##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551192_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 653406 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.348862728533256 33.0 31.0 34.0 30.0 34.0 2 32.44163200215486 34.0 31.0 34.0 30.0 34.0 3 32.47351876168875 34.0 31.0 34.0 30.0 34.0 4 35.957505746809794 37.0 35.0 37.0 35.0 37.0 5 36.00124731024815 37.0 35.0 37.0 35.0 37.0 6 36.0411398120005 37.0 35.0 37.0 35.0 37.0 7 36.18693584080954 37.0 37.0 37.0 35.0 37.0 8 35.86518336225869 37.0 36.0 37.0 35.0 37.0 9 37.74588540662314 39.0 38.0 39.0 35.0 39.0 10 37.614852021560864 39.0 37.0 39.0 35.0 39.0 11 37.53419772698751 39.0 37.0 39.0 35.0 39.0 12 37.33478419237044 39.0 37.0 39.0 35.0 39.0 13 37.22758591136292 39.0 37.0 39.0 34.0 39.0 14 38.450145851124724 40.0 38.0 41.0 34.0 41.0 15 38.519813102420244 40.0 38.0 41.0 35.0 41.0 16 38.61235280973851 40.0 38.0 41.0 35.0 41.0 17 38.61845162119723 40.0 38.0 41.0 35.0 41.0 18 38.61036629599361 40.0 38.0 41.0 35.0 41.0 19 38.60615758043238 40.0 37.0 41.0 35.0 41.0 20 38.518423461064025 40.0 37.0 41.0 35.0 41.0 21 38.491313211081625 40.0 37.0 41.0 35.0 41.0 22 38.452778211403015 40.0 37.0 41.0 35.0 41.0 23 38.4191987829925 40.0 37.0 41.0 34.0 41.0 24 38.361081777639015 40.0 37.0 41.0 34.0 41.0 25 38.300617074223375 40.0 37.0 41.0 34.0 41.0 26 38.27813028959024 40.0 37.0 41.0 34.0 41.0 27 38.21327933933879 40.0 37.0 41.0 34.0 41.0 28 38.16530304282483 40.0 36.0 41.0 34.0 41.0 29 38.16616468168336 40.0 36.0 41.0 34.0 41.0 30 38.077267426378086 40.0 36.0 41.0 34.0 41.0 31 38.0074165220399 40.0 36.0 41.0 34.0 41.0 32 37.918811581160874 40.0 36.0 41.0 34.0 41.0 33 37.85984824136907 40.0 36.0 41.0 34.0 41.0 34 37.79436215767838 40.0 36.0 41.0 34.0 41.0 35 37.72750326749372 40.0 36.0 41.0 33.0 41.0 36 37.649844047957934 40.0 35.0 41.0 33.0 41.0 37 37.58879777657383 40.0 35.0 41.0 33.0 41.0 38 37.49737682237384 40.0 35.0 41.0 33.0 41.0 39 37.45371637236266 40.0 35.0 41.0 33.0 41.0 40 37.375114400541165 40.0 35.0 41.0 33.0 41.0 41 37.29385252048497 40.0 35.0 41.0 33.0 41.0 42 37.26200096111759 40.0 35.0 41.0 33.0 41.0 43 37.167955298849414 39.0 35.0 41.0 33.0 41.0 44 37.11195183392868 39.0 35.0 41.0 33.0 41.0 45 37.05535761838734 39.0 35.0 41.0 32.0 41.0 46 36.92327588053982 39.0 35.0 41.0 32.0 41.0 47 36.85899272427863 39.0 35.0 41.0 32.0 41.0 48 36.812776436090275 39.0 35.0 41.0 32.0 41.0 49 36.69846313012124 39.0 35.0 41.0 32.0 41.0 50 36.59260551632522 39.0 35.0 41.0 32.0 41.0 51 35.82591068952535 37.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 6.0 10 8.0 11 13.0 12 12.0 13 12.0 14 25.0 15 30.0 16 43.0 17 66.0 18 118.0 19 207.0 20 371.0 21 627.0 22 971.0 23 1410.0 24 2080.0 25 2888.0 26 3900.0 27 4634.0 28 5376.0 29 6041.0 30 7411.0 31 9544.0 32 12443.0 33 17904.0 34 36931.0 35 58737.0 36 39718.0 37 60106.0 38 112697.0 39 268434.0 40 635.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 45.028206046470345 20.83222376286719 22.842153270707648 11.297416919954822 2 32.54546178027138 25.4928788532704 24.059925987823803 17.901733378634418 3 33.00796135939982 24.79117118606196 24.94390929988399 17.256958154654228 4 29.512737868951312 24.641034823677774 26.12311487803908 19.72311242933184 5 26.069090274653124 30.199141115937106 23.414691631236934 20.317076978172835 6 26.322378429337963 36.00257726436549 22.608760862312252 15.066283443984291 7 79.51656397400697 6.634925299124893 9.384823524730413 4.463687202137721 8 79.39045555137236 6.914230968188233 8.452019112159974 5.243294368279447 9 73.36434008870441 8.025178832150303 10.631521596067376 7.978959483077902 10 42.63918604971488 25.28856484329804 17.54360994542444 14.528639161562642 11 32.058781217191154 25.11302314334426 23.115031083277472 19.713164556187117 12 30.805349200956222 22.84674459677444 26.20086133277013 20.147044869499208 13 25.94390011723186 26.10398435276076 28.33781752845857 19.614298001548807 14 20.31677088976838 29.485955133561674 28.006017698031542 22.191256278638395 15 19.449622439953107 26.476953073586714 34.5904384104217 19.48298607603848 16 22.28966370067003 25.82406650688852 30.497883398683207 21.388386393758246 17 22.496732506282466 25.436864675255507 27.19381211681558 24.87259070164645 18 23.545850512545034 25.76483840062687 29.20955730434064 21.479753782487457 19 25.13735717149827 27.338438887919608 26.551332555868782 20.972871384713333 20 26.368750822612586 27.07612112530341 27.365221623309242 19.18990642877476 21 25.948491443298654 27.182639890053046 27.30538134023869 19.563487326409614 22 23.052129916162386 25.266220389772975 27.09188467813274 24.589765015931903 23 22.656969786013597 26.786714538893126 27.849147390749394 22.707168284343883 24 23.748940168899583 25.575369678270476 28.856484329804132 21.819205823025804 25 22.489692472980046 27.132900524329433 26.86430794942195 23.513099053268565 26 21.964903903545423 27.957196597521296 27.054388848587248 23.023510650346033 27 22.207478964074404 28.400871739775884 28.067388423124367 21.324260873025345 28 20.68254653308969 27.850524788569437 29.323116102392692 22.143812575948186 29 22.960609483230947 26.36293514292798 28.016424703782945 22.660030670058127 30 23.322405977294363 28.28455814608375 26.713865498633314 21.679170377988573 31 24.614864265097044 27.936382586018492 24.206542333556776 23.24221081532768 32 24.900597790653897 27.69411361389397 25.84671704881804 21.5585715466341 33 23.872446840096355 28.46285464167761 25.161232067045603 22.50346645118043 34 22.24604610303548 27.059745395665175 27.39583046375454 23.298378037544804 35 24.622363431006143 26.621732888892968 26.39430920438441 22.361594475716476 36 24.968243328038003 29.429328778737872 25.21678711245382 20.385640780770302 37 23.34077128156154 28.07595889844905 27.836444721964597 20.746825098024814 38 21.94408989204262 29.442949712736034 26.279066920107862 22.33389347511348 39 22.970404312173443 26.10934089983869 27.93347474617619 22.986780041811674 40 24.204399714725607 25.304940572936275 27.904090259348706 22.586569452989412 41 21.523065291717554 25.805089025812432 27.420011447706326 25.251834234763688 42 24.02135884886273 25.40763323263025 27.81685506407961 22.754152854427414 43 24.10966535354741 25.28075958898449 27.931179083142794 22.678395974325305 44 22.50897604246058 26.45797559251063 27.043828798633623 23.989219566395168 45 23.058863861060352 25.432579437593166 26.303553992464103 25.20500270888238 46 23.48356152223885 27.552241638430015 26.431345901323223 22.532850938007915 47 22.255228755169068 25.633985607723226 29.678637784164824 22.432147852942887 48 22.3946520233974 24.485848002620116 29.293731615565203 23.825768358417278 49 22.19370498587402 24.96273373675785 30.520533940612726 22.323027336755402 50 21.191418505492756 24.60598770136791 29.640682822012653 24.56191097112668 51 21.476080721634023 24.1211436687144 27.52316324000698 26.8796123696446 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 320.0 1 761.5 2 1203.0 3 1870.5 4 2538.0 5 1876.5 6 1215.0 7 1168.5 8 1122.0 9 1151.5 10 1181.0 11 1144.0 12 1107.0 13 1179.0 14 1251.0 15 1192.5 16 1134.0 17 1175.0 18 1216.0 19 1222.0 20 1228.0 21 1579.5 22 1931.0 23 2127.0 24 2323.0 25 2940.0 26 4481.5 27 5406.0 28 6558.0 29 7710.0 30 8458.0 31 9206.0 32 10877.0 33 12548.0 34 14053.0 35 15558.0 36 16836.5 37 18115.0 38 19977.5 39 21840.0 40 25870.5 41 29901.0 42 32857.5 43 35814.0 44 40398.5 45 44983.0 46 53917.0 47 62851.0 48 63331.0 49 63811.0 50 62735.0 51 61659.0 52 56724.5 53 51790.0 54 46410.5 55 41031.0 56 36484.5 57 31938.0 58 30453.0 59 28968.0 60 27111.5 61 25255.0 62 22461.5 63 19668.0 64 17583.0 65 15498.0 66 13184.0 67 10870.0 68 8938.5 69 7007.0 70 5680.0 71 4353.0 72 3565.0 73 2777.0 74 2192.5 75 1331.0 76 1054.0 77 779.5 78 505.0 79 379.0 80 253.0 81 151.5 82 50.0 83 48.0 84 46.0 85 24.0 86 2.0 87 2.0 88 2.0 89 2.0 90 2.0 91 1.5 92 1.0 93 0.5 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 653406.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 24.556673332228936 #Duplication Level Percentage of deduplicated Percentage of total 1 70.63699832819286 17.346096931146334 2 11.608312926193722 5.7012309693365975 3 4.444935094156147 3.274584572704583 4 2.1857334357809317 2.146973678952109 5 1.3329023400650526 1.636582367437051 6 0.874854226547287 1.2890105672784922 7 0.6083470023624697 1.0457285026759113 8 0.47892380825210207 0.9408620408219135 9 0.4176807746481679 0.923116530616865 >10 5.9097126310013035 37.96133666389452 >50 1.4026690463334743 21.525422915734534 >100 0.08884830886478881 3.793115363123621 >500 0.006931428351153736 1.1138108099279493 >1k 0.0031506492505244256 1.302128086349499 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 2235 0.34205379197619856 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGC 1768 0.2705821495364291 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCG 1690 0.2586447017627631 No Hit GAATCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTC 1611 0.24655420978687065 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1111 0.1700321086736271 No Hit CTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGCT 861 0.13177105811700537 Illumina Single End Adapter 1 (95% over 21bp) GCACAAGAGTGAGGAGAGCTAAAAGGACATGTAAGAAACCAATCAAGATCA 769 0.11769099151216855 No Hit CCTGTCTCTTATACACATCTGACGCGGATACGTTCGTATGCCGTCTTCTGC 758 0.1160075052876772 No Hit CGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCG 701 0.10728398576076742 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 692 0.10590658794072903 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5304420222648704E-4 0.0 0.0 0.13773978200383835 0.0 2 1.5304420222648704E-4 0.0 0.0 0.7828210943884812 0.0 3 1.5304420222648704E-4 0.0 0.0 1.0543215091382694 0.0 4 1.5304420222648704E-4 0.0 0.0 1.4722852254188055 0.0 5 1.5304420222648704E-4 0.0 0.0 2.7854044805220646 0.0 6 1.5304420222648704E-4 0.0 0.0 3.4390562682313908 0.0 7 1.5304420222648704E-4 0.0 0.0 4.059803552462022 0.0 8 1.5304420222648704E-4 0.0 0.0 5.055049999540867 0.0 9 1.5304420222648704E-4 0.0 0.0 5.4528118811275075 0.0 10 1.5304420222648704E-4 0.0 0.0 6.643495774449576 0.0 11 1.5304420222648704E-4 0.0 0.0 7.9068756638292275 0.0 12 1.5304420222648704E-4 0.0 0.0 9.128168397596594 0.0 13 1.5304420222648704E-4 0.0 0.0 9.536796417541314 0.0 14 1.5304420222648704E-4 0.0 0.0 9.70422677477709 0.0 15 1.5304420222648704E-4 0.0 0.0 10.06939024128949 0.0 16 1.5304420222648704E-4 0.0 0.0 10.767883980251176 0.0 17 1.5304420222648704E-4 0.0 0.0 11.553459870279735 0.0 18 1.5304420222648704E-4 0.0 0.0 12.4633076525162 0.0 19 1.5304420222648704E-4 0.0 0.0 13.017327664576083 0.0 20 1.5304420222648704E-4 0.0 0.0 13.546248427470822 0.0 21 1.5304420222648704E-4 0.0 0.0 14.180769689901837 0.0 22 1.5304420222648704E-4 0.0 0.0 14.83977802468909 0.0 23 1.5304420222648704E-4 0.0 0.0 15.477819303771316 0.0 24 1.5304420222648704E-4 0.0 0.0 15.98255908271427 0.0 25 1.5304420222648704E-4 0.0 0.0 16.44505866184271 0.0 26 1.5304420222648704E-4 0.0 0.0 16.852003195562943 0.0 27 1.5304420222648704E-4 0.0 0.0 17.257264243058682 0.0 28 1.5304420222648704E-4 0.0 0.0 17.673697517316953 0.0 29 1.5304420222648704E-4 0.0 0.0 18.112781333504742 0.0 30 1.5304420222648704E-4 0.0 0.0 18.624255057345664 0.0 31 1.5304420222648704E-4 0.0 0.0 19.111088664628117 0.0 32 1.5304420222648704E-4 0.0 0.0 19.590423106001474 0.0 33 1.5304420222648704E-4 0.0 0.0 20.052157464118785 0.0 34 3.060884044529741E-4 0.0 0.0 20.50562743531587 0.0 35 4.591326066794612E-4 0.0 0.0 20.972718340511108 0.0 36 4.591326066794612E-4 0.0 0.0 21.419148278405768 0.0 37 4.591326066794612E-4 0.0 0.0 21.881188724927533 0.0 38 6.121768089059482E-4 0.0 0.0 22.33389347511348 0.0 39 6.121768089059482E-4 0.0 0.0 22.832511485967377 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTA 45 3.8380676E-10 45.000004 13 TGTTTCG 20 7.0310506E-4 45.0 42 AACCGAT 20 7.0310506E-4 45.0 33 AATCCGT 20 7.0310506E-4 45.0 10 GTCGACC 20 7.0310506E-4 45.0 40 CCGATTT 20 7.0310506E-4 45.0 40 CCGATAT 20 7.0310506E-4 45.0 10 TAGCGCG 20 7.0310506E-4 45.0 1 TCGGGAT 55 1.8189894E-12 45.0 5 ATTCGCA 20 7.0310506E-4 45.0 44 ATTCGAT 20 7.0310506E-4 45.0 11 TTATCGC 20 7.0310506E-4 45.0 31 CCGTATA 20 7.0310506E-4 45.0 13 TCAATCA 20 7.0310506E-4 45.0 28 ATTCACG 25 3.888952E-5 45.0 40 GTATGCG 20 7.0310506E-4 45.0 1 TCGTCGA 25 3.888952E-5 45.0 26 ACGTCGA 20 7.0310506E-4 45.0 17 CGTAACA 20 7.0310506E-4 45.0 15 CGTCGAT 25 3.888952E-5 45.0 27 >>END_MODULE