SRR3551182_1.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR3551182_1.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	521084
Sequences flagged as poor quality	0
Sequence length	51
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	1604	0.30781985246140736	No Hit
CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	1158	0.22222904560493126	No Hit
CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	973	0.18672613244697592	No Hit
CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT	941	0.1805850880088431	No Hit
CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA	652	0.12512378042695613	No Hit
TCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC	615	0.11802319779536505	No Hit
ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC	525	0.10075151031311651	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGGCGC	45	3.8380676E-10	45.000004	6
GCATAAC	25	3.88786E-5	45.0	9
GTTTCGA	20	7.0297334E-4	45.0	23
CGCATTG	25	3.88786E-5	45.0	18
TTTCGAA	20	7.0297334E-4	45.0	24
CTAAGTC	25	3.88786E-5	45.0	29
ATATGCG	25	3.88786E-5	45.0	1
TAACGAC	25	3.88786E-5	45.0	32
ACGATAG	20	7.0297334E-4	45.0	1
TTAACGA	25	3.88786E-5	45.0	31
TCGAGTA	20	7.0297334E-4	45.0	43
TCATACG	20	7.0297334E-4	45.0	18
ATACGTA	20	7.0297334E-4	45.0	20
ACGAGTC	25	3.88786E-5	45.0	40
CGTCCAA	25	3.88786E-5	45.0	37
TTCGAAC	20	7.0297334E-4	45.0	25
ATACCGG	50	2.1827873E-11	45.0	2
TGCAACG	20	7.0297334E-4	45.0	12
TACGAAT	105	0.0	42.85714	12
CGAATAT	105	0.0	42.85714	14