98246588893333 38 23.58540971444099 28.300049155352287 24.799791166080976 23.314749964125753 39 24.386703019237757 26.22850216619394 26.575948072407975 22.808846742160334 40 23.994376139198188 25.908076438099364 27.850018166108452 22.247529256593992 41 21.090546601411155 26.813176076914385 27.203976393218394 24.892300928456066 42 22.16051512366693 26.718376468935958 27.159706044887077 23.961402362510036 43 23.34650248982545 25.63131043284188 26.996821694302557 24.025365383030106 44 23.545261088195694 26.59228230437849 26.215831687188775 23.646624920237045 45 24.12230218023833 25.870828282951642 25.274705144214476 24.732164392595553 46 22.921201833097733 28.622764729050203 25.234403861595627 23.22162957625644 47 22.894181654978276 27.008881547813502 27.74834902131999 22.34858777588823 48 22.246613318352654 25.73893317619904 28.03778550558264 23.97666799986566 49 22.49040554692199 25.35469708395795 28.954944997908612 23.19995237121145 50 21.65293268159239 25.786714621122147 28.084651012264413 24.47570168502105 51 21.823755163601835 25.723514882469857 26.002265420583576 26.450464533344732 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 322.0 1 858.0 2 1394.0 3 1910.0 4 2426.0 5 1804.5 6 1183.0 7 1167.0 8 1151.0 9 1185.0 10 1219.0 11 1185.0 12 1151.0 13 1197.0 14 1243.0 15 1278.5 16 1314.0 17 1299.5 18 1285.0 19 1209.0 20 1133.0 21 1579.0 22 2025.0 23 2184.0 24 2343.0 25 3199.5 26 5176.0 27 6296.0 28 7073.0 29 7850.0 30 9704.0 31 11558.0 32 12076.0 33 12594.0 34 13872.5 35 15151.0 36 16338.5 37 17526.0 38 19953.0 39 22380.0 40 25946.5 41 29513.0 42 32726.0 43 35939.0 44 39990.5 45 44042.0 46 48579.0 47 53116.0 48 56794.5 49 60473.0 50 58584.5 51 56696.0 52 52519.0 53 48342.0 54 44111.5 55 39881.0 56 35827.5 57 31774.0 58 30917.0 59 30060.0 60 31015.5 61 31971.0 62 27999.5 63 24028.0 64 22067.0 65 20106.0 66 16243.0 67 12380.0 68 10331.0 69 8282.0 70 6999.0 71 5716.0 72 4508.0 73 3300.0 74 2538.0 75 1536.5 76 1297.0 77 866.0 78 435.0 79 339.0 80 243.0 81 154.0 82 65.0 83 40.0 84 15.0 85 12.5 86 10.0 87 7.5 88 5.0 89 3.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 655066.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.348119743979 #Duplication Level Percentage of deduplicated Percentage of total 1 71.83232887855877 18.208144739025887 2 10.602848685461137 5.375245562127184 3 3.8154083228360496 2.9014028111826686 4 1.9180507112208958 1.9447591641220543 5 1.179637982360533 1.495080241571029 6 0.7958342078493275 1.2103740478151654 7 0.6332778763315414 1.123668240832525 8 0.47570430523771806 0.9646567753513613 9 0.38701663625045785 0.8829129634729713 >10 7.4571793440527365 48.5773879220057 >50 0.8212012245856477 12.59794109299147 >100 0.07482055601780346 3.3962308668498107 >500 0.005474674830570985 0.9785018197143783 >1k 0.0012165944067935523 0.3436937529378111 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 1159 0.17692873695169647 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1070 0.16334231970519 No Hit ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC 871 0.1329637013674958 No Hit CCTGTCTCTTATACACATCTGACGCAAGGAGCTTCGTATGCCGTCTTCTGC 839 0.1280786974136957 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 825 0.12594150818390817 No Hit GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 775 0.11830868950609558 No Hit AGCTACCATTACATTTATTATTTTACTTCTACTCACAATTCTAGAATTTGC 693 0.10579086687448289 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 684 0.1044169595124766 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.10487492863314536 0.0 2 0.0 0.0 0.0 0.5619281110605648 0.0 3 0.0 0.0 0.0 0.8327405177493565 0.0 4 0.0 0.0 0.0 1.2252200541624814 0.0 5 0.0 0.0 0.0 2.301752800481173 0.0 6 0.0 0.0 0.0 2.9842794466511773 0.0 7 0.0 0.0 0.0 3.5381167699132607 0.0 8 0.0 0.0 0.0 4.407494817316118 0.0 9 0.0 0.0 0.0 4.789441063953861 0.0 10 0.0 0.0 0.0 5.584017488314155 0.0 11 0.0 0.0 0.0 6.793513936000342 0.0 12 0.0 0.0 0.0 7.673119960431468 0.0 13 0.0 0.0 0.0 8.055218863442768 0.0 14 0.0 0.0 0.0 8.220240403257076 0.0 15 0.0 0.0 0.0 8.498838284997237 0.0 16 0.0 0.0 0.0 9.111142999331365 0.0 17 0.0 0.0 0.0 9.782525730231763 0.0 18 0.0 0.0 0.0 10.563668393719107 0.0 19 0.0 0.0 0.0 11.011409537359594 0.0 20 0.0 0.0 0.0 11.448006765730476 0.0 21 0.0 0.0 0.0 11.992684706579185 0.0 22 0.0 0.0 0.0 12.550033126433062 0.0 23 0.0 0.0 0.0 13.079750742673257 0.0 24 0.0 0.0 0.0 13.538635801583352 0.0 25 0.0 0.0 0.0 13.947907539087664 0.0 26 0.0 0.0 0.0 14.300543762002608 0.0 27 0.0 0.0 0.0 14.657301707003569 0.0 28 0.0 0.0 0.0 15.049628587043138 0.0 29 1.5265637355625235E-4 0.0 0.0 15.43493327389912 0.0 30 1.5265637355625235E-4 0.0 0.0 15.909236626538394 0.0 31 1.5265637355625235E-4 0.0 0.0 16.32949962293876 0.0 32 1.5265637355625235E-4 0.0 0.0 16.745946210000213 0.0 33 1.5265637355625235E-4 0.0 0.0 17.173994681451944 0.0 34 1.5265637355625235E-4 0.0 0.0 17.56158921391127 0.0 35 1.5265637355625235E-4 0.0 0.0 17.99543862755814 0.0 36 1.5265637355625235E-4 0.0 0.0 18.41493834209072 0.0 37 1.5265637355625235E-4 0.0 0.0 18.838101809588654 0.0 38 1.5265637355625235E-4 0.0 0.0 19.256227616759226 0.0 39 1.5265637355625235E-4 0.0 0.0 19.672674203820684 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CAAACGG 40 6.8066583E-9 45.000004 2 CGAACGC 20 7.031061E-4 45.000004 25 TTTACGC 20 7.031061E-4 45.000004 35 CGTGCGT 20 7.031061E-4 45.000004 12 GACACGC 20 7.031061E-4 45.000004 13 CGGTTGT 20 7.031061E-4 45.000004 16 TCGATAG 20 7.031061E-4 45.000004 1 CGCTAAG 20 7.031061E-4 45.000004 2 TATAGCG 40 6.8066583E-9 45.000004 1 GTACGAC 20 7.031061E-4 45.000004 35 ACCGGTA 30 2.1640662E-6 44.999996 41 GGTCCTA 25 3.8889633E-5 44.999996 9 GTCAACG 25 3.8889633E-5 44.999996 1 TCGTAAG 30 2.1640662E-6 44.999996 1 GGTTCGT 25 3.8889633E-5 44.999996 8 GTACGAG 30 2.1640662E-6 44.999996 1 CGTAAGG 95 0.0 42.63158 2 AGACACG 150 0.0 42.0 24 AGTAGCG 65 0.0 41.538464 1 AGTACGG 60 3.6379788E-12 41.249996 2 >>END_MODULE