##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR3551182_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 521084 Sequences flagged as poor quality 0 Sequence length 51 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.3523673726309 33.0 31.0 34.0 30.0 34.0 2 32.44699702926975 34.0 31.0 34.0 31.0 34.0 3 32.4714997965779 34.0 31.0 34.0 30.0 34.0 4 35.96814717012996 37.0 35.0 37.0 35.0 37.0 5 36.0139344136454 37.0 35.0 37.0 35.0 37.0 6 36.044547520169495 37.0 35.0 37.0 35.0 37.0 7 36.181176163536016 37.0 37.0 37.0 35.0 37.0 8 35.867844723691384 37.0 36.0 37.0 35.0 37.0 9 37.73486040638362 39.0 38.0 39.0 35.0 39.0 10 37.608161064243 39.0 37.0 39.0 35.0 39.0 11 37.53923551673051 39.0 37.0 39.0 35.0 39.0 12 37.34362789876488 39.0 37.0 39.0 35.0 39.0 13 37.276228016979985 39.0 37.0 39.0 34.0 39.0 14 38.5166192015107 40.0 38.0 41.0 34.0 41.0 15 38.61679306983135 40.0 38.0 41.0 35.0 41.0 16 38.669212641339975 40.0 38.0 41.0 35.0 41.0 17 38.66339783988762 40.0 38.0 41.0 35.0 41.0 18 38.667297403105835 40.0 38.0 41.0 35.0 41.0 19 38.66617090526671 40.0 38.0 41.0 35.0 41.0 20 38.59968450384199 40.0 38.0 41.0 35.0 41.0 21 38.52662718486847 40.0 37.0 41.0 35.0 41.0 22 38.51282134934099 40.0 37.0 41.0 35.0 41.0 23 38.48837999247722 40.0 37.0 41.0 35.0 41.0 24 38.44204389311512 40.0 37.0 41.0 35.0 41.0 25 38.355789085828775 40.0 37.0 41.0 34.0 41.0 26 38.34313277705706 40.0 37.0 41.0 34.0 41.0 27 38.30284368739013 40.0 37.0 41.0 34.0 41.0 28 38.23453608247423 40.0 37.0 41.0 34.0 41.0 29 38.218709459511324 40.0 37.0 41.0 34.0 41.0 30 38.13342570487676 40.0 36.0 41.0 34.0 41.0 31 38.09397525159091 40.0 36.0 41.0 34.0 41.0 32 38.01496687674156 40.0 36.0 41.0 34.0 41.0 33 37.98778507879727 40.0 36.0 41.0 34.0 41.0 34 37.924428690959616 40.0 36.0 41.0 34.0 41.0 35 37.83285036577596 40.0 36.0 41.0 34.0 41.0 36 37.79852384644318 40.0 36.0 41.0 34.0 41.0 37 37.74036047930852 40.0 36.0 41.0 33.0 41.0 38 37.6579591774071 40.0 36.0 41.0 33.0 41.0 39 37.590369307059895 40.0 35.0 41.0 33.0 41.0 40 37.50865695358138 40.0 35.0 41.0 33.0 41.0 41 37.43147937760514 40.0 35.0 41.0 33.0 41.0 42 37.38721779981731 40.0 35.0 41.0 33.0 41.0 43 37.32428168970838 40.0 35.0 41.0 33.0 41.0 44 37.26118053903018 40.0 35.0 41.0 33.0 41.0 45 37.170696087387064 39.0 35.0 41.0 33.0 41.0 46 37.03868857996024 39.0 35.0 41.0 32.0 41.0 47 36.98250378058048 39.0 35.0 41.0 32.0 41.0 48 36.926343929193756 39.0 35.0 41.0 32.0 41.0 49 36.81036646682684 39.0 35.0 41.0 32.0 41.0 50 36.71577902986851 39.0 35.0 41.0 32.0 41.0 51 35.88156228170506 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 4.0 10 5.0 11 9.0 12 10.0 13 13.0 14 17.0 15 26.0 16 31.0 17 64.0 18 103.0 19 152.0 20 270.0 21 430.0 22 678.0 23 1028.0 24 1500.0 25 2071.0 26 3083.0 27 3547.0 28 4157.0 29 4659.0 30 5682.0 31 7145.0 32 9562.0 33 13515.0 34 27654.0 35 46033.0 36 31710.0 37 48623.0 38 90469.0 39 218365.0 40 463.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.44523339807018 21.273729379524223 22.51748278588481 11.763554436520792 2 32.07045313231648 25.045865925647306 24.474748792900954 18.408932149135264 3 32.53333435684074 23.995555419087903 26.06969317806726 17.4014170460041 4 29.29489295391914 26.21266436889254 25.16734346093912 19.325099216249203 5 26.236460916090305 30.581825578985345 23.273598882329914 19.90811462259444 6 26.118821533572323 34.86136592180915 23.588327409784217 15.431485134834308 7 78.72320009825671 7.070836947593861 9.295430295307474 4.9105326588419524 8 79.11277260480077 6.57763431615632 8.738514327824305 5.5710787512186135 9 72.777517636312 9.011406990043831 11.362083656377859 6.848991717266315 10 42.457262168863366 23.921670978191617 18.70504563563648 14.916021217308534 11 32.17312371901651 25.418742467625183 23.51501869180401 18.8931151215543 12 28.872504241158815 23.464163167550723 27.89281574563794 19.770516845652526 13 24.24081338133583 26.533917756062365 28.6959492135625 20.52931964903931 14 19.785293733831782 29.989598605982913 28.709574655909602 21.515533004275703 15 20.18177491536873 26.958993175764366 33.237251575561714 19.621980333305185 16 23.02546230550161 26.068733639873802 30.052544311473774 20.85325974315082 17 22.191239800109003 25.913288452533568 27.772489656178273 24.122982091179157 18 23.217945667109333 25.857827144951678 29.40082597047693 21.52340121746206 19 24.56878353585986 26.935196628566604 27.00351574794083 21.492504087632707 20 26.12457876273307 26.68552479062877 27.094479968680673 20.09541647795749 21 24.435407726969164 27.709160135410034 27.67288959169731 20.1825425459235 22 22.930659931987933 25.685877900683955 26.951892593132776 24.43156957419533 23 22.16302937722133 27.142264970714898 27.5350999071167 23.159605744947072 24 21.866915890720115 26.505707333174687 29.020081215312693 22.6072955607925 25 22.59885162469007 26.473274942235804 27.73698674302032 23.190886690053812 26 21.220762871245327 28.20927144184047 27.574824788325873 22.99514089858833 27 22.74681241412133 27.869019198440174 27.59420745983373 21.789960927604763 28 21.08738706235463 27.015605929178406 29.430379746835445 22.466627261631523 29 22.38410697699411 25.776650213785107 28.698444012865487 23.14079879635529 30 22.67216034267028 26.0090503642407 27.822769457515488 23.496019835573534 31 24.27190241880388 26.67247507119773 26.078329021808383 22.977293488190004 32 24.643627514949603 27.36065586354599 26.41013732910625 21.585579292398155 33 22.670241266283362 27.421874400288633 25.508171427255487 24.399712906172518 34 22.09758887242748 26.344313009035012 28.431884302722786 23.126213815814726 35 22.165716084163016 26.27119619869349 27.91680420047439 23.646283516669097 36 23.677756369414528 27.78592319088669 25.823859492903257 22.712460946795527 37 22.478141719953022 27.755985599250792 28.29870040147078 21.467172279325407 38 21.656777026352756 28.482931734614763 26.544664583829096 23.315626655203385 39 22.647404257279057 25.609882475762063 28.59519770324938 23.147515563709497 40 22.912428706312227 25.13606251583238 29.724190341672358 22.227318436183033 41 20.627576360049435 27.33359688649047 27.109640672137314 24.929186081322783 42 22.564883972641645 26.667677380230444 27.551412056405493 23.216026590722414 43 23.319272900338525 24.9311051577097 27.512262898112393 24.237359043839383 44 22.43611394707955 25.72675422772528 27.512838621028475 24.3242932041667 45 22.126183110592535 25.1907561928595 26.97971920074307 25.7033414958049 46 22.609214637179416 26.352181222221372 27.46985130996154 23.56875283063767 47 21.772497332483823 25.858210960229062 29.24634032133015 23.122951385956966 48 21.655625580520606 25.441963291906873 28.671768851087347 24.230642276485174 49 22.257447935457623 24.881209171649868 29.312932271956154 23.548410620936355 50 20.979151154132538 24.75896400580329 29.029292781969897 25.232592058094284 51 20.534693062922678 25.182312256757065 27.20290778454146 27.0800868957788 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 183.0 1 561.0 2 939.0 3 1441.5 4 1944.0 5 1422.0 6 900.0 7 886.5 8 873.0 9 855.5 10 838.0 11 857.0 12 876.0 13 944.5 14 1013.0 15 1022.0 16 1031.0 17 1038.5 18 1046.0 19 1090.5 20 1135.0 21 1899.5 22 2664.0 23 2382.5 24 2101.0 25 2935.0 26 4441.0 27 5113.0 28 5481.5 29 5850.0 30 7116.0 31 8382.0 32 9749.0 33 11116.0 34 11866.5 35 12617.0 36 14161.0 37 15705.0 38 17318.0 39 18931.0 40 21348.0 41 23765.0 42 26893.5 43 30022.0 44 33214.0 45 36406.0 46 40645.0 47 44884.0 48 48138.0 49 51392.0 50 49986.0 51 48580.0 52 43339.0 53 38098.0 54 33555.0 55 29012.0 56 26991.0 57 24970.0 58 23991.5 59 23013.0 60 21765.0 61 20517.0 62 18168.5 63 15820.0 64 13943.5 65 12067.0 66 10340.0 67 8613.0 68 7392.5 69 6172.0 70 5112.5 71 4053.0 72 3512.0 73 2971.0 74 2315.5 75 1383.5 76 1107.0 77 853.0 78 599.0 79 393.0 80 187.0 81 150.5 82 114.0 83 71.5 84 29.0 85 17.5 86 6.0 87 3.0 88 0.0 89 0.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 521084.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 27.271739135203067 #Duplication Level Percentage of deduplicated Percentage of total 1 71.82453933583292 19.58780100272967 2 10.80500551482753 5.893425835096138 3 3.951625803394225 3.233031242103136 4 1.89646679598472 2.0687979095467863 5 1.1571222733032254 1.5778368392529354 6 0.835669004489518 1.3674088256287786 7 0.588495074024241 1.1234498898798784 8 0.44123737869529445 0.9626648550783101 9 0.45033881481598237 1.1053370412106194 >10 7.553853888436509 51.90318377779748 >50 0.4325380985399907 7.063909866119684 >100 0.05743538685531024 2.7616331352639056 >500 0.004254473100393351 0.8174093734864876 >1k 0.001418157700131117 0.5341104068061695 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1604 0.30781985246140736 No Hit CCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 1158 0.22222904560493126 No Hit CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 973 0.18672613244697592 No Hit CTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGCT 941 0.1805850880088431 No Hit CAAGGAAGGTGAAATAATCTATATCTTTTATTTTGTTTTGGTTTAATATAA 652 0.12512378042695613 No Hit TCTGTCTCTTATACACATCTGACGCGCGTCTAATCGTATGCCGTCTTCTGC 615 0.11802319779536505 No Hit ATCCGCTAGTTCTGGCCCCTGGCCTCTGGCATAATATCTTCACAATGGTGC 525 0.10075151031311651 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.919076386916505E-4 0.0 0.0 0.18730185536305088 0.0 2 3.83815277383301E-4 0.0 0.0 0.94879136569152 0.0 3 3.83815277383301E-4 0.0 0.0 1.2825187493763002 0.0 4 3.83815277383301E-4 0.0 0.0 1.7267849329474712 0.0 5 5.757229160749514E-4 0.0 0.0 2.9642053872312335 0.0 6 5.757229160749514E-4 0.0 0.0 3.6596786698497747 0.0 7 7.67630554766602E-4 0.0 0.0 4.325214360832419 0.0 8 7.67630554766602E-4 0.0 0.0 5.3384866931243335 0.0 9 7.67630554766602E-4 0.0 0.0 5.764713558658489 0.0 10 7.67630554766602E-4 0.0 0.0 6.74037199376684 0.0 11 7.67630554766602E-4 0.0 0.0 8.059545102133246 0.0 12 7.67630554766602E-4 0.0 0.0 9.049020887227396 0.0 13 7.67630554766602E-4 0.0 0.0 9.4717934152651 0.0 14 7.67630554766602E-4 0.0 0.0 9.638753060926836 0.0 15 9.595381934582524E-4 0.0 0.0 9.9751671515533 0.0 16 9.595381934582524E-4 0.0 0.0 10.655095915437817 0.0 17 9.595381934582524E-4 0.0 0.0 11.431938036861618 0.0 18 9.595381934582524E-4 0.0 0.0 12.312026467901529 0.0 19 9.595381934582524E-4 0.0 0.0 12.836893859723192 0.0 20 9.595381934582524E-4 0.0 0.0 13.324723077277367 0.0 21 9.595381934582524E-4 0.0 0.0 13.954563947463365 0.0 22 0.0011514458321499029 0.0 0.0 14.579990941959453 0.0 23 0.0011514458321499029 0.0 0.0 15.181621389257778 0.0 24 0.0011514458321499029 0.0 0.0 15.692479523454951 0.0 25 0.0011514458321499029 0.0 0.0 16.178581572260903 0.0 26 0.0011514458321499029 0.0 0.0 16.617474341948707 0.0 27 0.0011514458321499029 0.0 0.0 17.04350929984417 0.0 28 0.0011514458321499029 0.0 0.0 17.463978936217575 0.0 29 0.0011514458321499029 0.0 0.0 17.919183855194174 0.0 30 0.0011514458321499029 0.0 0.0 18.420446607456764 0.0 31 0.0011514458321499029 0.0 0.0 18.90155905765673 0.0 32 0.0011514458321499029 0.0 0.0 19.38535821479838 0.0 33 0.0011514458321499029 0.0 0.0 19.857451005979843 0.0 34 0.0011514458321499029 0.0 0.0 20.299606205525404 0.0 35 0.0011514458321499029 0.0 0.0 20.773042350177708 0.0 36 0.0011514458321499029 0.0 0.0 21.22229813235486 0.0 37 0.0011514458321499029 0.0 0.0 21.667140038842106 0.0 38 0.0011514458321499029 0.0 0.0 22.09106401271196 0.0 39 0.0011514458321499029 0.0 0.0 22.550874715017155 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGGGCGC 45 3.8380676E-10 45.000004 6 GCATAAC 25 3.88786E-5 45.0 9 GTTTCGA 20 7.0297334E-4 45.0 23 CGCATTG 25 3.88786E-5 45.0 18 TTTCGAA 20 7.0297334E-4 45.0 24 CTAAGTC 25 3.88786E-5 45.0 29 ATATGCG 25 3.88786E-5 45.0 1 TAACGAC 25 3.88786E-5 45.0 32 ACGATAG 20 7.0297334E-4 45.0 1 TTAACGA 25 3.88786E-5 45.0 31 TCGAGTA 20 7.0297334E-4 45.0 43 TCATACG 20 7.0297334E-4 45.0 18 ATACGTA 20 7.0297334E-4 45.0 20 ACGAGTC 25 3.88786E-5 45.0 40 CGTCCAA 25 3.88786E-5 45.0 37 TTCGAAC 20 7.0297334E-4 45.0 25 ATACCGG 50 2.1827873E-11 45.0 2 TGCAACG 20 7.0297334E-4 45.0 12 TACGAAT 105 0.0 42.85714 12 CGAATAT 105 0.0 42.85714 14 >>END_MODULE