##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551184_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 726902 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.34562155558796 33.0 31.0 34.0 30.0 34.0 2 32.4500276515954 34.0 31.0 34.0 30.0 34.0 3 32.480334350435136 34.0 31.0 34.0 30.0 34.0 4 35.97986248490168 37.0 35.0 37.0 35.0 37.0 5 36.00918555733785 37.0 35.0 37.0 35.0 37.0 6 36.03624560119521 37.0 35.0 37.0 35.0 37.0 7 36.16589443969063 37.0 36.0 37.0 35.0 37.0 8 35.713273591213124 37.0 35.0 37.0 35.0 37.0 9 37.676109021573744 39.0 38.0 39.0 35.0 39.0 10 37.58980302709306 39.0 37.0 39.0 35.0 39.0 11 37.507207298920626 39.0 37.0 39.0 35.0 39.0 12 37.343187940052445 39.0 37.0 39.0 35.0 39.0 13 37.25245081180132 39.0 37.0 39.0 34.0 39.0 14 38.529944889407375 40.0 38.0 41.0 34.0 41.0 15 38.55682334069792 40.0 38.0 41.0 34.0 41.0 16 38.68214835012147 40.0 38.0 41.0 35.0 41.0 17 38.626948336914744 40.0 38.0 41.0 35.0 41.0 18 38.627548142665724 40.0 38.0 41.0 35.0 41.0 19 38.630127582535195 40.0 38.0 41.0 35.0 41.0 20 38.44127544015562 40.0 37.0 41.0 34.0 41.0 21 38.4777989330061 40.0 37.0 41.0 34.0 41.0 22 38.41491012543644 40.0 37.0 41.0 34.0 41.0 23 38.309025150570506 40.0 37.0 41.0 34.0 41.0 24 38.29430239564618 40.0 37.0 41.0 34.0 41.0 25 38.31747195632974 40.0 37.0 41.0 34.0 41.0 26 38.25289241190697 40.0 37.0 41.0 34.0 41.0 27 38.13035732464624 40.0 37.0 41.0 34.0 41.0 28 38.08645594591843 40.0 37.0 41.0 34.0 41.0 29 38.048369656432364 40.0 36.0 41.0 34.0 41.0 30 37.983534231574545 40.0 36.0 41.0 34.0 41.0 31 37.94663654798033 40.0 36.0 41.0 34.0 41.0 32 37.72978475778028 40.0 36.0 41.0 33.0 41.0 33 37.687037592412736 40.0 36.0 41.0 33.0 41.0 34 37.568120599475584 40.0 36.0 41.0 33.0 41.0 35 37.47369659183769 40.0 36.0 41.0 33.0 41.0 36 37.424842688560496 40.0 36.0 41.0 33.0 41.0 37 37.30648285463515 40.0 35.0 41.0 33.0 41.0 38 37.230275883131426 40.0 35.0 41.0 33.0 41.0 39 37.12711204536512 40.0 35.0 41.0 33.0 41.0 40 37.119130226633025 40.0 35.0 41.0 32.0 41.0 41 37.07104946746604 40.0 35.0 41.0 32.0 41.0 42 37.02819637310119 40.0 35.0 41.0 32.0 41.0 43 36.94684015176736 40.0 35.0 41.0 32.0 41.0 44 36.92595563088284 39.0 35.0 41.0 32.0 41.0 45 36.88704116923602 39.0 35.0 41.0 32.0 41.0 46 36.732935113674195 39.0 35.0 41.0 32.0 41.0 47 36.62897749627873 39.0 35.0 41.0 31.0 41.0 48 36.61682730271756 39.0 35.0 41.0 31.0 41.0 49 36.51548076632063 39.0 35.0 41.0 31.0 41.0 50 36.441202527988644 39.0 35.0 41.0 31.0 41.0 51 35.689672060332754 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 7.0 10 9.0 11 13.0 12 10.0 13 12.0 14 15.0 15 25.0 16 52.0 17 69.0 18 128.0 19 266.0 20 667.0 21 1410.0 22 2315.0 23 3103.0 24 3719.0 25 4485.0 26 5023.0 27 5676.0 28 5925.0 29 6651.0 30 7801.0 31 10090.0 32 13480.0 33 19116.0 34 38324.0 35 59382.0 36 45750.0 37 68656.0 38 126160.0 39 297918.0 40 645.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 46.44353709303317 19.313194901100836 22.391464048798877 11.851803957067116 2 31.009819755620427 29.6127951223136 23.289384263628385 16.08800085843759 3 30.592019281828915 28.161292718963495 24.432592013779022 16.814095985428573 4 27.860701992840852 24.14341960814525 29.631779799752923 18.364098599260974 5 28.890276818608285 28.706345559649034 23.11604590439977 19.287331717342916 6 24.46230716107536 36.78432581008169 23.31001978258417 15.443347246258782 7 76.29749264687675 6.008375269293522 13.140698471045614 4.553433612784117 8 76.5303988708244 10.21692057526324 8.339776200918418 4.912904352993939 9 71.60139881304495 7.616982756960361 9.645729410567036 11.135889019427653 10 43.251222310572814 25.058123378392132 17.41761612982218 14.273038181212874 11 32.56284891223301 24.31042974156076 23.87075561767611 19.255965728530118 12 27.339311213891282 22.29488982008579 27.82974871440717 22.536050251615762 13 26.08522194188488 23.555032177652556 30.59463311422998 19.765112766232587 14 20.622862504161496 29.362004781937596 27.779122907902305 22.23600980599861 15 19.214144410113054 25.04491664626043 34.214928559833375 21.52601038379314 16 21.708015660983186 24.61253373907349 29.04545592115581 24.633994678787513 17 21.529449636952435 27.087833022883416 28.26969797854456 23.113019361619585 18 21.526285524045882 25.209312947274874 28.78875006534581 24.475651463333435 19 22.658900374465883 26.59313084845 26.285936756261503 24.462032020822612 20 26.337250413398227 25.208900236895758 29.767836654734754 18.686012694971264 21 25.041339822974763 28.181653097666537 27.369163931313988 19.407843148044716 22 22.879287716913694 23.903359737626257 28.706070419396283 24.51128212606376 23 23.301077724369996 26.87377390624871 27.719692613309633 22.105455756071656 24 22.30589543019554 26.000753884292514 28.194171979166384 23.49917870634556 25 21.45873859199727 30.170779554878095 26.056744925725887 22.313736927398743 26 20.733193745511773 26.933479341094124 29.204486987241747 23.128839926152356 27 24.19831008856765 26.53810279790123 27.480183023296124 21.783404090235 28 20.41444376270804 26.94985018613238 30.50026000753884 22.135446043620735 29 22.313461787145997 23.90844983230202 31.574132413998036 22.203955966553952 30 23.289246693502015 26.929764947682084 28.281941719791664 21.49904663902424 31 25.709380356636796 25.34605765288856 24.890425394344767 24.054136596129876 32 25.662744083796717 26.633851605856083 26.899361949753885 20.80404236059331 33 26.243014876833463 25.005846730370806 24.892488946240345 23.858649446555383 34 23.884650200439676 24.845852673400266 28.075311389981046 23.19418573617902 35 24.41677144924625 24.10737623503581 27.636462686854625 23.839389628863312 36 25.42791187807985 26.19720402475162 27.73510046746329 20.639783629705242 37 25.05358356422186 25.15868714077001 29.09484359652333 20.692885698484805 38 24.654355057490555 25.417456548475588 25.863321328046972 24.064867065986885 39 25.003370468096115 24.421723973795643 28.710059953061073 21.864845605047172 40 24.98961345545892 23.074774866488195 28.42171296818553 23.513898709867355 41 22.763591240634913 23.996632283306415 28.383193332801394 24.856583143257275 42 22.405771341941556 23.50413123089495 29.99524007362753 24.094857353535964 43 24.114942591986267 23.49615216356538 28.52612869410182 23.86277655034654 44 23.570027321427098 23.62904490564065 29.048069753556877 23.752858019375374 45 24.002135088361293 23.58516003532801 27.284558303595258 25.128146572715444 46 25.315517084833992 25.77417588615797 27.009830761230536 21.9004762677775 47 22.336160857997363 24.866763332608794 31.22883139680452 21.56824441258932 48 23.660273324327076 24.20408803387527 28.709372102429214 23.42626653936844 49 22.290350005915517 22.692192345047886 31.485674822740894 23.531782826295704 50 22.57236876497795 23.04258345691716 29.603027643341196 24.782020134763698 51 22.32295412586566 23.005439522796745 27.742116543908256 26.929489807429334 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 244.0 1 828.5 2 1413.0 3 2621.5 4 3830.0 5 2658.0 6 1486.0 7 1458.0 8 1430.0 9 1398.5 10 1367.0 11 1395.5 12 1424.0 13 1400.0 14 1376.0 15 1365.5 16 1355.0 17 1315.0 18 1275.0 19 1467.0 20 1659.0 21 2188.0 22 2717.0 23 2800.5 24 2884.0 25 3762.5 26 5262.5 27 5884.0 28 7280.5 29 8677.0 30 10276.5 31 11876.0 32 13102.0 33 14328.0 34 16231.5 35 18135.0 36 19846.0 37 21557.0 38 23404.0 39 25251.0 40 27666.5 41 30082.0 42 32748.5 43 35415.0 44 38125.0 45 40835.0 46 43973.0 47 47111.0 48 64666.5 49 82222.0 50 73539.5 51 64857.0 52 64716.5 53 64576.0 54 56784.5 55 48993.0 56 44277.0 57 39561.0 58 35765.0 59 31969.0 60 29618.0 61 27267.0 62 26292.5 63 25318.0 64 21863.0 65 18408.0 66 15474.5 67 12541.0 68 10888.0 69 9235.0 70 7755.0 71 6275.0 72 5111.0 73 3947.0 74 3183.0 75 1937.0 76 1455.0 77 1230.5 78 1006.0 79 681.0 80 356.0 81 258.0 82 160.0 83 108.5 84 57.0 85 34.5 86 12.0 87 12.5 88 13.0 89 7.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 1.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 726902.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 25.728708460375888 #Duplication Level Percentage of deduplicated Percentage of total 1 72.15936903169306 18.56567368501107 2 10.457930983896304 5.381381147668001 3 3.706936964856121 2.861241013493214 4 1.8557905077250525 1.9098837174716332 5 1.1637756314761325 1.4971221967769632 6 0.828895443663906 1.2795845528497538 7 0.6139936167409427 1.105808393316164 8 0.5226722051596318 1.0758144629515152 9 0.46180040027678704 1.069337507904571 >10 7.632993659475365 48.763380670378325 >50 0.5207536346830138 8.085134654214889 >100 0.06536430476829573 3.013509756801709 >500 0.0037814060609757854 0.6557392783225929 >1k 0.0043216069268294695 1.804742375798828 >5k 0.001620602597561051 2.9316465870407917 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GAATGATACCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCG 7488 1.0301251062729226 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGC 7212 0.9921557513942734 No Hit GAATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTC 6393 0.8794858178956724 No Hit GCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 2719 0.37405317360524526 No Hit GAATGATACGGCGACCACCTGTCTCTTATACACATCTGACGCTGGTGGCTT 2157 0.2967387625842273 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2093 0.28793427449642456 No Hit GAATGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCT 1507 0.20731818044248057 No Hit CCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGC 1184 0.16288302962435103 No Hit GAACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCT 1165 0.16026919722328456 No Hit GAATGATACGGCGACTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTA 1144 0.1573802245694743 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCAT 1016 0.13977124839386876 No Hit CTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTCTTCTGCT 891 0.12257498259737902 No Hit GAATGATCTGTCTCTTATACACATCTGACGCTGGTGGCTTCGTATGCCGTC 841 0.1156964762787831 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.12725236689402422 0.0 2 0.0 0.0 0.0 0.7862132722155118 0.0 3 0.0 0.0 0.0 1.0240720207125582 0.0 4 0.0 0.0 0.0 1.459481470679679 0.0 5 0.0 0.0 0.0 3.1211910271260774 0.0 6 0.0 0.0 0.0 3.69155677106405 0.0 7 0.0 0.0 0.0 4.368952073319375 0.0 8 0.0 0.0 0.0 5.146498427573456 0.0 9 0.0 0.0 0.0 5.4519041081191135 0.0 10 0.0 0.0 0.0 7.2573744466241665 0.0 11 0.0 0.0 0.0 8.464965015916864 0.0 12 0.0 0.0 0.0 10.478578955622629 0.0 13 0.0 0.0 0.0 10.925957006584106 0.0 14 0.0 0.0 0.0 11.1170419121147 0.0 15 1.3757012637191808E-4 0.0 0.0 11.553139212713681 0.0 16 1.3757012637191808E-4 0.0 0.0 12.17426833328289 0.0 17 1.3757012637191808E-4 0.0 0.0 12.861981395016109 0.0 18 1.3757012637191808E-4 0.0 0.0 13.550244737254816 0.0 19 1.3757012637191808E-4 0.0 0.0 14.31499706975631 0.0 20 1.3757012637191808E-4 0.0 0.0 14.789614005739425 0.0 21 1.3757012637191808E-4 0.0 0.0 15.322285535051492 0.0 22 2.7514025274383617E-4 0.0 0.0 15.921678575653939 0.0 23 2.7514025274383617E-4 0.0 0.0 16.45008543104848 0.0 24 4.1271037911575425E-4 0.0 0.0 16.922913955388758 0.0 25 4.1271037911575425E-4 0.0 0.0 17.32104190110909 0.0 26 4.1271037911575425E-4 0.0 0.0 17.69688348635717 0.0 27 4.1271037911575425E-4 0.0 0.0 18.107943023956462 0.0 28 4.1271037911575425E-4 0.0 0.0 18.473329279600275 0.0 29 4.1271037911575425E-4 0.0 0.0 18.85164712712305 0.0 30 4.1271037911575425E-4 0.0 0.0 19.301914150738337 0.0 31 4.1271037911575425E-4 0.0 0.0 19.682157980030322 0.0 32 4.1271037911575425E-4 0.0 0.0 20.084137889289064 0.0 33 4.1271037911575425E-4 0.0 0.0 20.450487135817482 0.0 34 4.1271037911575425E-4 0.0 0.0 20.837334331175317 0.0 35 4.1271037911575425E-4 0.0 0.0 21.266277985202958 0.0 36 4.1271037911575425E-4 0.0 0.0 21.652024619549817 0.0 37 4.1271037911575425E-4 0.0 0.0 22.048089013374568 0.0 38 4.1271037911575425E-4 0.0 0.0 22.43411078797417 0.0 39 4.1271037911575425E-4 0.0 0.0 22.823159105353955 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATGCG 35 1.2111013E-7 45.000004 1 CGCATCG 25 3.8893864E-5 45.0 21 ATCGTGT 20 7.0315733E-4 45.0 42 CGTAAGC 25 3.8893864E-5 45.0 43 TAGGCCG 25 3.8893864E-5 45.0 29 GAACCCG 20 7.0315733E-4 45.0 45 GACGCAC 25 3.8893864E-5 45.0 33 CGCCCAC 20 7.0315733E-4 45.0 34 AATCGTC 25 3.8893864E-5 45.0 40 AGGTCGA 25 3.8893864E-5 45.0 11 ATCCCGT 30 2.1643973E-6 44.999996 28 CGAAAGG 80 0.0 42.1875 2 GCTACGG 140 0.0 41.785717 2 CGGGTAT 65 0.0 41.53846 6 TACGAGG 65 0.0 41.53846 2 CGTAAGG 120 0.0 41.249996 2 TACGGCT 850 0.0 40.764706 7 CCGATGA 910 0.0 40.54945 18 ACGGCTG 860 0.0 40.2907 8 CTACGGG 215 0.0 39.767445 3 >>END_MODULE